Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3640

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
4,324,568	+		Echvi_3639	0.30	+0.8
4,324,815	+		Echvi_3639	0.53	+0.4
4,325,022	+		Echvi_3639	0.73	-0.5
4,325,045	-		Echvi_3639	0.75	-2.0
4,325,045	-		Echvi_3639	0.75	+0.3
4,325,066	+		Echvi_3639	0.77	-0.5
4,325,066	+		Echvi_3639	0.77	-0.7
4,325,091	+		Echvi_3639	0.80	-0.7
4,325,092	-		Echvi_3639	0.80	+1.8
4,325,095	+		Echvi_3639	0.80	+3.8
4,325,095	+		Echvi_3639	0.80	+0.4
4,325,128	+		Echvi_3639	0.83	-1.0
4,325,212	+				-0.2
4,325,212	+				+0.8
4,325,213	-				-0.5
4,325,213	-				-1.0
4,325,280	-				+1.8
4,325,280	-				+0.8
4,325,297	-				-0.5
4,325,314	+				+0.2
4,325,314	+				+0.5
4,325,315	-				+1.8
4,325,359	-				-0.5
4,325,364	-				+1.4
4,325,426	-				+1.4
4,325,435	+				+0.9
4,325,436	-				+0.1
4,325,489	-				+0.4
4,325,526	+				+0.3
4,325,530	-				+1.4
4,325,552	+				-0.4
4,325,608	+				-0.7
4,325,608	+				-0.6
4,325,609	-				+0.6
4,325,609	-				+1.3
4,325,632	-				+0.8
4,325,638	+				+2.3
4,325,693	+		Echvi_3640	0.10	+0.7
4,325,694	-		Echvi_3640	0.10	-0.1
4,325,694	-		Echvi_3640	0.10	+2.1
4,325,721	-		Echvi_3640	0.12	+1.6
4,325,724	+		Echvi_3640	0.12	+1.8
4,325,725	-		Echvi_3640	0.12	+0.5
4,325,776	+		Echvi_3640	0.16	+0.5
4,325,834	-		Echvi_3640	0.21	+0.3
4,325,834	-		Echvi_3640	0.21	+1.3
4,325,838	+		Echvi_3640	0.21	+2.1
4,325,839	-		Echvi_3640	0.21	+0.8
4,325,839	-		Echvi_3640	0.21	+0.5
4,325,843	+		Echvi_3640	0.21	+0.8
4,325,843	+		Echvi_3640	0.21	-1.5
4,325,843	+		Echvi_3640	0.21	+1.4
4,325,844	-		Echvi_3640	0.22	+0.3
4,325,844	-		Echvi_3640	0.22	+0.9
4,325,844	-		Echvi_3640	0.22	+3.3
4,325,920	-		Echvi_3640	0.27	-1.0
4,325,934	-		Echvi_3640	0.28	-0.3
4,325,972	+		Echvi_3640	0.31	+1.6
4,325,976	+		Echvi_3640	0.32	-1.0
4,325,976	+		Echvi_3640	0.32	+1.3
4,325,977	-		Echvi_3640	0.32	+0.6
4,325,977	-		Echvi_3640	0.32	+0.2
4,325,981	+		Echvi_3640	0.32	+1.3
4,325,983	+		Echvi_3640	0.32	+1.2
4,325,985	+		Echvi_3640	0.32	-2.1
4,325,985	+		Echvi_3640	0.32	-0.7
4,325,985	+		Echvi_3640	0.32	+0.8
4,325,991	+		Echvi_3640	0.33	+1.0
4,325,992	-		Echvi_3640	0.33	+0.7
4,326,067	+		Echvi_3640	0.39	+1.5
4,326,068	-		Echvi_3640	0.39	+2.6
4,326,068	-		Echvi_3640	0.39	-0.4
4,326,111	-		Echvi_3640	0.42	+1.2
4,326,124	+		Echvi_3640	0.43	+1.8
4,326,125	-		Echvi_3640	0.43	+0.6
4,326,130	-		Echvi_3640	0.43	+0.0
4,326,135	+		Echvi_3640	0.44	+1.1
4,326,135	+		Echvi_3640	0.44	+0.3
4,326,135	+		Echvi_3640	0.44	+0.2
4,326,136	-		Echvi_3640	0.44	+0.4
4,326,141	+		Echvi_3640	0.44	+0.6
4,326,142	-		Echvi_3640	0.44	-0.4
4,326,243	+		Echvi_3640	0.52	+3.0
4,326,300	-		Echvi_3640	0.56	+2.8
4,326,335	-		Echvi_3640	0.59	+1.0
4,326,490	+		Echvi_3640	0.71	+0.3
4,326,511	+		Echvi_3640	0.72	+0.8
4,326,511	+		Echvi_3640	0.72	+0.8
4,326,511	+		Echvi_3640	0.72	+1.0
4,326,512	-		Echvi_3640	0.72	+0.8
4,326,549	-		Echvi_3640	0.75	+0.3
4,326,572	+		Echvi_3640	0.77	+0.6
4,326,579	-		Echvi_3640	0.78	+0.8
4,326,596	-		Echvi_3640	0.79	+1.3
4,326,678	-		Echvi_3640	0.85	+1.4
4,326,678	-		Echvi_3640	0.85	+1.1
4,326,768	-				-1.5
4,326,772	+				+0.8
4,326,772	+				+1.8
4,326,772	+				+0.5
4,326,773	-				+0.6
4,326,773	-				+1.6
4,326,775	+				+1.1
4,326,776	-				+0.1
4,326,903	+				+0.8
4,326,904	-				+0.8
4,326,905	+				-0.0
4,326,910	+				+0.3
4,326,936	+				-0.2
4,326,938	+				+0.7
4,326,956	+				-0.5
4,326,956	+				-1.2
4,326,957	-				+1.8
4,326,960	+				-1.6
4,326,960	+				+0.5
4,326,961	-				-0.7
4,326,964	-				+1.2
4,327,010	+				-1.5
4,327,071	+				+0.5
4,327,144	-				+1.8
4,327,144	-				-0.6
4,327,145	+				-2.3
4,327,145	+				-0.3
4,327,146	-				+2.0
4,327,146	-				+1.0
4,327,148	+				-1.0
4,327,150	+				-0.2
4,327,151	-				+0.6
4,327,153	+				-1.2
4,327,153	+				+0.3
4,327,153	+				-1.9
4,327,154	-				+0.3
4,327,175	+				-0.5
4,327,175	+				-1.0
4,327,175	+				-0.1
4,327,175	+				-2.2
4,327,204	-				+1.2
4,327,209	+				-0.2
4,327,210	-				+0.5
4,327,283	+		Echvi_3641	0.24	+0.2
4,327,317	+		Echvi_3641	0.35	+0.2
4,327,352	-		Echvi_3641	0.46	+0.5
4,327,434	-		Echvi_3641	0.71	-0.2
4,327,453	+		Echvi_3641	0.77	+0.3
4,327,454	-		Echvi_3641	0.77	+0.4
4,327,511	+				-0.7
4,327,512	-				+1.4
4,327,528	+				-0.0
4,327,529	-				+0.0
4,327,529	-				-0.6
4,327,538	-				-0.1
4,327,538	-				+1.0
4,327,538	-				-0.5
4,327,548	+				-0.5
4,327,560	+				+0.3
4,327,560	+				+0.4
4,327,561	-				-1.0
4,327,561	-				-0.5
4,327,561	-				-0.3
4,327,582	-				+0.4
4,327,587	+				-0.5
4,327,588	-				+1.8
4,327,588	-				+0.8
4,327,588	-				-1.3
4,327,604	+				-0.2
4,327,609	+				-0.9
4,327,609	+				-0.5
4,327,610	-				-0.7
4,327,682	+		Echvi_3642	0.29	+0.9
4,327,740	-		Echvi_3642	0.52	+0.4
4,327,800	-		Echvi_3642	0.75	+0.9
4,327,864	+				-0.4
4,327,864	+				-0.2
4,327,864	+				-0.2
4,327,864	+				+0.0
4,327,865	-				+0.1
4,327,865	-				-1.4