Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3628

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
4,307,570	-		Echvi_3627	0.24	+0.3
4,307,570	-		Echvi_3627	0.24	+0.0
4,307,575	+		Echvi_3627	0.25	+1.0
4,307,575	+		Echvi_3627	0.25	-0.4
4,307,586	+		Echvi_3627	0.25	+0.3
4,307,586	+		Echvi_3627	0.25	-1.1
4,307,589	+		Echvi_3627	0.26	+0.5
4,307,589	+		Echvi_3627	0.26	+0.5
4,307,590	-		Echvi_3627	0.26	+0.7
4,307,607	+		Echvi_3627	0.27	+0.8
4,307,615	-		Echvi_3627	0.28	-1.0
4,307,649	+		Echvi_3627	0.30	-1.3
4,307,715	+		Echvi_3627	0.35	+1.4
4,307,798	-		Echvi_3627	0.42	+0.3
4,307,864	-		Echvi_3627	0.47	+2.0
4,307,870	-		Echvi_3627	0.47	+0.3
4,307,916	+		Echvi_3627	0.51	-0.3
4,307,925	+		Echvi_3627	0.52	+0.6
4,307,925	+		Echvi_3627	0.52	-0.5
4,307,926	-		Echvi_3627	0.52	+0.6
4,307,973	+		Echvi_3627	0.55	-0.3
4,307,983	+		Echvi_3627	0.56	-0.2
4,307,983	+		Echvi_3627	0.56	-0.5
4,307,983	+		Echvi_3627	0.56	-0.7
4,308,010	-		Echvi_3627	0.58	-0.1
4,308,010	-		Echvi_3627	0.58	-0.5
4,308,011	+		Echvi_3627	0.58	+0.2
4,308,025	+		Echvi_3627	0.59	+0.0
4,308,063	-		Echvi_3627	0.62	-0.9
4,308,063	-		Echvi_3627	0.62	+1.8
4,308,073	+		Echvi_3627	0.63	+0.2
4,308,074	-		Echvi_3627	0.63	+0.7
4,308,121	+		Echvi_3627	0.67	-0.0
4,308,122	-		Echvi_3627	0.67	-1.3
4,308,142	-		Echvi_3627	0.68	-0.2
4,308,172	+		Echvi_3627	0.71	-0.1
4,308,254	+		Echvi_3627	0.77	+0.1
4,308,254	+		Echvi_3627	0.77	+0.3
4,308,254	+		Echvi_3627	0.77	+1.8
4,308,254	+		Echvi_3627	0.77	+1.6
4,308,254	+		Echvi_3627	0.77	+2.0
4,308,255	-		Echvi_3627	0.77	+0.5
4,308,255	-		Echvi_3627	0.77	-0.3
4,308,255	-		Echvi_3627	0.77	+0.6
4,308,255	-		Echvi_3627	0.77	+1.3
4,308,256	+		Echvi_3627	0.77	+0.1
4,308,256	+		Echvi_3627	0.77	+0.6
4,308,256	+		Echvi_3627	0.77	-0.2
4,308,256	+		Echvi_3627	0.77	-0.3
4,308,256	+		Echvi_3627	0.77	+0.2
4,308,256	+		Echvi_3627	0.77	-0.9
4,308,256	+		Echvi_3627	0.77	+0.2
4,308,257	-		Echvi_3627	0.77	+0.7
4,308,257	-		Echvi_3627	0.77	-0.1
4,308,257	-		Echvi_3627	0.77	-1.0
4,308,257	-		Echvi_3627	0.77	+0.1
4,308,259	+		Echvi_3627	0.77	-2.0
4,308,260	-		Echvi_3627	0.77	+0.1
4,308,260	-		Echvi_3627	0.77	-2.3
4,308,260	-		Echvi_3627	0.77	+0.7
4,308,300	+		Echvi_3627	0.80	+3.1
4,308,381	+		Echvi_3627	0.87	+1.0
4,308,420	+		Echvi_3627	0.90	-0.4
4,308,491	-				-0.0
4,308,520	+				+0.5
4,308,521	-				+0.2
4,308,523	+				+0.7
4,308,524	-				-1.1
4,308,524	-				+0.2
4,308,526	+				-1.1
4,308,526	+				+0.2
4,308,526	+				-1.3
4,308,526	+				-0.1
4,308,526	+				-0.5
4,308,529	+				-0.6
4,308,535	+				+0.9
4,308,546	-				-0.9
4,308,546	-				-2.1
4,308,546	-				-0.3
4,308,609	-		Echvi_3628	0.11	+0.5
4,308,609	-		Echvi_3628	0.11	+0.3
4,308,609	-		Echvi_3628	0.11	+0.7
4,308,643	+		Echvi_3628	0.18	-0.2
4,308,645	+		Echvi_3628	0.18	-0.4
4,308,645	+		Echvi_3628	0.18	+0.2
4,308,646	-		Echvi_3628	0.18	-0.0
4,308,646	-		Echvi_3628	0.18	+0.5
4,308,646	-		Echvi_3628	0.18	+1.8
4,308,646	-		Echvi_3628	0.18	+1.7
4,308,646	-		Echvi_3628	0.18	+0.6
4,308,646	-		Echvi_3628	0.18	+0.2
4,308,646	-		Echvi_3628	0.18	+0.8
4,308,646	-		Echvi_3628	0.18	+0.3
4,308,650	-		Echvi_3628	0.19	-0.3
4,308,650	-		Echvi_3628	0.19	+0.6
4,308,650	-		Echvi_3628	0.19	+0.0
4,308,650	-		Echvi_3628	0.19	+0.7
4,308,650	-		Echvi_3628	0.19	+0.5
4,308,667	-		Echvi_3628	0.23	+0.7
4,308,693	-		Echvi_3628	0.28	+0.8
4,308,693	-		Echvi_3628	0.28	+1.6
4,308,693	-		Echvi_3628	0.28	-0.2
4,308,695	-		Echvi_3628	0.28	+2.0
4,308,698	+		Echvi_3628	0.29	-0.8
4,308,698	+		Echvi_3628	0.29	-0.1
4,308,698	+		Echvi_3628	0.29	-0.3
4,308,699	-		Echvi_3628	0.29	+0.7
4,308,699	-		Echvi_3628	0.29	+0.8
4,308,699	-		Echvi_3628	0.29	+0.4
4,308,699	-		Echvi_3628	0.29	+0.0
4,308,701	+		Echvi_3628	0.29	+1.1
4,308,701	+		Echvi_3628	0.29	-2.0
4,308,701	+		Echvi_3628	0.29	+1.0
4,308,701	+		Echvi_3628	0.29	+0.4
4,308,701	+		Echvi_3628	0.29	+0.1
4,308,701	+		Echvi_3628	0.29	+0.4
4,308,702	-		Echvi_3628	0.30	+0.7
4,308,702	-		Echvi_3628	0.30	+1.1
4,308,702	-		Echvi_3628	0.30	-0.1
4,308,702	-		Echvi_3628	0.30	+1.0
4,308,703	+		Echvi_3628	0.30	+1.3
4,308,703	+		Echvi_3628	0.30	-0.0
4,308,703	+		Echvi_3628	0.30	+0.0
4,308,703	+		Echvi_3628	0.30	-0.3
4,308,705	+		Echvi_3628	0.30	-1.9
4,308,705	+		Echvi_3628	0.30	+0.7
4,308,705	+		Echvi_3628	0.30	+0.7
4,308,814	-		Echvi_3628	0.52	-0.2
4,308,839	+		Echvi_3628	0.57	+0.5
4,308,897	+		Echvi_3628	0.69	-0.5
4,308,898	-		Echvi_3628	0.69	-0.8
4,308,898	-		Echvi_3628	0.69	-0.0
4,308,935	-		Echvi_3628	0.77	+0.3
4,308,946	-		Echvi_3628	0.79	+0.3
4,308,972	-		Echvi_3628	0.84	+0.9
4,308,997	+		Echvi_3628	0.89	-0.4
4,309,008	-				+0.2
4,309,008	-				+1.4
4,309,034	+				+0.1
4,309,035	-				-0.1
4,309,109	+				-1.8
4,309,110	-				+3.2
4,309,110	-				+1.0
4,309,110	-				+2.0
4,309,188	+		Echvi_3629	0.14	-0.9
4,309,218	+		Echvi_3629	0.17	+0.8
4,309,218	+		Echvi_3629	0.17	+0.7
4,309,220	+		Echvi_3629	0.18	-0.1
4,309,308	+		Echvi_3629	0.26	+1.1
4,309,365	-		Echvi_3629	0.32	-2.4
4,309,381	+		Echvi_3629	0.34	-1.0
4,309,382	-		Echvi_3629	0.34	+1.7
4,309,414	+		Echvi_3629	0.37	+1.0
4,309,415	-		Echvi_3629	0.37	+1.2
4,309,435	-		Echvi_3629	0.39	+0.5
4,309,479	+		Echvi_3629	0.43	-0.2
4,309,479	+		Echvi_3629	0.43	-0.2
4,309,480	-		Echvi_3629	0.43	-1.7
4,309,500	+		Echvi_3629	0.45	+0.1
4,309,503	+		Echvi_3629	0.46	+0.6
4,309,504	-		Echvi_3629	0.46	-0.6
4,309,560	+		Echvi_3629	0.51	+0.6
4,309,596	-		Echvi_3629	0.55	-0.7
4,309,648	-		Echvi_3629	0.60	-0.3
4,309,662	+		Echvi_3629	0.62	+1.3
4,309,692	+		Echvi_3629	0.64	-2.0
4,309,832	+		Echvi_3629	0.78	-1.4
4,309,835	-		Echvi_3629	0.79	+0.1
4,309,835	-		Echvi_3629	0.79	-0.2
4,309,846	-		Echvi_3629	0.80	+0.7
4,309,886	+		Echvi_3629	0.84	+1.7
4,309,886	+		Echvi_3629	0.84	+1.1
4,309,886	+		Echvi_3629	0.84	-0.9
4,309,887	-		Echvi_3629	0.84	-0.8
4,309,887	-		Echvi_3629	0.84	-0.3
4,309,903	+		Echvi_3629	0.85	-0.9
4,309,903	+		Echvi_3629	0.85	+0.3
4,309,904	-		Echvi_3629	0.86	-0.1
4,309,904	-		Echvi_3629	0.86	-1.2
4,309,904	-		Echvi_3629	0.86	-0.3
4,309,987	+				-2.3
4,310,002	+				+0.1
4,310,004	+				+0.2
4,310,005	-				-0.5
4,310,005	-				+0.3
4,310,005	-				-1.0
4,310,007	+				+0.1
4,310,007	+				-0.5
4,310,008	-				-0.0
4,310,025	+				+0.3
4,310,026	-				+1.0
4,310,030	+				+0.2
4,310,031	-				-0.9
4,310,031	-				+0.4