Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3614

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
4,287,525	-		Echvi_3613	0.33	+0.3
4,287,589	-		Echvi_3613	0.37	+0.1
4,287,716	+		Echvi_3613	0.46	+1.0
4,287,717	-		Echvi_3613	0.46	+0.6
4,287,746	-		Echvi_3613	0.49	+0.2
4,287,764	+		Echvi_3613	0.50	-0.3
4,287,765	-		Echvi_3613	0.50	+1.1
4,287,777	+		Echvi_3613	0.51	+1.3
4,287,777	+		Echvi_3613	0.51	-0.5
4,287,831	-		Echvi_3613	0.55	-0.0
4,287,864	+		Echvi_3613	0.57	-0.8
4,287,864	+		Echvi_3613	0.57	+0.5
4,287,864	+		Echvi_3613	0.57	+0.2
4,287,864	+		Echvi_3613	0.57	+3.8
4,287,864	+		Echvi_3613	0.57	-0.3
4,287,864	+		Echvi_3613	0.57	+0.8
4,287,864	+		Echvi_3613	0.57	+0.8
4,287,865	-		Echvi_3613	0.57	-0.0
4,287,865	-		Echvi_3613	0.57	+0.5
4,287,865	-		Echvi_3613	0.57	-1.6
4,287,865	-		Echvi_3613	0.57	+0.6
4,287,865	-		Echvi_3613	0.57	+1.0
4,287,868	+		Echvi_3613	0.57	-1.9
4,287,898	+		Echvi_3613	0.60	-0.3
4,287,919	+		Echvi_3613	0.61	-0.3
4,287,919	+		Echvi_3613	0.61	-0.6
4,287,920	-		Echvi_3613	0.61	-1.9
4,287,925	-		Echvi_3613	0.62	+0.9
4,287,944	+		Echvi_3613	0.63	+0.6
4,287,944	+		Echvi_3613	0.63	+1.8
4,287,946	+		Echvi_3613	0.63	+0.2
4,287,947	-		Echvi_3613	0.63	+0.9
4,287,983	+		Echvi_3613	0.66	+0.0
4,287,984	-		Echvi_3613	0.66	+0.2
4,287,985	+		Echvi_3613	0.66	-0.3
4,287,985	+		Echvi_3613	0.66	+2.2
4,287,985	+		Echvi_3613	0.66	-0.0
4,287,986	-		Echvi_3613	0.66	-0.5
4,287,998	+		Echvi_3613	0.67	+1.4
4,287,999	-		Echvi_3613	0.67	+0.4
4,288,013	+		Echvi_3613	0.68	-0.2
4,288,014	-		Echvi_3613	0.68	+0.6
4,288,014	-		Echvi_3613	0.68	-0.1
4,288,045	-		Echvi_3613	0.70	+1.1
4,288,091	+		Echvi_3613	0.74	+0.8
4,288,156	+		Echvi_3613	0.78	+0.2
4,288,163	-		Echvi_3613	0.79	-0.5
4,288,193	+		Echvi_3613	0.81	+0.1
4,288,193	+		Echvi_3613	0.81	-0.7
4,288,193	+		Echvi_3613	0.81	+4.0
4,288,193	+		Echvi_3613	0.81	-0.2
4,288,193	+		Echvi_3613	0.81	-0.8
4,288,194	-		Echvi_3613	0.81	-2.0
4,288,198	-		Echvi_3613	0.81	+1.7
4,288,205	-		Echvi_3613	0.82	+0.2
4,288,205	-		Echvi_3613	0.82	+0.6
4,288,206	+		Echvi_3613	0.82	-0.1
4,288,207	-		Echvi_3613	0.82	+0.2
4,288,207	-		Echvi_3613	0.82	+0.5
4,288,207	-		Echvi_3613	0.82	+0.3
4,288,207	-		Echvi_3613	0.82	-1.0
4,288,207	-		Echvi_3613	0.82	+1.2
4,288,207	-		Echvi_3613	0.82	+1.0
4,288,254	+		Echvi_3613	0.85	-0.2
4,288,254	+		Echvi_3613	0.85	+0.2
4,288,262	+		Echvi_3613	0.86	+0.6
4,288,262	+		Echvi_3613	0.86	-0.2
4,288,345	-				-1.0
4,288,345	-				-1.6
4,288,399	+				-0.4
4,288,658	+		Echvi_3614	0.13	+0.1
4,288,738	+		Echvi_3614	0.19	+0.6
4,288,738	+		Echvi_3614	0.19	+1.1
4,288,738	+		Echvi_3614	0.19	-0.3
4,288,739	-		Echvi_3614	0.19	-0.2
4,288,739	-		Echvi_3614	0.19	+0.4
4,288,739	-		Echvi_3614	0.19	+1.8
4,288,785	-		Echvi_3614	0.23	+1.0
4,288,790	+		Echvi_3614	0.23	+0.2
4,288,845	+		Echvi_3614	0.27	-0.2
4,288,846	-		Echvi_3614	0.27	-0.1
4,288,880	+		Echvi_3614	0.30	+0.1
4,288,902	-		Echvi_3614	0.32	-1.3
4,288,973	+		Echvi_3614	0.37	+0.7
4,288,973	+		Echvi_3614	0.37	+0.8
4,288,973	+		Echvi_3614	0.37	+0.4
4,288,974	-		Echvi_3614	0.37	+1.3
4,288,983	+		Echvi_3614	0.38	-2.2
4,289,000	-		Echvi_3614	0.39	-1.0
4,289,000	-		Echvi_3614	0.39	+1.8
4,289,144	-		Echvi_3614	0.50	-1.0
4,289,144	-		Echvi_3614	0.50	-0.1
4,289,179	+		Echvi_3614	0.53	+0.7
4,289,179	+		Echvi_3614	0.53	+0.8
4,289,179	+		Echvi_3614	0.53	-0.2
4,289,179	+		Echvi_3614	0.53	+0.2
4,289,179	+		Echvi_3614	0.53	+1.1
4,289,180	-		Echvi_3614	0.53	-0.4
4,289,180	-		Echvi_3614	0.53	+0.7
4,289,377	-		Echvi_3614	0.68	+0.7
4,289,396	+		Echvi_3614	0.70	-2.2
4,289,431	+		Echvi_3614	0.72	-1.5
4,289,466	-		Echvi_3614	0.75	+1.8
4,289,574	+		Echvi_3614	0.83	-0.2
4,289,574	+		Echvi_3614	0.83	+0.2
4,289,575	-		Echvi_3614	0.83	-2.0
4,289,575	-		Echvi_3614	0.83	+0.1
4,289,580	-		Echvi_3614	0.84	+0.8
4,289,583	-		Echvi_3614	0.84	+1.1
4,289,603	+		Echvi_3614	0.86	+0.5
4,289,604	-		Echvi_3614	0.86	-1.0
4,289,649	-		Echvi_3614	0.89	+0.8
4,289,733	+				-3.1
4,289,733	+				-0.5
4,289,734	-				-0.4
4,289,734	-				+1.7
4,289,739	+				-0.3
4,289,739	+				+2.8
4,289,739	+				+0.3
4,289,740	-				+1.8
4,289,740	-				+0.3
4,289,740	-				+2.1
4,289,740	-				-1.3
4,289,741	+				+0.0
4,289,742	-				-1.4
4,289,742	-				-1.4
4,289,742	-				-0.1
4,289,749	+				-0.4
4,289,831	-				-0.8
4,289,853	-				+0.2
4,289,874	+				-0.6
4,289,874	+				+0.4
4,289,875	-				+0.3
4,289,875	-				+1.0
4,289,897	+				+0.8
4,289,898	-				+0.1
4,289,912	+				+0.0
4,289,919	-				-1.6
4,289,940	+				-0.3
4,289,941	-				-1.0
4,289,954	+				+1.5
4,289,954	+				+1.3
4,289,954	+				-1.6
4,289,955	-				+0.7
4,289,955	-				-0.3
4,290,026	-		Echvi_3615	0.14	-1.8
4,290,026	-		Echvi_3615	0.14	-1.0
4,290,113	-		Echvi_3615	0.22	-1.3
4,290,163	+		Echvi_3615	0.26	-0.2
4,290,163	+		Echvi_3615	0.26	-1.0
4,290,173	+		Echvi_3615	0.27	-0.7
4,290,237	+		Echvi_3615	0.32	-1.8
4,290,237	+		Echvi_3615	0.32	-0.6
4,290,238	-		Echvi_3615	0.32	+0.8
4,290,254	+		Echvi_3615	0.34	-2.3
4,290,290	+		Echvi_3615	0.37	+0.1
4,290,291	-		Echvi_3615	0.37	+0.6
4,290,308	-		Echvi_3615	0.38	-0.3
4,290,309	+		Echvi_3615	0.38	+1.2
4,290,309	+		Echvi_3615	0.38	+1.1
4,290,309	+		Echvi_3615	0.38	-0.0
4,290,310	-		Echvi_3615	0.38	+0.7
4,290,310	-		Echvi_3615	0.38	+0.6
4,290,310	-		Echvi_3615	0.38	+0.5
4,290,410	-		Echvi_3615	0.47	+0.2
4,290,415	+		Echvi_3615	0.47	-0.4
4,290,429	+		Echvi_3615	0.48	+0.0
4,290,429	+		Echvi_3615	0.48	-0.8
4,290,471	-		Echvi_3615	0.52	-0.4
4,290,471	-		Echvi_3615	0.52	+0.8
4,290,622	-		Echvi_3615	0.65	+0.2
4,290,622	-		Echvi_3615	0.65	+0.1
4,290,697	+		Echvi_3615	0.71	-1.5
4,290,706	-		Echvi_3615	0.72	-1.6