Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3596

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
4,265,727	-		Echvi_3593	0.46	-0.6
4,265,766	-		Echvi_3593	0.51	-0.2
4,265,792	+		Echvi_3593	0.55	-0.9
4,265,792	+		Echvi_3593	0.55	-0.1
4,265,874	+		Echvi_3593	0.67	-0.3
4,265,893	+		Echvi_3593	0.70	-1.1
4,265,894	-		Echvi_3593	0.70	+3.1
4,265,894	-		Echvi_3593	0.70	-1.7
4,265,894	-		Echvi_3593	0.70	-0.8
4,266,031	-		Echvi_3593	0.90	+0.1
4,266,108	-				+1.0
4,266,149	-		Echvi_3594	0.28	-1.2
4,266,195	+		Echvi_3594	0.57	-0.5
4,266,284	+				+0.4
4,266,284	+				+0.9
4,266,285	-				+0.2
4,266,286	+				-0.1
4,266,286	+				+0.4
4,266,287	-				+0.7
4,266,287	-				-2.6
4,266,287	-				-1.1
4,266,291	+				-0.3
4,266,297	+				-1.6
4,266,307	-		Echvi_3595	0.10	+0.6
4,266,317	+		Echvi_3595	0.13	+0.2
4,266,342	+		Echvi_3595	0.18	+1.8
4,266,407	+		Echvi_3595	0.33	+0.3
4,266,453	+		Echvi_3595	0.43	+0.2
4,266,496	-		Echvi_3595	0.53	+1.6
4,266,593	+		Echvi_3595	0.75	+0.3
4,266,598	-		Echvi_3595	0.76	-0.0
4,266,648	+		Echvi_3595	0.87	+0.1
4,266,649	-		Echvi_3595	0.87	+1.8
4,266,691	+				+0.8
4,266,692	-				+0.2
4,266,692	-				+0.6
4,266,699	-				-0.7
4,266,699	-				-0.2
4,266,711	+				+1.5
4,266,874	+		Echvi_3596	0.38	+0.2
4,266,874	+		Echvi_3596	0.38	+0.9
4,266,875	-		Echvi_3596	0.38	-0.2
4,266,895	+		Echvi_3596	0.43	+1.5
4,266,896	-		Echvi_3596	0.43	-1.3
4,266,914	-		Echvi_3596	0.48	-0.3
4,266,914	-		Echvi_3596	0.48	-1.1
4,266,915	+		Echvi_3596	0.48	+0.6
4,266,915	+		Echvi_3596	0.48	+0.1
4,266,916	-		Echvi_3596	0.48	+0.7
4,266,916	-		Echvi_3596	0.48	-0.5
4,266,964	+		Echvi_3596	0.59	+1.2
4,266,965	-		Echvi_3596	0.59	+1.8
4,266,965	-		Echvi_3596	0.59	-2.2
4,267,003	+		Echvi_3596	0.68	-1.0
4,267,004	-		Echvi_3596	0.69	+0.2
4,267,008	+		Echvi_3596	0.69	-2.1
4,267,030	+		Echvi_3596	0.75	-1.3
4,267,030	+		Echvi_3596	0.75	+0.2
4,267,030	+		Echvi_3596	0.75	-0.1
4,267,030	+		Echvi_3596	0.75	-0.4
4,267,030	+		Echvi_3596	0.75	+0.2
4,267,031	-		Echvi_3596	0.75	-2.4
4,267,067	+		Echvi_3596	0.83	-0.3
4,267,067	+		Echvi_3596	0.83	+0.1
4,267,068	-		Echvi_3596	0.83	+1.2
4,267,103	+				-0.2
4,267,156	+				-0.1
4,267,173	-				-0.6
4,267,175	+				+0.0
4,267,175	+				+0.9
4,267,176	-				-0.0
4,267,373	+				-1.3
4,267,390	-				-0.6
4,267,390	-				+0.2
4,267,390	-				+0.3
4,267,484	-		Echvi_3597	0.11	-0.5
4,267,546	+		Echvi_3597	0.14	-1.2
4,267,550	-		Echvi_3597	0.14	+0.7
4,267,573	-		Echvi_3597	0.16	-1.2
4,267,585	+		Echvi_3597	0.16	+0.2
4,267,585	+		Echvi_3597	0.16	+3.8
4,267,791	+		Echvi_3597	0.26	-0.4
4,267,791	+		Echvi_3597	0.26	+1.7
4,267,831	+		Echvi_3597	0.28	-0.3
4,267,858	+		Echvi_3597	0.29	-0.4
4,267,858	+		Echvi_3597	0.29	+0.1
4,267,867	+		Echvi_3597	0.30	-2.3
4,267,867	+		Echvi_3597	0.30	+1.8
4,267,886	+		Echvi_3597	0.31	-0.8
4,267,887	-		Echvi_3597	0.31	-1.1
4,267,887	-		Echvi_3597	0.31	+0.7
4,267,895	+		Echvi_3597	0.31	+0.4
4,267,896	-		Echvi_3597	0.31	+1.1
4,267,896	-		Echvi_3597	0.31	-0.0
4,267,909	+		Echvi_3597	0.32	+0.2
4,267,909	+		Echvi_3597	0.32	-0.0
4,267,921	+		Echvi_3597	0.32	+0.7
4,267,933	+		Echvi_3597	0.33	-0.4
4,267,957	+		Echvi_3597	0.34	+0.4
4,267,957	+		Echvi_3597	0.34	-1.2
4,268,005	+		Echvi_3597	0.36	+0.2
4,268,006	-		Echvi_3597	0.36	-0.2
4,268,030	+		Echvi_3597	0.37	+1.3
4,268,031	-		Echvi_3597	0.38	-0.8
4,268,037	+		Echvi_3597	0.38	+1.8
4,268,037	+		Echvi_3597	0.38	+0.8
4,268,038	-		Echvi_3597	0.38	-1.8
4,268,038	-		Echvi_3597	0.38	+2.4
4,268,038	-		Echvi_3597	0.38	-0.1