Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3530

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
4,182,847	+				+0.9
4,182,847	+				+1.6
4,182,848	-				-0.4
4,182,857	+				+0.9
4,182,857	+				+0.4
4,182,860	+				-0.8
4,182,860	+				+1.4
4,182,861	-				+0.1
4,182,868	+				+0.8
4,182,875	+				-0.6
4,182,926	+		Echvi_3529	0.10	+0.6
4,182,926	+		Echvi_3529	0.10	-1.9
4,182,950	+		Echvi_3529	0.13	-0.8
4,182,968	+		Echvi_3529	0.16	-0.8
4,182,968	+		Echvi_3529	0.16	+0.6
4,182,986	+		Echvi_3529	0.19	+1.5
4,182,990	-		Echvi_3529	0.19	-1.0
4,183,022	+		Echvi_3529	0.24	+0.2
4,183,023	-		Echvi_3529	0.24	+1.5
4,183,023	-		Echvi_3529	0.24	-0.5
4,183,033	+		Echvi_3529	0.25	+0.5
4,183,033	+		Echvi_3529	0.25	-0.7
4,183,033	+		Echvi_3529	0.25	-1.0
4,183,116	-		Echvi_3529	0.37	-0.0
4,183,184	-		Echvi_3529	0.47	+0.3
4,183,254	+		Echvi_3529	0.57	+0.2
4,183,254	+		Echvi_3529	0.57	-1.0
4,183,254	+		Echvi_3529	0.57	+4.0
4,183,255	-		Echvi_3529	0.57	-0.5
4,183,298	+		Echvi_3529	0.63	-0.2
4,183,298	+		Echvi_3529	0.63	-1.9
4,183,298	+		Echvi_3529	0.63	-2.3
4,183,298	+		Echvi_3529	0.63	-0.2
4,183,299	-		Echvi_3529	0.63	-0.1
4,183,299	-		Echvi_3529	0.63	+0.5
4,183,301	+		Echvi_3529	0.64	-0.6
4,183,335	+		Echvi_3529	0.69	-0.0
4,183,344	-		Echvi_3529	0.70	+0.0
4,183,363	-		Echvi_3529	0.73	+1.1
4,183,402	+		Echvi_3529	0.78	+1.1
4,183,431	+		Echvi_3529	0.82	+0.1
4,183,431	+		Echvi_3529	0.82	-1.6
4,183,432	-		Echvi_3529	0.82	-1.2
4,183,464	+		Echvi_3529	0.87	+0.7
4,183,570	-				-1.8
4,183,646	+				-1.5
4,183,761	-				+0.4
4,183,799	+				-0.5
4,183,805	-				+0.6
4,183,805	-				-0.2
4,183,805	-				-0.3
4,183,837	+				-1.5
4,183,854	+				+2.3
4,183,854	+				-0.2
4,183,880	-				-0.1
4,183,880	-				+0.7
4,183,966	+				-0.6
4,183,985	+				+1.4
4,183,986	-				-2.0
4,183,986	-				-1.4
4,183,986	-				-1.7
4,183,987	+				-0.3
4,183,987	+				+1.1
4,183,987	+				+0.6
4,183,987	+				-1.2
4,183,987	+				+1.1
4,183,988	-				-0.3
4,183,988	-				-0.4
4,183,988	-				-1.0
4,183,988	-				-1.2
4,183,988	-				-0.2
4,183,988	-				-0.5
4,183,989	+				+0.3
4,183,989	+				+0.2
4,183,989	+				-0.6
4,183,989	+				+0.6
4,183,990	-				+1.1
4,183,990	-				-0.5
4,183,990	-				+0.4
4,183,990	-				+1.5
4,183,998	-				+0.8
4,184,076	+		Echvi_3530	0.13	+0.2
4,184,132	+		Echvi_3530	0.16	-0.5
4,184,132	+		Echvi_3530	0.16	+0.7
4,184,132	+		Echvi_3530	0.16	+0.2
4,184,133	-		Echvi_3530	0.16	-0.6
4,184,133	-		Echvi_3530	0.16	+1.3
4,184,133	-		Echvi_3530	0.16	+0.5
4,184,134	+		Echvi_3530	0.16	-1.0
4,184,134	+		Echvi_3530	0.16	+0.2
4,184,134	+		Echvi_3530	0.16	-0.8
4,184,134	+				+0.2
4,184,134	+		Echvi_3530	0.16	+0.1
4,184,134	+		Echvi_3530	0.16	-0.3
4,184,134	+		Echvi_3530	0.16	+1.0
4,184,135	-		Echvi_3530	0.16	+0.9
4,184,135	-		Echvi_3530	0.16	+0.1
4,184,135	-		Echvi_3530	0.16	-1.2
4,184,171	+		Echvi_3530	0.18	-1.1
4,184,171	+		Echvi_3530	0.18	+0.8
4,184,203	-		Echvi_3530	0.20	+1.8
4,184,253	-		Echvi_3530	0.23	-1.2
4,184,261	-		Echvi_3530	0.23	-0.2
4,184,266	+		Echvi_3530	0.23	+0.4
4,184,267	-		Echvi_3530	0.24	-0.6
4,184,267	-		Echvi_3530	0.24	+0.4
4,184,267	-		Echvi_3530	0.24	+0.4
4,184,267	-		Echvi_3530	0.24	+1.0
4,184,307	+		Echvi_3530	0.26	+0.4
4,184,308	-		Echvi_3530	0.26	+0.1
4,184,315	+		Echvi_3530	0.26	-0.0
4,184,332	+		Echvi_3530	0.27	+0.5
4,184,336	+		Echvi_3530	0.27	+0.2
4,184,338	+		Echvi_3530	0.27	-2.5
4,184,338	+		Echvi_3530	0.27	+0.8
4,184,339	-		Echvi_3530	0.27	-0.5
4,184,366	+		Echvi_3530	0.29	+0.3
4,184,367	-		Echvi_3530	0.29	-0.3
4,184,367	-		Echvi_3530	0.29	-0.3
4,184,368	+		Echvi_3530	0.29	-0.3
4,184,369	-		Echvi_3530	0.29	+1.5
4,184,384	-		Echvi_3530	0.30	+0.1
4,184,438	-		Echvi_3530	0.33	-1.4
4,184,438	-		Echvi_3530	0.33	+0.1
4,184,452	+		Echvi_3530	0.34	-0.3
4,184,452	+		Echvi_3530	0.34	-1.2
4,184,454	+		Echvi_3530	0.34	+0.4
4,184,454	+		Echvi_3530	0.34	+0.2
4,184,454	+		Echvi_3530	0.34	+0.3
4,184,454	+		Echvi_3530	0.34	+1.2
4,184,455	-		Echvi_3530	0.34	+0.4
4,184,455	-		Echvi_3530	0.34	-0.4
4,184,514	+		Echvi_3530	0.37	-0.1
4,184,589	+		Echvi_3530	0.41	+0.6
4,184,590	-		Echvi_3530	0.41	-0.1
4,184,590	-		Echvi_3530	0.41	+0.1
4,184,590	-		Echvi_3530	0.41	-0.2
4,184,593	+		Echvi_3530	0.41	-0.2
4,184,616	-		Echvi_3530	0.43	+0.0
4,184,675	-		Echvi_3530	0.46	-0.3
4,184,677	+		Echvi_3530	0.46	-0.2
4,184,713	+		Echvi_3530	0.48	-0.2
4,184,723	-		Echvi_3530	0.49	-1.4
4,184,723	-		Echvi_3530	0.49	+1.8
4,184,723	-		Echvi_3530	0.49	-0.1
4,184,797	-		Echvi_3530	0.53	-0.5
4,184,831	-		Echvi_3530	0.54	+0.0
4,184,831	-		Echvi_3530	0.54	-1.0
4,184,928	+		Echvi_3530	0.60	+0.5
4,184,928	+		Echvi_3530	0.60	-0.2
4,184,981	+		Echvi_3530	0.63	+0.7
4,184,981	+		Echvi_3530	0.63	-0.2
4,184,982	-		Echvi_3530	0.63	-0.5
4,184,982	-		Echvi_3530	0.63	-0.0
4,184,984	+		Echvi_3530	0.63	-1.0
4,184,984	+		Echvi_3530	0.63	-0.4
4,184,984	+		Echvi_3530	0.63	-1.8
4,184,984	+		Echvi_3530	0.63	-0.1
4,184,985	-		Echvi_3530	0.63	+0.1
4,184,985	-		Echvi_3530	0.63	+0.3
4,184,986	+		Echvi_3530	0.63	+1.1
4,184,993	+		Echvi_3530	0.63	+0.8
4,184,994	-		Echvi_3530	0.63	-0.3
4,185,018	+		Echvi_3530	0.65	+1.3
4,185,019	-		Echvi_3530	0.65	+0.7
4,185,019	-		Echvi_3530	0.65	-1.4
4,185,019	-		Echvi_3530	0.65	+0.4
4,185,053	+		Echvi_3530	0.67	+1.0
4,185,054	-		Echvi_3530	0.67	+1.5
4,185,153	-		Echvi_3530	0.72	+1.3
4,185,169	+		Echvi_3530	0.73	+1.1
4,185,196	-		Echvi_3530	0.74	-0.6
4,185,222	-		Echvi_3530	0.76	+0.3
4,185,329	+		Echvi_3530	0.82	-1.2
4,185,331	+		Echvi_3530	0.82	+0.7
4,185,331	+		Echvi_3530	0.82	-0.1
4,185,331	+		Echvi_3530	0.82	+0.4
4,185,331	+		Echvi_3530	0.82	+0.6
4,185,331	+		Echvi_3530	0.82	-0.1
4,185,332	-		Echvi_3530	0.82	-0.4
4,185,365	+		Echvi_3530	0.84	-0.0
4,185,365	+		Echvi_3530	0.84	-1.5
4,185,368	-		Echvi_3530	0.84	+0.6
4,185,383	-		Echvi_3530	0.85	+0.1
4,185,384	+		Echvi_3530	0.85	+0.2
4,185,385	-		Echvi_3530	0.85	+0.8
4,185,385	-		Echvi_3530	0.85	-0.2
4,185,391	+		Echvi_3530	0.85	-0.0
4,185,470	+		Echvi_3530	0.89	+0.5
4,185,470	+		Echvi_3530	0.89	+1.5
4,185,470	+		Echvi_3530	0.89	-2.2
4,185,470	+		Echvi_3530	0.89	-0.6
4,185,472	+		Echvi_3530	0.90	-1.2
4,185,472	+		Echvi_3530	0.90	-0.3
4,185,473	-		Echvi_3530	0.90	+1.1
4,185,473	-		Echvi_3530	0.90	-0.1
4,185,473	-		Echvi_3530	0.90	+0.3
4,185,478	-		Echvi_3530	0.90	-0.1
4,185,483	+				+0.1
4,185,510	+				+0.5
4,185,515	-				+1.1
4,185,526	+				-0.8
4,185,526	+				-1.2
4,185,527	-				-0.6
4,185,536	+				+0.3
4,185,537	-				-0.2
4,185,565	-				-1.2
4,185,567	-				+1.0
4,185,567	-				-0.8
4,185,567	-				-1.0
4,185,660	-				-0.5
4,185,768	+				+1.1
4,185,768	+				+0.2
4,185,768	+				+1.1
4,185,768	+				-1.3
4,185,768	+				-2.1
4,185,768	+				-1.2
4,185,773	-				-0.5
4,185,807	+				-0.6
4,185,807	+				-0.4
4,185,817	-				-0.3
4,185,822	+				+1.2
4,185,823	-				-0.9
4,185,823	-				-1.6
4,185,829	+				-0.0
4,185,830	-				-0.5
4,185,850	-				+0.0
4,185,871	+				-1.9
4,185,872	-				-1.9
4,185,872	-				+1.8
4,185,872	-				-0.9
4,185,872	-				-0.5
4,185,872	-				+2.8
4,185,874	-				+0.7
4,185,926	+				-0.8
4,185,927	-				-0.1
4,185,985	-		Echvi_3531	0.15	-0.9
4,186,005	+		Echvi_3531	0.20	+1.6
4,186,005	+		Echvi_3531	0.20	-1.0
4,186,005	+		Echvi_3531	0.20	+1.0
4,186,006	-		Echvi_3531	0.20	-1.2
4,186,011	+		Echvi_3531	0.22	-0.0
4,186,039	+		Echvi_3531	0.29	-0.6
4,186,040	-		Echvi_3531	0.29	+0.6
4,186,105	-		Echvi_3531	0.46	-0.9
4,186,135	+		Echvi_3531	0.54	-0.4
4,186,135	+		Echvi_3531	0.54	-0.5
4,186,140	-		Echvi_3531	0.55	-1.2
4,186,147	+		Echvi_3531	0.57	-1.8
4,186,213	-		Echvi_3531	0.75	-0.0
4,186,268	+		Echvi_3531	0.89	+0.6
4,186,268	+		Echvi_3531	0.89	+0.7
4,186,268	+		Echvi_3531	0.89	-0.7
4,186,268	+		Echvi_3531	0.89	-1.4
4,186,268	+		Echvi_3531	0.89	+0.6
4,186,269	-		Echvi_3531	0.89	+0.2
4,186,303	-				-1.0
4,186,316	-				+0.8
4,186,318	-				+0.2
4,186,468	+				-0.8
4,186,468	+				+0.4
4,186,534	+				+2.1
4,186,535	-				-1.1
4,186,535	-				-0.7
4,186,563	-		Echvi_3532	0.14	-2.8
4,186,602	+		Echvi_3532	0.20	+0.1
4,186,603	-		Echvi_3532	0.21	-0.1