Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3393

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
4,005,931	-		Echvi_3392	0.33	+1.0
4,005,932	+		Echvi_3392	0.33	+0.2
4,005,932	+		Echvi_3392	0.33	-0.8
4,005,932	+		Echvi_3392	0.33	-0.3
4,005,932	+		Echvi_3392	0.33	-1.6
4,005,932	+		Echvi_3392	0.33	-0.5
4,005,933	-		Echvi_3392	0.33	+0.6
4,006,087	-		Echvi_3392	0.44	+1.8
4,006,108	-		Echvi_3392	0.45	-0.5
4,006,108	-		Echvi_3392	0.45	+1.8
4,006,111	+		Echvi_3392	0.46	-1.1
4,006,112	-		Echvi_3392	0.46	-1.4
4,006,112	-		Echvi_3392	0.46	-1.3
4,006,125	+		Echvi_3392	0.47	-1.2
4,006,126	-		Echvi_3392	0.47	-1.5
4,006,206	-		Echvi_3392	0.52	-0.7
4,006,238	+		Echvi_3392	0.54	-1.8
4,006,239	-		Echvi_3392	0.54	-0.3
4,006,314	-		Echvi_3392	0.59	+0.8
4,006,335	-		Echvi_3392	0.61	-0.7
4,006,343	+		Echvi_3392	0.61	-1.4
4,006,344	-		Echvi_3392	0.61	+0.7
4,006,399	-		Echvi_3392	0.65	+0.5
4,006,415	+		Echvi_3392	0.66	-3.1
4,006,467	+		Echvi_3392	0.70	+0.1
4,006,467	+		Echvi_3392	0.70	-0.2
4,006,488	-		Echvi_3392	0.71	-0.9
4,006,491	+		Echvi_3392	0.71	-0.1
4,006,509	+		Echvi_3392	0.73	+0.5
4,006,554	+		Echvi_3392	0.76	-1.6
4,006,568	-		Echvi_3392	0.77	+0.1
4,006,741	-		Echvi_3392	0.88	-0.8
4,006,766	-				-1.3
4,006,766	-				-2.1
4,006,800	-				-1.4
4,006,801	+				-1.2
4,006,814	-				-0.7
4,006,834	-				-2.1
4,006,834	-				-1.0
4,006,841	+				+0.3
4,006,891	-				+0.6
4,006,893	+				-0.2
4,006,903	+				-0.4
4,006,908	+				-1.5
4,006,926	+				+1.8
4,006,936	+				-0.0
4,006,937	-				+0.5
4,006,939	-				-1.1
4,006,939	-				+2.1
4,006,943	+				+0.4
4,006,944	-				+0.1
4,006,945	+				+1.2
4,006,946	-				+0.5
4,007,007	+				+1.4
4,007,082	+		Echvi_3393	0.10	-0.4
4,007,083	-		Echvi_3393	0.10	-0.2
4,007,101	+		Echvi_3393	0.11	+0.3
4,007,101	+		Echvi_3393	0.11	-1.2
4,007,101	+		Echvi_3393	0.11	-0.8
4,007,101	+		Echvi_3393	0.11	+0.6
4,007,102	-		Echvi_3393	0.11	-0.2
4,007,102	-		Echvi_3393	0.11	+2.8
4,007,102	-		Echvi_3393	0.11	-0.0
4,007,102	-		Echvi_3393	0.11	-0.3
4,007,106	+		Echvi_3393	0.12	-0.5
4,007,106	+		Echvi_3393	0.12	-1.0
4,007,107	-		Echvi_3393	0.12	+1.7
4,007,128	+				-0.5
4,007,129	-		Echvi_3393	0.13	+0.0
4,007,129	-		Echvi_3393	0.13	+0.3
4,007,167	+		Echvi_3393	0.16	-2.2
4,007,168	-		Echvi_3393	0.16	-0.2
4,007,168	-		Echvi_3393	0.16	-2.4
4,007,225	-		Echvi_3393	0.19	+0.2
4,007,316	+		Echvi_3393	0.25	-1.0
4,007,317	-		Echvi_3393	0.25	-0.7
4,007,317	-		Echvi_3393	0.25	-0.0
4,007,359	+		Echvi_3393	0.28	+0.5
4,007,359	+		Echvi_3393	0.28	-0.9
4,007,359	+		Echvi_3393	0.28	-0.4
4,007,363	+		Echvi_3393	0.28	-2.3
4,007,435	+		Echvi_3393	0.32	-0.2
4,007,435	+		Echvi_3393	0.32	+1.2
4,007,436	-		Echvi_3393	0.32	+1.2
4,007,543	+		Echvi_3393	0.39	-1.0
4,007,585	-		Echvi_3393	0.42	-1.6
4,007,661	+		Echvi_3393	0.46	+0.2
4,007,661	+		Echvi_3393	0.46	+0.6
4,007,694	+		Echvi_3393	0.48	-1.8
4,007,694	+		Echvi_3393	0.48	-0.6
4,007,694	+		Echvi_3393	0.48	-2.2
4,007,694	+		Echvi_3393	0.48	-0.4
4,007,695	-		Echvi_3393	0.49	+0.7
4,007,869	+		Echvi_3393	0.59	+0.1
4,007,870	-		Echvi_3393	0.59	+0.2
4,007,870	-		Echvi_3393	0.59	-1.2
4,007,870	-		Echvi_3393	0.59	+0.4
4,008,061	-		Echvi_3393	0.71	+0.3
4,008,066	+		Echvi_3393	0.72	-1.5
4,008,100	+		Echvi_3393	0.74	-2.2
4,008,100	+		Echvi_3393	0.74	-0.9
4,008,101	-		Echvi_3393	0.74	+0.1
4,008,102	+		Echvi_3393	0.74	-0.1
4,008,102	+		Echvi_3393	0.74	-3.0
4,008,103	-		Echvi_3393	0.74	-1.4
4,008,290	-		Echvi_3393	0.86	-0.1
4,008,298	+		Echvi_3393	0.86	-1.8
4,008,323	-		Echvi_3393	0.88	-0.7
4,008,447	+				-0.2
4,008,453	+				-0.8
4,008,480	-				+0.4
4,008,480	-				-0.5
4,008,480	-				-0.4
4,008,483	+				-1.3
4,008,484	-				+0.5
4,008,488	+				-1.4
4,008,546	+				-0.4
4,008,653	+				-0.5
4,008,687	+				-0.5
4,008,750	+		Echvi_3394	0.14	-1.0
4,008,751	-		Echvi_3394	0.14	+0.1
4,008,773	+		Echvi_3394	0.15	-0.2
4,008,774	-		Echvi_3394	0.15	+1.2
4,008,831	+		Echvi_3394	0.19	-1.3
4,008,836	+		Echvi_3394	0.19	+0.4
4,008,836	+		Echvi_3394	0.19	-1.5
4,008,852	+		Echvi_3394	0.20	-0.7
4,008,852	+		Echvi_3394	0.20	-0.5
4,008,853	-		Echvi_3394	0.20	+0.3
4,008,853	-		Echvi_3394	0.20	-1.1
4,008,857	+		Echvi_3394	0.21	+1.8
4,008,858	-		Echvi_3394	0.21	-1.1
4,008,858	-		Echvi_3394	0.21	-0.7
4,008,881	-		Echvi_3394	0.22	-1.0
4,008,906	+		Echvi_3394	0.24	+0.8
4,009,052	+		Echvi_3394	0.33	+0.2
4,009,073	+		Echvi_3394	0.34	-0.5
4,009,074	-		Echvi_3394	0.34	-0.7
4,009,297	+		Echvi_3394	0.48	-1.1
4,009,298	-		Echvi_3394	0.48	-0.4
4,009,298	-		Echvi_3394	0.48	-1.4
4,009,298	-		Echvi_3394	0.48	+1.1
4,009,300	-		Echvi_3394	0.48	-0.5
4,009,300	-		Echvi_3394	0.48	+0.5
4,009,375	-		Echvi_3394	0.53	-0.6
4,009,395	+		Echvi_3394	0.54	+0.0
4,009,396	-		Echvi_3394	0.54	-0.0
4,009,464	-		Echvi_3394	0.59	-1.0
4,009,471	-		Echvi_3394	0.59	-0.3
4,009,471	-		Echvi_3394	0.59	-0.2
4,009,471	-		Echvi_3394	0.59	+0.1
4,009,497	+		Echvi_3394	0.61	+0.9
4,009,498	-		Echvi_3394	0.61	-0.5