Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3391

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
4,001,220	+		Echvi_3390	0.57	-0.8
4,001,221	-		Echvi_3390	0.57	-0.1
4,001,226	-		Echvi_3390	0.58	+0.5
4,001,227	+		Echvi_3390	0.58	-0.7
4,001,334	+		Echvi_3390	0.62	+0.1
4,001,366	+		Echvi_3390	0.64	-0.5
4,001,367	-		Echvi_3390	0.64	+1.3
4,001,395	+		Echvi_3390	0.65	+1.2
4,001,395	+		Echvi_3390	0.65	-0.5
4,001,396	-		Echvi_3390	0.65	+0.3
4,001,474	-		Echvi_3390	0.69	+1.5
4,001,536	-		Echvi_3390	0.72	+2.2
4,001,536	-		Echvi_3390	0.72	-1.2
4,001,541	+		Echvi_3390	0.72	-0.2
4,001,573	+		Echvi_3390	0.73	-0.4
4,001,578	-		Echvi_3390	0.74	-1.9
4,001,579	+		Echvi_3390	0.74	+1.8
4,001,580	-		Echvi_3390	0.74	+0.1
4,001,640	+		Echvi_3390	0.76	-0.6
4,001,641	-		Echvi_3390	0.76	-1.5
4,001,681	+		Echvi_3390	0.78	+0.8
4,001,685	+		Echvi_3390	0.78	-0.1
4,001,685	+		Echvi_3390	0.78	-1.2
4,001,685	+		Echvi_3390	0.78	+1.2
4,001,691	-		Echvi_3390	0.79	+0.2
4,001,692	+		Echvi_3390	0.79	-1.1
4,001,692	+		Echvi_3390	0.79	-1.4
4,001,770	+		Echvi_3390	0.82	-0.6
4,001,771	-		Echvi_3390	0.82	-0.5
4,001,811	+		Echvi_3390	0.84	-1.8
4,001,811	+		Echvi_3390	0.84	-0.2
4,001,812	-		Echvi_3390	0.84	-1.1
4,001,812	-		Echvi_3390	0.84	+1.8
4,001,812	-		Echvi_3390	0.84	+0.1
4,001,812	-		Echvi_3390	0.84	-0.4
4,001,812	-		Echvi_3390	0.84	-1.5
4,001,867	+		Echvi_3390	0.87	+0.8
4,001,868	-		Echvi_3390	0.87	-1.1
4,001,933	+		Echvi_3390	0.90	-0.2
4,001,934	-		Echvi_3390	0.90	-0.4
4,001,934	-		Echvi_3390	0.90	-1.5
4,001,947	-				-0.5
4,002,046	+				-0.5
4,002,053	-				-0.9
4,002,106	-				-0.2
4,002,189	+				-0.0
4,002,189	+				-3.2
4,002,190	-				-1.4
4,002,190	-				-0.1
4,002,190	-				+0.2
4,002,191	+				-1.5
4,002,191	+				-2.2
4,002,197	+				+0.7
4,002,197	+				-0.6
4,002,197	+				+1.0
4,002,197	+				+0.2
4,002,278	-				-0.2
4,002,347	-				-1.0
4,002,347	-				-1.4
4,002,426	+				-1.0
4,002,426	+				+1.1
4,002,427	-				+1.3
4,002,427	-				-1.9
4,002,480	-				-0.4
4,002,480	-				+0.5
4,002,480	-				+0.4
4,002,480	-				-0.5
4,002,482	+				+2.1
4,002,482	+				-1.2
4,002,483	-				-0.8
4,002,524	-		Echvi_3391	0.11	-1.3
4,002,674	+		Echvi_3391	0.15	+1.4
4,002,782	+		Echvi_3391	0.19	+1.4
4,002,875	-		Echvi_3391	0.21	+0.1
4,002,875	-		Echvi_3391	0.21	-1.2
4,003,019	+		Echvi_3391	0.26	+1.3
4,003,048	-		Echvi_3391	0.27	+0.7
4,003,098	+		Echvi_3391	0.28	-0.8
4,003,116	+		Echvi_3391	0.29	-3.0
4,003,170	+		Echvi_3391	0.31	+0.6
4,003,170	+		Echvi_3391	0.31	-0.0
4,003,171	-		Echvi_3391	0.31	-0.7
4,003,182	+		Echvi_3391	0.31	-0.4
4,003,182	+		Echvi_3391	0.31	+0.0
4,003,183	-		Echvi_3391	0.31	+0.4
4,003,326	-		Echvi_3391	0.35	+0.8
4,003,379	+		Echvi_3391	0.37	-1.8
4,003,401	-		Echvi_3391	0.38	+0.4
4,003,491	-		Echvi_3391	0.40	-1.0
4,003,500	+		Echvi_3391	0.41	-0.3
4,003,500	+		Echvi_3391	0.41	+0.2
4,003,584	+		Echvi_3391	0.43	-2.8
4,003,587	+		Echvi_3391	0.43	-0.2
4,003,588	-		Echvi_3391	0.43	+0.3
4,003,651	+		Echvi_3391	0.45	-1.8
4,003,652	-		Echvi_3391	0.45	-0.8
4,003,674	-		Echvi_3391	0.46	+0.1
4,003,763	-		Echvi_3391	0.49	+3.2
4,003,780	-		Echvi_3391	0.49	+0.9
4,003,818	+		Echvi_3391	0.50	+0.6
4,003,819	-		Echvi_3391	0.50	-0.1
4,003,819	-		Echvi_3391	0.50	-0.4
4,003,845	+		Echvi_3391	0.51	-1.0
4,003,846	-		Echvi_3391	0.51	+0.6
4,003,846	-		Echvi_3391	0.51	-0.2
4,003,865	+		Echvi_3391	0.52	-0.1
4,004,049	+		Echvi_3391	0.58	-1.7
4,004,067	+		Echvi_3391	0.58	-2.8
4,004,068	-		Echvi_3391	0.58	+1.2
4,004,216	-		Echvi_3391	0.63	+0.6
4,004,265	+		Echvi_3391	0.64	+0.2
4,004,266	-		Echvi_3391	0.64	-1.0
4,004,298	+		Echvi_3391	0.65	-0.8
4,004,298	+		Echvi_3391	0.65	-0.6
4,004,299	-		Echvi_3391	0.65	-0.3
4,004,299	-		Echvi_3391	0.65	-0.6
4,004,301	-		Echvi_3391	0.65	+0.2
4,004,301	-		Echvi_3391	0.65	+0.1
4,004,412	+		Echvi_3391	0.69	-2.3
4,004,412	+		Echvi_3391	0.69	-1.0
4,004,430	+		Echvi_3391	0.69	-1.8
4,004,431	-		Echvi_3391	0.69	-0.0
4,004,431	-		Echvi_3391	0.69	+1.4
4,004,456	-		Echvi_3391	0.70	-0.4
4,004,509	-		Echvi_3391	0.72	+1.1
4,004,526	+		Echvi_3391	0.72	-1.4
4,004,527	-		Echvi_3391	0.72	-0.6
4,004,552	+		Echvi_3391	0.73	-0.6
4,004,556	+		Echvi_3391	0.73	+0.8
4,004,557	-		Echvi_3391	0.73	-0.5
4,004,557	-		Echvi_3391	0.73	-1.9
4,004,582	-		Echvi_3391	0.74	+0.1
4,004,626	+		Echvi_3391	0.75	-0.7
4,004,645	+		Echvi_3391	0.76	-1.0
4,004,645	+		Echvi_3391	0.76	+1.8
4,004,646	-		Echvi_3391	0.76	-0.8
4,004,650	+		Echvi_3391	0.76	+0.8
4,004,651	-		Echvi_3391	0.76	-0.7
4,004,683	-		Echvi_3391	0.77	+2.2
4,004,690	+		Echvi_3391	0.77	-0.0
4,004,690	+		Echvi_3391	0.77	-1.5
4,004,725	-		Echvi_3391	0.78	+0.6
4,004,725	-		Echvi_3391	0.78	-1.7
4,004,737	-		Echvi_3391	0.79	-0.2
4,004,769	+		Echvi_3391	0.80	-0.7
4,004,769	+		Echvi_3391	0.80	+0.7
4,004,769	+		Echvi_3391	0.80	-0.2
4,004,770	-		Echvi_3391	0.80	-0.0
4,004,770	-		Echvi_3391	0.80	-1.4
4,004,770	-		Echvi_3391	0.80	+0.5
4,004,770	-		Echvi_3391	0.80	-1.1
4,004,781	-		Echvi_3391	0.80	+0.2
4,004,799	+		Echvi_3391	0.81	+0.3
4,004,799	+		Echvi_3391	0.81	-1.2
4,004,799	+		Echvi_3391	0.81	-1.6
4,004,800	-		Echvi_3391	0.81	+1.6
4,004,800	-		Echvi_3391	0.81	+1.5
4,004,800	-		Echvi_3391	0.81	+0.3
4,004,823	+		Echvi_3391	0.81	-1.2
4,004,823	+		Echvi_3391	0.81	-1.1
4,004,869	-		Echvi_3391	0.83	+1.4
4,004,909	+		Echvi_3391	0.84	-0.2
4,004,910	-		Echvi_3391	0.84	-1.0
4,004,916	+		Echvi_3391	0.84	+0.2
4,004,917	-		Echvi_3391	0.84	-1.1
4,004,917	-		Echvi_3391	0.84	-0.1
4,005,057	+		Echvi_3391	0.89	-1.7
4,005,058	-		Echvi_3391	0.89	-0.8
4,005,058	-		Echvi_3391	0.89	+0.0
4,005,058	-		Echvi_3391	0.89	+0.4
4,005,140	+				-1.2
4,005,156	+				-3.0
4,005,219	-				+0.7
4,005,222	+				-1.5
4,005,222	+				-0.2
4,005,223	-				-0.3
4,005,355	-				+4.4
4,005,355	-				+0.1
4,005,355	-				-0.6
4,005,363	-				+1.1
4,005,363	-				+0.3
4,005,363	-				-2.0
4,005,413	-				-1.8
4,005,453	+				+1.2
4,005,454	-				+0.4
4,005,454	-				+0.7
4,005,454	-				+0.1
4,005,454	-				-1.4
4,005,454	-				+0.2
4,005,454	-				-0.2
4,005,455	+				-0.3
4,005,455	+				-0.3
4,005,455	+				+0.6
4,005,455	+				-0.6
4,005,455	+				-0.0
4,005,455	+				-1.7
4,005,455	+				-0.8
4,005,455	+				-2.0
4,005,455	+				-1.1
4,005,456	-				-1.9
4,005,456	-				-0.7
4,005,456	-				-1.5
4,005,456	-				+2.5
4,005,456	-				+0.6
4,005,456	-				+0.8
4,005,456	-				+0.8
4,005,456	-				-0.8
4,005,456	-				-0.3
4,005,456	-				+1.2
4,005,456	-				-0.6
4,005,456	-				-0.5
4,005,456	-				-0.3
4,005,456	-				-0.7
4,005,456	-				-1.1
4,005,456	-				-2.0
4,005,457	+				-1.3
4,005,457	+				-1.9
4,005,457	+				-0.0
4,005,457	+				+0.2
4,005,457	+				-1.0
4,005,457	+				+0.3
4,005,457	+				-0.8
4,005,458	-				-0.8
4,005,458	-				-0.9
4,005,458	-				-1.2
4,005,458	-				-0.4
4,005,458	-				+0.2
4,005,458	-				+0.3
4,005,458	-				+0.1
4,005,472	+				-0.9
4,005,558	-				+0.5
4,005,686	+		Echvi_3392	0.17	-2.4
4,005,786	+		Echvi_3392	0.23	-2.4
4,005,787	-		Echvi_3392	0.24	-0.2
4,005,799	+		Echvi_3392	0.24	-0.1
4,005,843	+		Echvi_3392	0.27	-0.8
4,005,844	-		Echvi_3392	0.27	+0.8
4,005,859	-		Echvi_3392	0.28	-0.0
4,005,865	+		Echvi_3392	0.29	-1.7
4,005,885	+		Echvi_3392	0.30	+0.2
4,005,931	-		Echvi_3392	0.33	+1.0
4,005,932	+		Echvi_3392	0.33	+0.2
4,005,932	+		Echvi_3392	0.33	-0.8
4,005,932	+		Echvi_3392	0.33	-0.3
4,005,932	+		Echvi_3392	0.33	-1.6
4,005,932	+		Echvi_3392	0.33	-0.5
4,005,933	-		Echvi_3392	0.33	+0.6
4,006,087	-		Echvi_3392	0.44	+1.8
4,006,108	-		Echvi_3392	0.45	-0.5
4,006,108	-		Echvi_3392	0.45	+1.8
4,006,111	+		Echvi_3392	0.46	-1.1
4,006,112	-		Echvi_3392	0.46	-1.4
4,006,112	-		Echvi_3392	0.46	-1.3
4,006,125	+		Echvi_3392	0.47	-1.2
4,006,126	-		Echvi_3392	0.47	-1.5
4,006,206	-		Echvi_3392	0.52	-0.7
4,006,238	+		Echvi_3392	0.54	-1.8
4,006,239	-		Echvi_3392	0.54	-0.3
4,006,314	-		Echvi_3392	0.59	+0.8
4,006,335	-		Echvi_3392	0.61	-0.7
4,006,343	+		Echvi_3392	0.61	-1.4
4,006,344	-		Echvi_3392	0.61	+0.7
4,006,399	-		Echvi_3392	0.65	+0.5
4,006,415	+		Echvi_3392	0.66	-3.1