Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3303

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
3,905,302	+				-0.8
3,905,370	+				-1.4
3,905,371	-				-0.1
3,905,371	-				+1.1
3,905,371	-				-0.4
3,905,373	-				-1.1
3,905,373	-				+0.9
3,905,480	-		Echvi_3301	0.21	+0.3
3,905,522	+		Echvi_3301	0.49	-1.3
3,905,522	+		Echvi_3301	0.49	-2.8
3,905,523	-		Echvi_3301	0.50	+0.8
3,905,564	-		Echvi_3301	0.77	+2.1
3,905,564	-		Echvi_3301	0.77	-0.3
3,905,600	+				-1.5
3,905,601	-				+1.3
3,905,614	+				-1.8
3,905,615	-				+0.2
3,905,648	-				+0.3
3,905,674	+				+0.1
3,905,675	-				-0.8
3,905,685	-				+0.2
3,905,741	+		Echvi_3302	0.16	+0.2
3,905,769	+		Echvi_3302	0.20	-0.5
3,905,770	-		Echvi_3302	0.21	-0.2
3,905,770	-		Echvi_3302	0.21	+0.6
3,905,849	+		Echvi_3302	0.33	-0.2
3,905,849	+		Echvi_3302	0.33	-0.6
3,905,850	-		Echvi_3302	0.33	+0.8
3,905,852	-		Echvi_3302	0.33	+1.4
3,905,943	+		Echvi_3302	0.47	-0.8
3,905,944	-		Echvi_3302	0.48	+0.3
3,905,945	+		Echvi_3302	0.48	-0.9
3,906,029	+		Echvi_3302	0.61	-2.5
3,906,030	-		Echvi_3302	0.61	+1.0
3,906,030	-		Echvi_3302	0.61	-1.5
3,906,094	+		Echvi_3302	0.71	+0.5
3,906,094	+		Echvi_3302	0.71	-1.0
3,906,095	-		Echvi_3302	0.71	+0.6
3,906,102	+		Echvi_3302	0.72	-0.8
3,906,102	+		Echvi_3302	0.72	-0.6
3,906,104	+		Echvi_3302	0.72	+0.1
3,906,104	+		Echvi_3302	0.72	+0.0
3,906,168	+		Echvi_3302	0.82	-0.0
3,906,168	+		Echvi_3302	0.82	-0.4
3,906,168	+		Echvi_3302	0.82	+0.8
3,906,169	-		Echvi_3302	0.82	-0.3
3,906,307	+				+0.3
3,906,310	-				-0.3
3,906,414	-		Echvi_3303	0.21	+0.3
3,906,414	-		Echvi_3303	0.21	+0.1
3,906,414	-		Echvi_3303	0.21	+0.4
3,906,456	+		Echvi_3303	0.27	-1.5
3,906,456	+		Echvi_3303	0.27	-0.3
3,906,457	-		Echvi_3303	0.27	+1.2
3,906,457	-		Echvi_3303	0.27	+0.5
3,906,562	-		Echvi_3303	0.43	+0.6
3,906,569	+		Echvi_3303	0.44	+1.0
3,906,569	+		Echvi_3303	0.44	+1.1
3,906,588	+		Echvi_3303	0.47	+1.1
3,906,588	+		Echvi_3303	0.47	+0.7
3,906,614	+		Echvi_3303	0.51	+1.2
3,906,615	-		Echvi_3303	0.51	+0.3
3,906,627	+		Echvi_3303	0.53	+1.0
3,906,627	+		Echvi_3303	0.53	-1.0
3,906,676	+		Echvi_3303	0.61	-0.4
3,906,678	+		Echvi_3303	0.61	-2.3
3,906,678	+		Echvi_3303	0.61	-2.6
3,906,679	-		Echvi_3303	0.61	+1.0
3,906,679	-		Echvi_3303	0.61	+0.1
3,906,679	-		Echvi_3303	0.61	+0.1
3,906,708	-		Echvi_3303	0.65	-1.3
3,906,837	-		Echvi_3303	0.85	+0.6
3,906,837	-		Echvi_3303	0.85	+0.5
3,906,837	-		Echvi_3303	0.85	+0.6
3,906,845	+		Echvi_3303	0.86	+0.4
3,906,845	+		Echvi_3303	0.86	+0.3
3,906,846	-		Echvi_3303	0.86	-0.2
3,906,898	+				+0.3
3,906,899	-				+0.0
3,906,935	-				+0.8
3,906,941	+				-1.1
3,906,943	+				+0.7
3,906,944	-				+0.2
3,906,977	+				+0.2
3,906,977	+				-0.7
3,906,977	+				-2.2
3,906,978	-				+0.8
3,906,989	+				+0.6
3,907,084	+				+0.1
3,907,084	+				-0.5
3,907,084	+				+0.9
3,907,085	-				-0.2
3,907,085	-				-1.6
3,907,091	-				+1.0
3,907,186	+		Echvi_3304	0.18	+0.7
3,907,324	+		Echvi_3304	0.34	-0.4
3,907,325	-		Echvi_3304	0.34	+1.3
3,907,415	+		Echvi_3304	0.45	-0.4
3,907,577	+		Echvi_3304	0.63	-1.6
3,907,578	-		Echvi_3304	0.64	-1.5
3,907,578	-		Echvi_3304	0.64	-0.3
3,907,602	-		Echvi_3304	0.66	+0.6
3,907,757	+		Echvi_3304	0.84	-2.4
3,907,845	+				-0.1
3,907,846	-				-0.2
3,907,846	-				+0.0
3,907,870	-				+0.2
3,907,906	-				-1.2
3,907,906	-				-0.1
3,907,909	-				-0.4
3,907,926	-				-1.8
3,907,926	-				-0.3