Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3268

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
3,871,744	+				+1.1
3,871,749	-				-0.0
3,871,753	+				+0.3
3,871,813	+		Echvi_3267	0.14	+0.1
3,871,828	+		Echvi_3267	0.16	+0.1
3,871,828	+		Echvi_3267	0.16	+0.5
3,871,828	+		Echvi_3267	0.16	-0.7
3,871,829	-		Echvi_3267	0.16	-0.8
3,871,835	-		Echvi_3267	0.17	-0.5
3,871,835	-		Echvi_3267	0.17	+1.7
3,871,917	-		Echvi_3267	0.29	-0.7
3,871,917	-		Echvi_3267	0.29	+0.7
3,871,945	-		Echvi_3267	0.33	+1.3
3,872,014	-		Echvi_3267	0.42	+2.8
3,872,014	-		Echvi_3267	0.42	-1.1
3,872,112	+		Echvi_3267	0.56	-0.4
3,872,112	+		Echvi_3267	0.56	+0.8
3,872,112	+		Echvi_3267	0.56	-0.1
3,872,123	+		Echvi_3267	0.58	-0.3
3,872,155	-		Echvi_3267	0.62	-1.3
3,872,172	+		Echvi_3267	0.64	+0.1
3,872,173	-		Echvi_3267	0.65	+1.0
3,872,176	-		Echvi_3267	0.65	+2.8
3,872,210	-		Echvi_3267	0.70	-1.0
3,872,299	-		Echvi_3267	0.82	+0.9
3,872,311	+		Echvi_3267	0.84	-1.3
3,872,316	-		Echvi_3267	0.85	+0.0
3,872,329	+		Echvi_3267	0.86	-1.2
3,872,333	-		Echvi_3267	0.87	+1.8
3,872,405	-				-1.5
3,872,405	-				+0.3
3,872,406	+				-1.5
3,872,459	+				+0.0
3,872,459	+				-0.5
3,872,460	-				-1.3
3,872,460	-				+0.1
3,872,460	-				+0.4
3,872,460	-				-0.7
3,872,460	-				+1.3
3,872,460	-				-0.7
3,872,533	+				+0.2
3,872,545	-				-0.8
3,872,547	+				-0.2
3,872,622	+				-0.1
3,872,622	+				+0.1
3,872,623	-				-0.6
3,872,625	-				+0.4
3,872,626	+				-0.6
3,872,627	-				-0.3
3,872,627	-				-0.3
3,872,627	-				+0.1
3,872,732	+		Echvi_3268	0.20	+0.6
3,872,737	-		Echvi_3268	0.21	+0.2
3,872,771	-		Echvi_3268	0.27	+0.9
3,872,772	+		Echvi_3268	0.27	+1.1
3,872,772	+		Echvi_3268	0.27	+1.4
3,872,773	-		Echvi_3268	0.27	-0.6
3,872,773	-		Echvi_3268	0.27	+1.5
3,872,773	-		Echvi_3268	0.27	-0.2
3,872,773	-		Echvi_3268	0.27	+0.4
3,872,775	-		Echvi_3268	0.27	+0.5
3,872,816	-		Echvi_3268	0.34	+0.3
3,872,816	-		Echvi_3268	0.34	+0.4
3,872,868	+		Echvi_3268	0.43	+0.3
3,872,872	+		Echvi_3268	0.44	+0.7
3,872,872	+		Echvi_3268	0.44	+0.4
3,872,873	-		Echvi_3268	0.44	+0.2
3,872,894	-		Echvi_3268	0.48	+0.3
3,872,995	+		Echvi_3268	0.65	+0.3
3,873,043	-		Echvi_3268	0.73	-0.2
3,873,048	+		Echvi_3268	0.74	-0.3
3,873,049	-		Echvi_3268	0.74	+0.1
3,873,065	+		Echvi_3268	0.77	+0.6
3,873,065	+		Echvi_3268	0.77	-0.2
3,873,065	+		Echvi_3268	0.77	+0.6
3,873,065	+		Echvi_3268	0.77	+0.3
3,873,066	-		Echvi_3268	0.77	-0.5
3,873,095	+		Echvi_3268	0.82	-0.3
3,873,096	-		Echvi_3268	0.82	+1.0
3,873,098	-		Echvi_3268	0.82	+0.4
3,873,098	-		Echvi_3268	0.82	-0.3
3,873,119	+		Echvi_3268	0.86	-1.2
3,873,120	-		Echvi_3268	0.86	-0.1
3,873,120	-		Echvi_3268	0.86	-1.0
3,873,150	+				+0.4
3,873,153	-				+0.6
3,873,153	-				+0.8
3,873,160	+				-2.4
3,873,160	+				+1.4
3,873,184	+				+0.5
3,873,239	-				+1.3
3,873,253	-				-1.0
3,873,265	-				-0.2
3,873,265	-				-1.0
3,873,269	-				-1.2
3,873,269	-				-0.5
3,873,269	-				-0.5
3,873,269	-				-1.0
3,873,269	-				+0.7
3,873,269	-				-1.3
3,873,278	-				-0.0
3,873,278	-				+0.8
3,873,278	-				-0.1
3,873,278	-				+0.5
3,873,278	-				+1.8
3,873,278	-				-0.0
3,873,278	-				-0.3
3,873,278	-				-0.0
3,873,278	-				-1.6
3,873,323	-				-0.5
3,873,331	+				-0.5
3,873,406	+				+0.1
3,873,406	+				+0.5
3,873,410	-				+0.2
3,873,426	-				-0.9
3,873,436	+		Echvi_3269	0.10	+0.7
3,873,437	-		Echvi_3269	0.11	+0.1
3,873,459	+		Echvi_3269	0.12	+0.7
3,873,459	+		Echvi_3269	0.12	+0.2
3,873,460	-		Echvi_3269	0.12	+1.8
3,873,460	-		Echvi_3269	0.12	-1.5
3,873,506	+		Echvi_3269	0.15	-0.5
3,873,507	-		Echvi_3269	0.15	+0.5
3,873,517	+		Echvi_3269	0.16	+0.0
3,873,518	-		Echvi_3269	0.16	+0.3
3,873,542	-		Echvi_3269	0.17	-2.2
3,873,542	-		Echvi_3269	0.17	+0.6
3,873,547	-		Echvi_3269	0.18	-0.5
3,873,560	+		Echvi_3269	0.18	+1.0
3,873,561	-		Echvi_3269	0.19	-1.7
3,873,561	-		Echvi_3269	0.19	-1.0
3,873,565	-		Echvi_3269	0.19	-2.0
3,873,573	+		Echvi_3269	0.19	+0.6
3,873,573	+		Echvi_3269	0.19	+0.1
3,873,573	+		Echvi_3269	0.19	-0.4
3,873,574	-		Echvi_3269	0.19	-0.8
3,873,581	-		Echvi_3269	0.20	+0.3
3,873,581	-		Echvi_3269	0.20	-1.1
3,873,604	+		Echvi_3269	0.21	+1.0
3,873,637	+		Echvi_3269	0.23	+0.1
3,873,638	-		Echvi_3269	0.23	+0.3
3,873,638	-		Echvi_3269	0.23	+0.8
3,873,653	-		Echvi_3269	0.24	+1.0
3,873,688	-		Echvi_3269	0.27	+1.1
3,873,703	-		Echvi_3269	0.28	+0.4
3,873,728	+		Echvi_3269	0.29	+0.4
3,873,728	+		Echvi_3269	0.29	-2.1
3,873,783	+		Echvi_3269	0.33	-0.9
3,873,783	+		Echvi_3269	0.33	+1.6
3,873,802	-		Echvi_3269	0.34	-1.0
3,873,826	+		Echvi_3269	0.36	+0.9
3,873,870	+		Echvi_3269	0.38	+0.1
3,873,871	-		Echvi_3269	0.38	-0.6
3,873,903	+		Echvi_3269	0.41	+1.3
3,873,925	+		Echvi_3269	0.42	-0.5
3,873,942	+		Echvi_3269	0.43	+0.3
3,873,991	+		Echvi_3269	0.46	+0.3
3,873,992	-		Echvi_3269	0.46	+0.8
3,873,999	+		Echvi_3269	0.47	-0.0
3,874,108	-		Echvi_3269	0.54	+0.6
3,874,200	-		Echvi_3269	0.60	-1.5