Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3180

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
3,783,254	+		Echvi_3178	0.23	+0.3
3,783,345	+		Echvi_3178	0.44	-0.3
3,783,359	-		Echvi_3178	0.48	-0.9
3,783,359	-				+1.9
3,783,359	-		Echvi_3178	0.48	+1.2
3,783,359	-		Echvi_3178	0.48	+0.5
3,783,361	+		Echvi_3178	0.48	+0.5
3,783,361	+		Echvi_3178	0.48	-0.9
3,783,361	+		Echvi_3178	0.48	+1.1
3,783,368	+		Echvi_3178	0.50	-1.8
3,783,402	+		Echvi_3178	0.58	+2.5
3,783,413	+		Echvi_3178	0.60	-1.3
3,783,466	-		Echvi_3178	0.72	+0.0
3,783,526	+		Echvi_3178	0.86	-0.2
3,783,527	-		Echvi_3178	0.87	+2.1
3,783,528	+		Echvi_3178	0.87	+0.7
3,783,528	+		Echvi_3178	0.87	+0.6
3,783,528	+		Echvi_3178	0.87	-0.1
3,783,529	-		Echvi_3178	0.87	+0.3
3,783,529	-		Echvi_3178	0.87	+2.5
3,783,542	-				-1.1
3,783,584	+				+0.3
3,783,584	+				-0.0
3,783,584	+				+0.0
3,783,585	-				-0.0
3,783,706	+		Echvi_3179	0.18	+0.1
3,783,706	+		Echvi_3179	0.18	+0.4
3,783,780	+		Echvi_3179	0.29	+1.4
3,783,780	+		Echvi_3179	0.29	+0.3
3,783,852	+		Echvi_3179	0.41	+0.2
3,783,855	+		Echvi_3179	0.42	-0.0
3,783,879	+		Echvi_3179	0.45	-1.8
3,783,882	+		Echvi_3179	0.46	-1.5
3,783,883	-		Echvi_3179	0.46	+0.7
3,783,886	+		Echvi_3179	0.46	+0.4
3,783,887	-		Echvi_3179	0.47	-0.9
3,783,887	-		Echvi_3179	0.47	+2.4
3,783,961	+		Echvi_3179	0.58	-1.9
3,784,018	+		Echvi_3179	0.68	+0.4
3,784,120	+		Echvi_3179	0.84	+1.9
3,784,120	+		Echvi_3179	0.84	+0.3
3,784,120	+		Echvi_3179	0.84	-0.1
3,784,120	+		Echvi_3179	0.84	+0.7
3,784,120	+		Echvi_3179	0.84	-0.8
3,784,121	-		Echvi_3179	0.84	+0.1
3,784,121	-		Echvi_3179	0.84	+0.5
3,784,121	-		Echvi_3179	0.84	+2.7
3,784,123	-		Echvi_3179	0.84	+0.6
3,784,154	+		Echvi_3179	0.89	+0.6
3,784,164	+				-0.0
3,784,165	-				+2.9
3,784,423	+		Echvi_3180	0.18	-0.9
3,784,423	+		Echvi_3180	0.18	-2.2
3,784,432	+		Echvi_3180	0.19	+1.5
3,784,434	+		Echvi_3180	0.19	-0.5
3,784,434	+		Echvi_3180	0.19	+1.9
3,784,434	+		Echvi_3180	0.19	-0.7
3,784,434	+		Echvi_3180	0.19	+0.2
3,784,434	+		Echvi_3180	0.19	-3.0
3,784,435	-		Echvi_3180	0.19	+0.4
3,784,435	-		Echvi_3180	0.19	+2.2
3,784,435	-		Echvi_3180	0.19	+0.5
3,784,556	+		Echvi_3180	0.31	-0.1
3,784,557	-		Echvi_3180	0.32	-0.9
3,784,561	-		Echvi_3180	0.32	+1.3
3,784,573	-		Echvi_3180	0.33	+2.9
3,784,635	-		Echvi_3180	0.39	+3.2
3,784,647	-		Echvi_3180	0.41	+0.9
3,784,672	+		Echvi_3180	0.43	-0.1
3,784,676	+		Echvi_3180	0.44	-0.5
3,784,676	+		Echvi_3180	0.44	+0.2
3,784,676	+		Echvi_3180	0.44	-0.9
3,784,676	+		Echvi_3180	0.44	+1.5
3,784,677	-		Echvi_3180	0.44	+0.4
3,784,677	-		Echvi_3180	0.44	+0.3
3,784,677	-		Echvi_3180	0.44	+1.5
3,784,762	-		Echvi_3180	0.52	+0.6
3,784,779	+		Echvi_3180	0.54	-0.3
3,784,779	+		Echvi_3180	0.54	-0.0
3,784,779	+		Echvi_3180	0.54	+0.0
3,784,779	+		Echvi_3180	0.54	-0.7
3,784,780	-		Echvi_3180	0.54	+0.5
3,784,780	-		Echvi_3180	0.54	+0.2
3,784,863	+		Echvi_3180	0.62	-1.5
3,784,960	+		Echvi_3180	0.72	-0.7
3,784,961	-		Echvi_3180	0.72	+0.3
3,784,967	-		Echvi_3180	0.73	+0.5
3,785,067	+		Echvi_3180	0.83	-0.3
3,785,067	+		Echvi_3180	0.83	+3.4
3,785,067	+		Echvi_3180	0.83	+1.1
3,785,068	-		Echvi_3180	0.83	-0.7
3,785,069	+		Echvi_3180	0.83	+0.7
3,785,069	+		Echvi_3180	0.83	+0.8
3,785,070	-		Echvi_3180	0.83	-1.5
3,785,070	-		Echvi_3180	0.83	+1.1
3,785,070	-		Echvi_3180	0.83	-1.6
3,785,071	+		Echvi_3180	0.83	+0.4
3,785,071	+		Echvi_3180	0.83	+1.3
3,785,072	-		Echvi_3180	0.83	+0.6
3,785,072	-		Echvi_3180	0.83	-0.4
3,785,072	-		Echvi_3180	0.83	+1.0
3,785,105	+		Echvi_3180	0.87	+0.3
3,785,106	-		Echvi_3180	0.87	-2.1
3,785,121	+		Echvi_3180	0.88	+0.1
3,785,121	+		Echvi_3180	0.88	-2.5
3,785,122	-		Echvi_3180	0.88	+0.6
3,785,126	+		Echvi_3180	0.89	-0.0
3,785,127	-		Echvi_3180	0.89	+1.1
3,785,156	+				-0.5
3,785,197	-				-0.5
3,785,197	-				-0.0
3,785,197	-				+0.9
3,785,199	-				-0.4
3,785,219	+				-1.5
3,785,220	-				+0.2
3,785,220	-				+0.3
3,785,224	+				+0.0
3,785,227	+				+0.6
3,785,242	-				+1.7
3,785,248	-				+0.2
3,785,268	+				+0.3
3,785,341	+		Echvi_3181	0.16	+0.5
3,785,341	+		Echvi_3181	0.16	+0.7
3,785,342	-		Echvi_3181	0.16	+1.9
3,785,343	+		Echvi_3181	0.16	+0.8
3,785,343	+		Echvi_3181	0.16	+0.0
3,785,343	+		Echvi_3181	0.16	+0.8
3,785,344	-		Echvi_3181	0.16	-0.3
3,785,344	-		Echvi_3181	0.16	+0.9
3,785,344	-		Echvi_3181	0.16	+1.4
3,785,399	-		Echvi_3181	0.25	-0.3
3,785,399	-		Echvi_3181	0.25	+0.0
3,785,442	-		Echvi_3181	0.32	-1.9
3,785,442	-		Echvi_3181	0.32	+1.1
3,785,507	+		Echvi_3181	0.42	+0.6
3,785,508	-		Echvi_3181	0.42	+0.0
3,785,517	-		Echvi_3181	0.44	-0.9
3,785,571	+		Echvi_3181	0.52	+0.1
3,785,571	+		Echvi_3181	0.52	+0.2
3,785,571	+		Echvi_3181	0.52	+1.1
3,785,571	+		Echvi_3181	0.52	+1.2
3,785,571	+		Echvi_3181	0.52	+0.2
3,785,571	+		Echvi_3181	0.52	-0.7
3,785,571	+		Echvi_3181	0.52	-0.6
3,785,571	+		Echvi_3181	0.52	-0.3
3,785,571	+		Echvi_3181	0.52	-0.6
3,785,571	+		Echvi_3181	0.52	-0.3
3,785,572	-		Echvi_3181	0.52	+0.9
3,785,572	-		Echvi_3181	0.52	+0.1
3,785,572	-		Echvi_3181	0.52	+1.9
3,785,638	+		Echvi_3181	0.63	-1.0
3,785,639	-		Echvi_3181	0.63	+1.1
3,785,661	+		Echvi_3181	0.67	-1.3
3,785,662	-		Echvi_3181	0.67	-0.1
3,785,682	+		Echvi_3181	0.70	+0.2
3,785,682	+		Echvi_3181	0.70	+0.4
3,785,719	+		Echvi_3181	0.76	+0.0
3,785,719	+		Echvi_3181	0.76	-0.4
3,785,720	-		Echvi_3181	0.76	+0.1
3,785,720	-		Echvi_3181	0.76	+0.9
3,785,720	-		Echvi_3181	0.76	+0.1
3,785,723	+		Echvi_3181	0.76	+0.6
3,785,741	+		Echvi_3181	0.79	+0.7
3,785,856	+				+0.1
3,785,857	-				+0.1
3,785,857	-				+0.6
3,785,857	-				-1.3
3,785,894	+				+1.1
3,785,895	-				+0.6
3,785,901	+				+1.5
3,785,941	+				-0.8
3,785,942	-				+0.1
3,786,017	-				+3.0
3,786,018	+				+0.6
3,786,018	+				-0.1
3,786,018	+				+0.5
3,786,019	-				+1.4
3,786,040	+				+0.3
3,786,054	+				+0.9
3,786,055	-				+0.6
3,786,097	+				+1.1
3,786,118	+				-2.9
3,786,201	+		Echvi_3182	0.12	-1.6
3,786,235	+		Echvi_3182	0.13	+0.3
3,786,235	+		Echvi_3182	0.13	+1.9