Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3171

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
3,776,642	-		Echvi_3170	0.54	-0.5
3,776,827	+		Echvi_3170	0.62	-0.0
3,776,840	-		Echvi_3170	0.63	+0.6
3,776,840	-		Echvi_3170	0.63	-0.9
3,776,848	+		Echvi_3170	0.63	+1.1
3,776,854	+		Echvi_3170	0.64	+0.1
3,776,854	+		Echvi_3170	0.64	-0.2
3,776,855	-		Echvi_3170	0.64	-0.5
3,776,855	-		Echvi_3170	0.64	+1.9
3,776,855	-		Echvi_3170	0.64	+0.8
3,776,855	-		Echvi_3170	0.64	+0.9
3,776,855	-		Echvi_3170	0.64	-0.0
3,776,855	-		Echvi_3170	0.64	-0.3
3,776,855	-		Echvi_3170	0.64	-0.1
3,776,914	-		Echvi_3170	0.67	+2.5
3,776,953	-		Echvi_3170	0.68	+0.8
3,776,987	+		Echvi_3170	0.70	-0.1
3,776,987	+		Echvi_3170	0.70	-0.9
3,776,987	+		Echvi_3170	0.70	-0.8
3,776,987	+		Echvi_3170	0.70	-0.4
3,776,987	+		Echvi_3170	0.70	-0.0
3,776,987	+		Echvi_3170	0.70	-0.2
3,776,988	-		Echvi_3170	0.70	+0.4
3,776,988	-		Echvi_3170	0.70	-0.3
3,776,990	-		Echvi_3170	0.70	-0.2
3,777,013	-		Echvi_3170	0.71	-0.1
3,777,019	-		Echvi_3170	0.72	+0.1
3,777,025	-		Echvi_3170	0.72	+0.2
3,777,025	-		Echvi_3170	0.72	+0.5
3,777,025	-		Echvi_3170	0.72	+0.4
3,777,025	-		Echvi_3170	0.72	+0.8
3,777,091	-		Echvi_3170	0.75	+2.2
3,777,188	+		Echvi_3170	0.80	-1.6
3,777,189	-		Echvi_3170	0.80	+2.5
3,777,201	+		Echvi_3170	0.80	+0.1
3,777,238	-		Echvi_3170	0.82	-0.1
3,777,238	-		Echvi_3170	0.82	+1.9
3,777,280	-		Echvi_3170	0.84	-1.7
3,777,280	-		Echvi_3170	0.84	+0.9
3,777,361	+		Echvi_3170	0.88	-0.5
3,777,362	-		Echvi_3170	0.88	+0.6
3,777,362	-		Echvi_3170	0.88	+0.3
3,777,403	-		Echvi_3170	0.90	-0.5
3,777,425	+				-0.1
3,777,426	-				+0.3
3,777,465	-				-0.4
3,777,466	+				+1.4
3,777,466	+				+0.2
3,777,466	+				-0.7
3,777,466	+				+0.9
3,777,467	-				+0.1
3,777,467	-				+0.2
3,777,467	-				+0.3
3,777,467	-				+0.6
3,777,472	-				+0.1
3,777,472	-				+0.3
3,777,486	+				+0.4
3,777,498	+				-0.3
3,777,499	-				+0.8
3,777,499	-				-0.3
3,777,502	-				-0.5
3,777,502	-				+2.4
3,777,502	-				-0.3
3,777,502	-				+1.1
3,777,504	-				-0.6
3,777,534	+				+0.2
3,777,535	-				-0.0
3,777,548	-				+0.9
3,777,555	+				+0.3
3,777,567	+				+0.3
3,777,568	-				+0.2
3,777,568	-				-0.3
3,777,568	-				+0.3
3,777,578	-				-0.3
3,777,578	-				-0.0
3,777,588	+				+0.3
3,777,589	-				+0.3
3,777,645	+				+2.5
3,777,645	+				-0.7
3,777,686	+				+0.5
3,777,691	+				+0.6
3,777,692	-				-0.4
3,777,716	+				+0.3
3,777,716	+				-0.1
3,777,717	-				+0.1
3,777,717	-				+2.4
3,777,801	+		Echvi_3171	0.15	+0.2
3,777,837	+		Echvi_3171	0.18	+0.4
3,777,848	+		Echvi_3171	0.19	-0.1
3,777,848	+		Echvi_3171	0.19	+0.0
3,777,848	+		Echvi_3171	0.19	+0.7
3,777,849	-		Echvi_3171	0.19	+0.5
3,777,849	-		Echvi_3171	0.19	+0.0
3,777,849	-		Echvi_3171	0.19	+0.3
3,777,850	-		Echvi_3171	0.19	+1.3
3,777,857	-		Echvi_3171	0.20	+1.0
3,777,865	+		Echvi_3171	0.20	+0.7
3,777,868	+		Echvi_3171	0.21	+1.4
3,777,868	+		Echvi_3171	0.21	-0.7
3,777,936	+		Echvi_3171	0.26	+1.1
3,777,936	+		Echvi_3171	0.26	-0.0
3,777,936	+		Echvi_3171	0.26	+1.2
3,777,936	+		Echvi_3171	0.26	+1.6
3,777,938	+		Echvi_3171	0.26	-1.6
3,777,939	-		Echvi_3171	0.26	-0.1
3,778,009	+		Echvi_3171	0.32	+0.7
3,778,012	+		Echvi_3171	0.32	-0.1
3,778,013	-		Echvi_3171	0.33	+0.5
3,778,027	+		Echvi_3171	0.34	-0.1
3,778,038	+		Echvi_3171	0.35	-2.4
3,778,056	+		Echvi_3171	0.36	-1.9
3,778,056	+		Echvi_3171	0.36	+0.3
3,778,056	+		Echvi_3171	0.36	-0.3
3,778,063	+		Echvi_3171	0.37	+0.6
3,778,064	-		Echvi_3171	0.37	+1.1
3,778,131	-		Echvi_3171	0.42	-1.1
3,778,146	+		Echvi_3171	0.43	+1.5
3,778,191	+		Echvi_3171	0.47	-0.6
3,778,206	+		Echvi_3171	0.48	+0.4
3,778,295	+		Echvi_3171	0.56	+0.8
3,778,459	-		Echvi_3171	0.69	+0.1
3,778,493	-		Echvi_3171	0.72	+0.3
3,778,582	-		Echvi_3171	0.79	+0.4
3,778,616	-		Echvi_3171	0.82	+0.4
3,778,621	+		Echvi_3171	0.82	+0.7
3,778,622	-		Echvi_3171	0.83	-0.9
3,778,622	-		Echvi_3171	0.83	+0.4
3,778,622	-		Echvi_3171	0.83	+1.9
3,778,661	-		Echvi_3171	0.86	-0.2
3,778,661	-		Echvi_3171	0.86	-0.3
3,778,661	-		Echvi_3171	0.86	-0.2
3,778,755	-				-0.4
3,778,789	-				-0.5
3,778,843	+				-1.1
3,778,966	-				-0.3
3,778,968	-				+0.1
3,778,968	-				+0.1
3,778,968	-				-0.5
3,778,972	+				-0.5
3,778,973	-				+1.5
3,778,973	-				-1.1
3,778,979	-				+0.1
3,779,020	-				-1.0
3,779,021	+				-0.1
3,779,022	-				-0.7
3,779,027	-				-1.5
3,779,035	-				-0.0
3,779,035	-				+0.1
3,779,035	-				-0.5
3,779,072	+				+1.2
3,779,076	+				+0.4
3,779,076	+				+0.1
3,779,077	-				+0.6
3,779,232	-		Echvi_3172	0.23	+0.4
3,779,240	-		Echvi_3172	0.26	+0.2
3,779,312	-		Echvi_3172	0.54	-2.5
3,779,352	+		Echvi_3172	0.69	+0.5
3,779,353	-		Echvi_3172	0.70	+0.4
3,779,388	-		Echvi_3172	0.83	+0.7
3,779,391	+		Echvi_3172	0.84	+0.1
3,779,421	+				+0.5
3,779,443	+				+0.1
3,779,477	+				-0.1
3,779,498	+				-0.8
3,779,532	+				+1.2
3,779,533	-				+0.3
3,779,533	-				-0.2
3,779,542	+				+1.5
3,779,542	+				-0.1
3,779,543	-				-0.5
3,779,543	-				+0.3
3,779,677	-		Echvi_3173	0.23	-1.3
3,779,679	+		Echvi_3173	0.23	+0.7
3,779,679	+		Echvi_3173	0.23	+0.0
3,779,680	-		Echvi_3173	0.23	+0.1
3,779,680	-		Echvi_3173	0.23	+0.1
3,779,682	-		Echvi_3173	0.24	-0.2
3,779,712	-		Echvi_3173	0.30	-0.6
3,779,742	+		Echvi_3173	0.37	-0.8
3,779,778	+		Echvi_3173	0.45	-0.1