Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3155

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
3,760,553	+		Echvi_3153	0.25	-0.3
3,760,553	+		Echvi_3153	0.25	-0.2
3,760,554	-		Echvi_3153	0.26	+0.4
3,760,554	-		Echvi_3153	0.26	+0.4
3,760,559	-		Echvi_3153	0.28	-1.0
3,760,559	-		Echvi_3153	0.28	+0.4
3,760,559	-		Echvi_3153	0.28	+0.6
3,760,559	-		Echvi_3153	0.28	+0.6
3,760,562	+		Echvi_3153	0.29	+0.1
3,760,562	+		Echvi_3153	0.29	-0.6
3,760,563	-		Echvi_3153	0.29	+0.8
3,760,563	-		Echvi_3153	0.29	-0.0
3,760,609	+		Echvi_3153	0.46	+0.4
3,760,609	+				+3.5
3,760,610	-		Echvi_3153	0.46	+0.4
3,760,621	+		Echvi_3153	0.50	-1.1
3,760,625	+		Echvi_3153	0.51	-2.1
3,760,638	-		Echvi_3153	0.56	-0.6
3,760,679	-		Echvi_3153	0.71	-1.0
3,760,681	+		Echvi_3153	0.71	-0.1
3,760,682	-		Echvi_3153	0.72	-0.1
3,760,682	-		Echvi_3153	0.72	-0.8
3,760,688	-		Echvi_3153	0.74	-1.1
3,760,688	-		Echvi_3153	0.74	-0.3
3,760,688	-		Echvi_3153	0.74	-2.0
3,760,696	+		Echvi_3153	0.77	+0.6
3,760,709	-		Echvi_3153	0.81	-2.6
3,760,709	-		Echvi_3153	0.81	+0.9
3,760,785	+				+0.6
3,760,798	+				+1.9
3,760,809	-				-0.3
3,760,836	+				-1.7
3,760,837	-				+0.3
3,760,856	+		Echvi_3154	0.11	-0.4
3,760,883	+		Echvi_3154	0.15	-2.3
3,760,883	+		Echvi_3154	0.15	+0.6
3,760,883	+		Echvi_3154	0.15	-0.2
3,760,884	-		Echvi_3154	0.15	-2.1
3,760,887	-		Echvi_3154	0.15	-0.3
3,760,887	-		Echvi_3154	0.15	-0.1
3,760,887	-		Echvi_3154	0.15	-0.1
3,760,887	-		Echvi_3154	0.15	+0.1
3,760,887	-		Echvi_3154	0.15	-0.4
3,760,889	+		Echvi_3154	0.15	-0.5
3,760,890	-		Echvi_3154	0.16	-0.4
3,760,921	+		Echvi_3154	0.20	-1.0
3,760,958	-		Echvi_3154	0.25	-1.6
3,760,993	+		Echvi_3154	0.30	+3.5
3,760,994	-		Echvi_3154	0.30	+1.3
3,760,994	-		Echvi_3154	0.30	-0.0
3,761,031	+		Echvi_3154	0.35	-0.7
3,761,031	+		Echvi_3154	0.35	-0.4
3,761,032	-		Echvi_3154	0.36	+0.1
3,761,038	+		Echvi_3154	0.36	-2.9
3,761,058	-		Echvi_3154	0.39	-0.3
3,761,058	-		Echvi_3154	0.39	-0.4
3,761,059	+		Echvi_3154	0.39	-3.2
3,761,059	+		Echvi_3154	0.39	+0.1
3,761,059	+		Echvi_3154	0.39	-0.1
3,761,060	-		Echvi_3154	0.40	+0.1
3,761,060	-		Echvi_3154	0.40	+1.1
3,761,060	-		Echvi_3154	0.40	+0.9
3,761,060	-		Echvi_3154	0.40	-0.7
3,761,060	-		Echvi_3154	0.40	+1.9
3,761,060	-		Echvi_3154	0.40	-1.4
3,761,060	-				+0.3
3,761,063	+		Echvi_3154	0.40	+2.5
3,761,064	-		Echvi_3154	0.40	-1.3
3,761,096	+		Echvi_3154	0.45	+0.9
3,761,105	+		Echvi_3154	0.46	-1.1
3,761,106	-		Echvi_3154	0.46	-0.1
3,761,109	+		Echvi_3154	0.46	-0.8
3,761,109	+		Echvi_3154	0.46	+1.0
3,761,113	+		Echvi_3154	0.47	-1.0
3,761,134	+		Echvi_3154	0.50	-1.3
3,761,148	-		Echvi_3154	0.52	+0.1
3,761,175	+		Echvi_3154	0.56	-1.8
3,761,175	+		Echvi_3154	0.56	-0.4
3,761,176	-		Echvi_3154	0.56	-0.2
3,761,176	-		Echvi_3154	0.56	+0.3
3,761,176	-		Echvi_3154	0.56	-0.9
3,761,176	-		Echvi_3154	0.56	-0.2
3,761,221	-		Echvi_3154	0.62	-0.6
3,761,270	+		Echvi_3154	0.69	+0.3
3,761,290	-		Echvi_3154	0.72	-1.1
3,761,322	+		Echvi_3154	0.76	-0.9
3,761,322	+		Echvi_3154	0.76	+1.9
3,761,323	-		Echvi_3154	0.77	-0.2
3,761,418	+		Echvi_3154	0.90	-1.3
3,761,419	-				+0.3
3,761,419	-				+0.3
3,761,419	-				-1.1
3,761,419	-				+1.1
3,761,431	+				-3.2
3,761,434	-				-0.1
3,761,446	-				+0.3
3,761,488	-				+0.3
3,761,488	-				-0.9
3,761,488	-				+0.3
3,761,502	-				+1.3
3,761,502	-				-0.8
3,761,522	-				-0.1
3,761,586	-		Echvi_3155	0.18	+0.1
3,761,601	-		Echvi_3155	0.21	+1.7
3,761,602	+		Echvi_3155	0.22	+0.9
3,761,645	+		Echvi_3155	0.31	-1.3
3,761,646	-		Echvi_3155	0.31	+0.1
3,761,648	+		Echvi_3155	0.32	-1.4
3,761,648	+		Echvi_3155	0.32	+1.9
3,761,649	-		Echvi_3155	0.32	-1.3
3,761,671	-		Echvi_3155	0.37	-0.1
3,761,684	+		Echvi_3155	0.39	-0.3
3,761,690	+		Echvi_3155	0.41	+0.0
3,761,690	+		Echvi_3155	0.41	-1.1
3,761,691	-		Echvi_3155	0.41	+1.5
3,761,691	-		Echvi_3155	0.41	+0.1
3,761,691	-		Echvi_3155	0.41	+0.7
3,761,762	+		Echvi_3155	0.56	-3.0
3,761,767	+		Echvi_3155	0.57	-0.1
3,761,783	+		Echvi_3155	0.61	-0.4
3,761,783	+		Echvi_3155	0.61	-1.6
3,761,784	-		Echvi_3155	0.61	+0.0
3,761,805	-		Echvi_3155	0.66	+0.7
3,761,805	-		Echvi_3155	0.66	-0.4
3,761,805	-		Echvi_3155	0.66	-0.9
3,761,845	+		Echvi_3155	0.74	-1.0
3,761,846	-		Echvi_3155	0.74	+1.3
3,761,849	-		Echvi_3155	0.75	+0.9
3,761,882	-		Echvi_3155	0.82	+1.9
3,761,885	-		Echvi_3155	0.83	-1.7
3,761,905	-		Echvi_3155	0.87	+0.2
3,761,949	-				+0.2
3,761,980	+				-1.1
3,761,980	+				+1.5
3,761,981	-				+0.5
3,761,986	+				-0.3
3,761,986	+				-1.4
3,761,987	-				-0.1
3,761,987	-				-1.6
3,761,987	-				+0.8
3,761,987	-				+0.1
3,761,987	-				+0.6
3,761,987	-				-0.3
3,761,987	-				+0.1
3,761,992	-				+0.5
3,762,043	-				-1.0
3,762,043	-				+0.4
3,762,140	-		Echvi_3156	0.13	-1.4
3,762,165	+		Echvi_3156	0.15	+1.1
3,762,168	-		Echvi_3156	0.15	+1.4
3,762,199	+		Echvi_3156	0.18	-0.2
3,762,200	-		Echvi_3156	0.18	+0.0
3,762,205	-		Echvi_3156	0.18	-0.8
3,762,205	-		Echvi_3156	0.18	-0.3
3,762,205	-		Echvi_3156	0.18	+0.1
3,762,205	-		Echvi_3156	0.18	+1.5
3,762,293	-		Echvi_3156	0.25	+0.6
3,762,295	+		Echvi_3156	0.25	-0.7
3,762,295	+		Echvi_3156	0.25	-1.6
3,762,296	-		Echvi_3156	0.25	-0.4
3,762,296	-		Echvi_3156	0.25	-0.1
3,762,296	-		Echvi_3156	0.25	-0.7
3,762,296	-		Echvi_3156	0.25	-0.3
3,762,297	+		Echvi_3156	0.25	-0.2
3,762,297	+		Echvi_3156	0.25	-2.2
3,762,298	-		Echvi_3156	0.25	-0.2
3,762,298	-		Echvi_3156	0.25	-0.4
3,762,298	-		Echvi_3156	0.25	+1.5
3,762,298	-		Echvi_3156	0.25	+1.9
3,762,308	-		Echvi_3156	0.26	+0.6
3,762,329	+		Echvi_3156	0.27	-1.8
3,762,329	+		Echvi_3156	0.27	-1.6
3,762,330	-		Echvi_3156	0.27	-1.3
3,762,330	-		Echvi_3156	0.27	+0.0
3,762,334	-		Echvi_3156	0.28	+1.3
3,762,437	-		Echvi_3156	0.35	+0.2
3,762,437	-		Echvi_3156	0.35	-0.1
3,762,437	-		Echvi_3156	0.35	-0.9
3,762,437	-		Echvi_3156	0.35	+0.8
3,762,437	-		Echvi_3156	0.35	-0.4
3,762,437	-		Echvi_3156	0.35	-0.6
3,762,467	-		Echvi_3156	0.37	-0.1
3,762,467	-		Echvi_3156	0.37	-0.6
3,762,467	-		Echvi_3156	0.37	+1.0
3,762,469	+		Echvi_3156	0.38	-2.4
3,762,469	+		Echvi_3156	0.38	-2.2
3,762,510	+		Echvi_3156	0.41	+1.9
3,762,514	-		Echvi_3156	0.41	+1.4
3,762,514	-		Echvi_3156	0.41	-0.9
3,762,516	+		Echvi_3156	0.41	+0.1
3,762,516	+		Echvi_3156	0.41	+0.9
3,762,517	-		Echvi_3156	0.41	+1.9
3,762,517	-		Echvi_3156	0.41	-0.2
3,762,517	-		Echvi_3156	0.41	-0.3
3,762,573	-		Echvi_3156	0.45	+0.3
3,762,573	-		Echvi_3156	0.45	+0.4
3,762,620	-		Echvi_3156	0.49	+1.3
3,762,628	-		Echvi_3156	0.49	+1.4
3,762,693	-		Echvi_3156	0.54	+0.7
3,762,712	-		Echvi_3156	0.55	+1.6
3,762,723	+		Echvi_3156	0.56	+0.3
3,762,724	-		Echvi_3156	0.56	+2.8
3,762,735	+		Echvi_3156	0.57	-1.0
3,762,735	+		Echvi_3156	0.57	-0.5
3,762,744	-		Echvi_3156	0.58	-0.1
3,762,768	+		Echvi_3156	0.60	-0.7
3,762,768	+		Echvi_3156	0.60	-2.6
3,762,769	-		Echvi_3156	0.60	+0.1
3,762,775	+		Echvi_3156	0.60	-2.4
3,762,856	-		Echvi_3156	0.66	+0.9
3,762,856	-		Echvi_3156	0.66	+0.7