Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3113

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
3,719,860	-				-1.8
3,719,860	-				+0.1
3,719,860	-				+1.1
3,719,913	+				+0.9
3,719,914	-				+0.4
3,719,976	-				+0.3
3,719,990	-				-0.0
3,720,110	+		Echvi_3112	0.24	-0.0
3,720,111	-		Echvi_3112	0.24	+0.9
3,720,187	-		Echvi_3112	0.33	-0.9
3,720,187	-		Echvi_3112	0.33	+1.2
3,720,449	+		Echvi_3112	0.66	+1.9
3,720,489	-		Echvi_3112	0.70	+2.1
3,720,583	-		Echvi_3112	0.82	+1.4
3,720,583	-		Echvi_3112	0.82	-0.4
3,720,676	-				+1.3
3,720,676	-				+1.9
3,720,676	-				+1.4
3,720,697	-				+0.0
3,720,697	-				-1.3
3,720,707	-				-1.3
3,720,707	-				-2.7
3,720,707	-				-1.1
3,720,707	-				-0.6
3,720,707	-				-1.7
3,720,707	-				+0.9
3,720,707	-				+0.9
3,720,707	-				+0.9
3,720,718	-				-0.5
3,720,728	-				+1.8
3,720,728	-				+0.5
3,720,728	-				-0.0
3,720,763	+				-0.2
3,720,763	+				+0.4
3,720,764	-				+0.9
3,720,764	-				+0.3
3,720,764	-				-0.6
3,720,764	-				-0.0
3,720,777	-				+0.9
3,720,796	+				+1.3
3,720,797	-				-0.8
3,720,807	+				+0.6
3,720,862	+		Echvi_3113	0.12	+2.3
3,720,863	-		Echvi_3113	0.12	-0.1
3,720,863	-		Echvi_3113	0.12	-0.1
3,720,934	-		Echvi_3113	0.19	-0.1
3,721,044	+		Echvi_3113	0.30	+1.0
3,721,045	-		Echvi_3113	0.30	-0.1
3,721,063	+		Echvi_3113	0.31	-2.0
3,721,064	-		Echvi_3113	0.31	+0.5
3,721,216	+		Echvi_3113	0.46	+1.0
3,721,226	+		Echvi_3113	0.47	+1.4
3,721,227	-		Echvi_3113	0.47	-0.1
3,721,227	-		Echvi_3113	0.47	+0.5
3,721,285	+		Echvi_3113	0.52	+0.9
3,721,286	-		Echvi_3113	0.52	+0.0
3,721,296	+		Echvi_3113	0.53	+0.1
3,721,297	-		Echvi_3113	0.53	+0.3
3,721,339	+		Echvi_3113	0.57	+1.9
3,721,412	-		Echvi_3113	0.64	+0.2
3,721,412	-		Echvi_3113	0.64	+1.9
3,721,429	-		Echvi_3113	0.66	-0.7
3,721,450	+		Echvi_3113	0.68	+1.4
3,721,453	-		Echvi_3113	0.68	+2.2
3,721,453	-		Echvi_3113	0.68	+0.3
3,721,453	-		Echvi_3113	0.68	-0.2
3,721,491	+		Echvi_3113	0.72	+1.7
3,721,492	-		Echvi_3113	0.72	+1.0
3,721,659	+		Echvi_3113	0.88	+2.9
3,721,660	-		Echvi_3113	0.88	+0.2
3,721,721	-				+0.7
3,721,785	+				+3.6
3,721,786	-				-0.3
3,721,788	-				-0.5
3,721,941	+				-0.3
3,721,941	+				+0.5
3,721,941	+				+0.5
3,721,941	+				+0.7
3,722,015	+				-1.3
3,722,016	-				+0.6
3,722,052	-				+0.3
3,722,052	-				-3.4
3,722,095	-				+0.3
3,722,140	+				+0.3
3,722,140	+				-1.8
3,722,140	+				-0.6
3,722,140	+				-1.0
3,722,140	+				+0.4
3,722,141	-				-0.5
3,722,141	-				-1.0
3,722,202	-		Echvi_3114	0.12	-1.8
3,722,236	+		Echvi_3114	0.14	-0.4
3,722,236	+		Echvi_3114	0.14	-0.5
3,722,237	-		Echvi_3114	0.14	-0.4
3,722,280	-		Echvi_3114	0.16	+0.5
3,722,351	+		Echvi_3114	0.19	-2.0
3,722,351	+		Echvi_3114	0.19	-0.5
3,722,426	-		Echvi_3114	0.22	+1.9
3,722,502	-		Echvi_3114	0.25	-0.6
3,722,580	+		Echvi_3114	0.29	-0.8
3,722,584	-		Echvi_3114	0.29	-0.0
3,722,590	-		Echvi_3114	0.29	+0.7
3,722,635	+		Echvi_3114	0.31	+0.3
3,722,661	-		Echvi_3114	0.32	+1.9
3,722,683	-		Echvi_3114	0.33	+1.3
3,722,707	+		Echvi_3114	0.34	+0.4
3,722,708	-		Echvi_3114	0.34	-0.5
3,722,708	-		Echvi_3114	0.34	+2.7
3,722,711	-		Echvi_3114	0.34	+1.1
3,722,711	-		Echvi_3114	0.34	-0.7
3,722,756	+		Echvi_3114	0.36	-0.0
3,722,756	+		Echvi_3114	0.36	-1.0
3,722,756	+		Echvi_3114	0.36	+0.9
3,722,757	-		Echvi_3114	0.36	-0.4