Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3099

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
3,701,971	+		Echvi_3098	0.19	+2.1
3,702,010	-		Echvi_3098	0.23	-1.6
3,702,010	-		Echvi_3098	0.23	+0.8
3,702,010	-		Echvi_3098	0.23	+0.0
3,702,016	+		Echvi_3098	0.23	-0.9
3,702,017	-		Echvi_3098	0.23	+0.1
3,702,125	-		Echvi_3098	0.34	-0.2
3,702,209	-		Echvi_3098	0.42	-0.2
3,702,243	+		Echvi_3098	0.45	+0.9
3,702,244	-		Echvi_3098	0.45	-0.6
3,702,244	-		Echvi_3098	0.45	-0.5
3,702,260	+		Echvi_3098	0.46	+2.1
3,702,261	-		Echvi_3098	0.46	+1.2
3,702,287	+		Echvi_3098	0.49	-0.5
3,702,288	-		Echvi_3098	0.49	-0.7
3,702,288	-		Echvi_3098	0.49	+0.8
3,702,318	+		Echvi_3098	0.52	+1.0
3,702,318	+		Echvi_3098	0.52	+2.1
3,702,319	-		Echvi_3098	0.52	-0.1
3,702,382	+		Echvi_3098	0.58	-0.3
3,702,386	-		Echvi_3098	0.58	+0.8
3,702,397	+		Echvi_3098	0.59	-0.4
3,702,398	-		Echvi_3098	0.59	+0.5
3,702,432	-		Echvi_3098	0.63	+0.8
3,702,432	-		Echvi_3098	0.63	-1.6
3,702,496	+		Echvi_3098	0.69	-0.2
3,702,496	+		Echvi_3098	0.69	-1.0
3,702,549	-		Echvi_3098	0.74	+2.8
3,702,562	+		Echvi_3098	0.75	-0.7
3,702,563	-		Echvi_3098	0.75	+2.2
3,702,601	+		Echvi_3098	0.78	+0.6
3,702,688	+		Echvi_3098	0.87	+1.8
3,702,689	-		Echvi_3098	0.87	-1.5
3,702,689	-		Echvi_3098	0.87	-0.7
3,702,689	-		Echvi_3098	0.87	+0.7
3,702,791	+				-1.2
3,702,792	-				-0.1
3,702,828	-				-0.7
3,702,845	+				-0.2
3,702,845	+				-1.9
3,702,851	+				+0.7
3,702,863	+				-0.2
3,702,870	-				+0.3
3,702,870	-				+1.2
3,702,933	-				-1.0
3,702,940	+				-0.3
3,702,972	+				-0.2
3,702,972	+				+0.8
3,702,972	+				-0.3
3,702,973	-				+1.6
3,702,991	-		Echvi_3099	0.14	-1.7
3,703,007	-		Echvi_3099	0.20	-0.2
3,703,007	-		Echvi_3099	0.20	+0.3
3,703,033	-		Echvi_3099	0.30	+0.3
3,703,071	+		Echvi_3099	0.44	-0.1
3,703,071	+		Echvi_3099	0.44	-1.6
3,703,071	+		Echvi_3099	0.44	-2.5
3,703,071	+		Echvi_3099	0.44	-1.0
3,703,072	-		Echvi_3099	0.44	-1.6
3,703,073	+		Echvi_3099	0.44	+1.4
3,703,073	+		Echvi_3099	0.44	-0.5
3,703,073	+		Echvi_3099	0.44	-0.6
3,703,073	+		Echvi_3099	0.44	+0.8
3,703,073	+		Echvi_3099	0.44	-1.5
3,703,073	+		Echvi_3099	0.44	-0.5
3,703,073	+		Echvi_3099	0.44	-0.3
3,703,074	-		Echvi_3099	0.45	-0.2
3,703,074	-		Echvi_3099	0.45	+0.8
3,703,074	-		Echvi_3099	0.45	+0.2
3,703,074	-		Echvi_3099	0.45	+0.2
3,703,080	+		Echvi_3099	0.47	+0.0
3,703,080	+		Echvi_3099	0.47	-0.5
3,703,184	+		Echvi_3099	0.86	-1.0
3,703,211	+				+1.7
3,703,212	-				+0.3
3,703,225	+				-1.5
3,703,225	+				-0.7
3,703,225	+				-1.8
3,703,226	-				+0.7
3,703,226	-				-0.9
3,703,226	-				-0.2
3,703,237	+				-0.9
3,703,238	-				-0.6
3,703,247	+				-2.5
3,703,264	-				+0.6
3,703,277	+				-0.6
3,703,277	+				-1.1
3,703,278	-				-0.0
3,703,298	-				-0.1
3,703,333	+				-0.7
3,703,334	-				+0.1
3,703,356	-				-1.0
3,703,356	-				+0.6
3,703,367	+				+0.1
3,703,367	+				+0.2
3,703,379	-				+0.4
3,703,387	+				+0.1
3,703,397	+				-0.8
3,703,668	+		Echvi_3100	0.17	+0.1
3,703,735	+		Echvi_3100	0.23	-0.6
3,703,735	+		Echvi_3100	0.23	+0.7
3,703,736	-		Echvi_3100	0.23	-1.3
3,703,744	-		Echvi_3100	0.24	+1.8
3,703,870	+		Echvi_3100	0.35	-0.4
3,703,968	+		Echvi_3100	0.43	+0.3
3,703,969	-		Echvi_3100	0.43	-2.9
3,703,969	-		Echvi_3100	0.43	-1.7
3,704,033	+		Echvi_3100	0.49	-1.3
3,704,033	+		Echvi_3100	0.49	+1.8
3,704,103	+		Echvi_3100	0.55	-0.2
3,704,103	+		Echvi_3100	0.55	-1.2
3,704,104	-		Echvi_3100	0.55	-0.9
3,704,106	+		Echvi_3100	0.55	-0.6
3,704,106	+		Echvi_3100	0.55	-1.0
3,704,107	-		Echvi_3100	0.55	+0.0