Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3087

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
3,687,192	-		Echvi_3086	0.36	-0.6
3,687,214	-		Echvi_3086	0.37	+0.7
3,687,263	+		Echvi_3086	0.41	-0.9
3,687,264	-		Echvi_3086	0.41	+1.1
3,687,339	-		Echvi_3086	0.46	+0.4
3,687,344	-		Echvi_3086	0.46	+0.2
3,687,359	+		Echvi_3086	0.47	+0.5
3,687,432	-		Echvi_3086	0.52	+0.5
3,687,441	+		Echvi_3086	0.53	+0.3
3,687,442	-		Echvi_3086	0.53	-0.6
3,687,505	-		Echvi_3086	0.57	+0.6
3,687,505	-		Echvi_3086	0.57	-0.2
3,687,507	+		Echvi_3086	0.57	-1.2
3,687,594	+		Echvi_3086	0.63	-2.6
3,687,595	-		Echvi_3086	0.63	-1.1
3,687,595	-		Echvi_3086	0.63	+0.9
3,687,615	+		Echvi_3086	0.64	-1.0
3,687,615	+		Echvi_3086	0.64	-0.3
3,687,615	+		Echvi_3086	0.64	-2.6
3,687,616	-		Echvi_3086	0.65	+1.8
3,687,634	+		Echvi_3086	0.66	-1.7
3,687,642	-		Echvi_3086	0.66	-0.2
3,687,672	+		Echvi_3086	0.68	+0.0
3,687,673	-		Echvi_3086	0.68	-0.3
3,687,673	-		Echvi_3086	0.68	+1.1
3,687,702	+		Echvi_3086	0.70	+0.1
3,687,703	-		Echvi_3086	0.70	+0.4
3,687,703	-		Echvi_3086	0.70	+1.2
3,687,802	-		Echvi_3086	0.77	-1.2
3,687,812	-		Echvi_3086	0.78	-0.6
3,688,086	+				-0.8
3,688,087	-				-0.1
3,688,088	+				-0.9
3,688,088	+				-0.0
3,688,088	+				+0.8
3,688,089	-				-0.1
3,688,089	-				-1.7
3,688,089	-				+0.3
3,688,089	-				+2.2
3,688,089	-				+0.3
3,688,089	-				-0.5
3,688,089	-				+0.0
3,688,089	-				-0.8
3,688,093	-				-0.3
3,688,103	-				+0.3
3,688,112	+				-2.8
3,688,112	+				+1.2
3,688,113	-				-2.0
3,688,113	-				+0.1
3,688,209	-				-0.7
3,688,209	-				-0.8
3,688,209	-				+2.8
3,688,209	-				+0.4
3,688,218	+				-1.1
3,688,219	-				+0.3
3,688,219	-				+0.5
3,688,220	+				-0.7
3,688,220	+				+0.3
3,688,220	+				-1.3
3,688,220	+				-1.2
3,688,221	-				-2.2
3,688,221	-				-0.4
3,688,221	-				-0.5
3,688,221	-				+0.2
3,688,278	+		Echvi_3087	0.12	-1.1
3,688,279	-		Echvi_3087	0.12	+0.1
3,688,279	-		Echvi_3087	0.12	-2.2
3,688,279	-		Echvi_3087	0.12	-0.5
3,688,296	-		Echvi_3087	0.13	-0.7
3,688,296	-		Echvi_3087	0.13	+0.0
3,688,341	-		Echvi_3087	0.18	-0.7
3,688,375	+		Echvi_3087	0.21	-0.3
3,688,375	+		Echvi_3087	0.21	-0.3
3,688,399	+		Echvi_3087	0.23	-1.0
3,688,399	+		Echvi_3087	0.23	-1.6
3,688,548	+		Echvi_3087	0.37	-0.8
3,688,549	-		Echvi_3087	0.37	-0.6
3,688,549	-		Echvi_3087	0.37	+0.3
3,688,552	+		Echvi_3087	0.37	-1.1
3,688,553	-		Echvi_3087	0.37	-0.4
3,688,553	-				+2.8
3,688,553	-		Echvi_3087	0.37	-0.7
3,688,553	-		Echvi_3087	0.37	+1.5
3,688,553	-		Echvi_3087	0.37	-0.3
3,688,663	+		Echvi_3087	0.47	-0.7
3,688,664	-		Echvi_3087	0.48	+0.4
3,688,808	-		Echvi_3087	0.61	-1.5
3,688,846	+		Echvi_3087	0.65	-1.6
3,688,847	-		Echvi_3087	0.65	-0.6
3,688,865	+		Echvi_3087	0.66	-1.0
3,688,865	+		Echvi_3087	0.66	-0.6
3,688,866	-		Echvi_3087	0.66	+0.3
3,688,879	-		Echvi_3087	0.68	+0.3
3,688,933	+		Echvi_3087	0.73	-2.5
3,688,933	+		Echvi_3087	0.73	-0.8
3,688,934	-		Echvi_3087	0.73	-1.9
3,688,948	+		Echvi_3087	0.74	-2.0
3,688,951	-		Echvi_3087	0.74	-2.0
3,689,037	-		Echvi_3087	0.82	-1.5
3,689,041	+		Echvi_3087	0.83	-1.9
3,689,041	+		Echvi_3087	0.83	-1.4
3,689,067	+		Echvi_3087	0.85	+1.1
3,689,068	-		Echvi_3087	0.85	-0.1
3,689,068	-		Echvi_3087	0.85	+0.1
3,689,068	-		Echvi_3087	0.85	+0.4
3,689,068	-		Echvi_3087	0.85	-0.6
3,689,070	+		Echvi_3087	0.85	-1.2
3,689,071	-		Echvi_3087	0.85	+1.0
3,689,152	+				+1.8
3,689,153	-				-0.8
3,689,163	+				+0.1
3,689,217	-				+0.4
3,689,220	+				-0.6
3,689,221	-				+0.3
3,689,228	+				+0.6
3,689,228	+				-0.6
3,689,228	+				-0.2
3,689,265	-				-0.2
3,689,293	+		Echvi_3088	0.15	-0.5
3,689,344	+		Echvi_3088	0.28	+0.3
3,689,345	-		Echvi_3088	0.28	+0.6
3,689,345	-		Echvi_3088	0.28	+0.3
3,689,345	-		Echvi_3088	0.28	-0.0
3,689,373	+		Echvi_3088	0.35	-1.3
3,689,374	-		Echvi_3088	0.35	+1.2
3,689,374	-		Echvi_3088	0.35	-1.0
3,689,374	-		Echvi_3088	0.35	+0.8
3,689,392	+		Echvi_3088	0.40	+0.9
3,689,394	+		Echvi_3088	0.41	+0.0
3,689,394	+		Echvi_3088	0.41	+0.6
3,689,395	-		Echvi_3088	0.41	-0.0
3,689,427	+		Echvi_3088	0.49	-0.2
3,689,463	-		Echvi_3088	0.58	+2.5
3,689,496	-		Echvi_3088	0.67	-0.2
3,689,639	-				-0.7
3,689,639	-				-2.1
3,689,642	-				-1.7
3,689,642	-				-0.1
3,689,646	+				-0.1
3,689,647	-				-1.3
3,689,647	-				-0.3
3,689,649	-				-0.9
3,689,743	+				+0.4
3,689,860	-				-0.5
3,689,862	+				-0.4
3,689,862	+				+0.1
3,689,863	-				-0.7
3,689,863	-				+0.7
3,689,863	-				-0.9
3,689,869	+				+0.3
3,689,947	+		Echvi_3089	0.15	+2.3
3,689,998	+		Echvi_3089	0.19	+0.9
3,689,998	+		Echvi_3089	0.19	-0.2
3,690,041	+		Echvi_3089	0.22	-0.2
3,690,114	-		Echvi_3089	0.27	+3.8
3,690,128	+		Echvi_3089	0.28	-0.6
3,690,162	-		Echvi_3089	0.30	-0.2
3,690,174	+		Echvi_3089	0.31	-0.4
3,690,174	+		Echvi_3089	0.31	+1.4
3,690,174	+		Echvi_3089	0.31	-0.6
3,690,174	+		Echvi_3089	0.31	+0.3
3,690,175	-		Echvi_3089	0.31	+0.3
3,690,175	-		Echvi_3089	0.31	-1.5
3,690,175	-		Echvi_3089	0.31	+1.0
3,690,176	+		Echvi_3089	0.31	-2.1
3,690,220	-		Echvi_3089	0.34	-0.7