Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2874

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
3,444,347	+		Echvi_2873	0.42	-0.8
3,444,423	-		Echvi_2873	0.47	-3.5
3,444,431	+		Echvi_2873	0.48	-1.0
3,444,434	+		Echvi_2873	0.48	-0.3
3,444,434	+		Echvi_2873	0.48	-0.7
3,444,435	-		Echvi_2873	0.48	+0.1
3,444,514	-		Echvi_2873	0.53	+0.7
3,444,529	-		Echvi_2873	0.54	+0.3
3,444,529	-		Echvi_2873	0.54	-1.5
3,444,646	+		Echvi_2873	0.62	-0.1
3,444,647	-		Echvi_2873	0.62	-0.9
3,444,647	-		Echvi_2873	0.62	-0.7
3,444,647	-		Echvi_2873	0.62	+1.9
3,444,770	+		Echvi_2873	0.71	-3.0
3,444,770	+		Echvi_2873	0.71	+1.5
3,444,771	-				+0.3
3,444,817	+		Echvi_2873	0.74	+0.8
3,444,824	+		Echvi_2873	0.75	-0.6
3,444,824	+		Echvi_2873	0.75	-0.7
3,444,824	+		Echvi_2873	0.75	-1.5
3,444,825	-		Echvi_2873	0.75	-1.4
3,444,825	-		Echvi_2873	0.75	-0.5
3,444,825	-		Echvi_2873	0.75	+0.1
3,444,826	+		Echvi_2873	0.75	+0.9
3,444,826	+		Echvi_2873	0.75	+1.4
3,444,826	+		Echvi_2873	0.75	+0.9
3,444,826	+		Echvi_2873	0.75	+1.2
3,444,827	-		Echvi_2873	0.75	-1.8
3,444,827	-		Echvi_2873	0.75	-0.1
3,444,827	-		Echvi_2873	0.75	-0.0
3,444,827	-		Echvi_2873	0.75	-0.5
3,444,827	-		Echvi_2873	0.75	-1.5
3,444,827	-		Echvi_2873	0.75	+0.3
3,444,827	-		Echvi_2873	0.75	+1.9
3,444,848	-		Echvi_2873	0.76	+0.5
3,444,863	+		Echvi_2873	0.77	-1.3
3,444,864	-		Echvi_2873	0.77	-0.1
3,444,926	-		Echvi_2873	0.82	+1.3
3,444,954	+		Echvi_2873	0.84	-1.9
3,444,955	-		Echvi_2873	0.84	-0.5
3,445,047	+				+0.5
3,445,094	+				-0.5
3,445,095	-				+0.9
3,445,123	+				-0.9
3,445,124	-				+0.7
3,445,124	-				+2.0
3,445,132	+				+0.4
3,445,132	+				+0.1
3,445,133	-				+2.9
3,445,133	-				+1.0
3,445,133	-				-0.5
3,445,224	-				+0.9
3,445,248	+				-0.1
3,445,274	+				+0.3
3,445,275	-				+0.3
3,445,294	-				-1.8
3,445,295	+				-0.5
3,445,295	+				-0.9
3,445,296	-				-0.8
3,445,345	-				+0.9
3,445,364	+				-0.8
3,445,384	-		Echvi_2874	0.12	-1.4
3,445,388	-		Echvi_2874	0.12	+0.9
3,445,472	+		Echvi_2874	0.21	-0.4
3,445,546	+		Echvi_2874	0.29	-0.6
3,445,546	+		Echvi_2874	0.29	+0.4
3,445,546	+		Echvi_2874	0.29	-0.5
3,445,626	+		Echvi_2874	0.38	-2.5
3,445,627	-		Echvi_2874	0.38	-2.3
3,445,627	-		Echvi_2874	0.38	-0.5
3,445,841	+		Echvi_2874	0.61	+0.3
3,445,884	-		Echvi_2874	0.66	+0.9
3,445,922	+		Echvi_2874	0.70	-0.9
3,445,922	+		Echvi_2874	0.70	-0.5
3,445,923	-		Echvi_2874	0.70	-1.2
3,445,946	+		Echvi_2874	0.72	-0.5
3,445,946	+		Echvi_2874	0.72	-0.8
3,445,947	-		Echvi_2874	0.72	-0.1
3,445,972	+		Echvi_2874	0.75	-1.5
3,445,972	+		Echvi_2874	0.75	-0.3
3,445,972	+		Echvi_2874	0.75	-0.6
3,445,997	+		Echvi_2874	0.78	+0.4
3,445,997	+		Echvi_2874	0.78	+0.3
3,445,998	-		Echvi_2874	0.78	+0.9
3,446,205	+				+0.1
3,446,205	+				+0.1
3,446,228	+				+0.0
3,446,228	+				-0.1
3,446,290	+				+0.0
3,446,291	-				+0.3
3,446,291	-				+0.7
3,446,291	-				+0.9
3,446,316	+				-0.1
3,446,316	+				-2.7
3,446,355	-				-1.3
3,446,365	-				+0.1
3,446,368	-				-2.1
3,446,380	+				-0.1
3,446,381	-				+0.3
3,446,381	-				-0.2
3,446,384	+				+1.0
3,446,385	-				-0.1
3,446,385	-				-0.7
3,446,414	-		Echvi_2875	0.12	+1.9
3,446,414	-		Echvi_2875	0.12	+0.2
3,446,430	-		Echvi_2875	0.14	-1.1
3,446,440	+		Echvi_2875	0.16	-0.2
3,446,441	-		Echvi_2875	0.16	-0.1
3,446,484	-		Echvi_2875	0.22	+0.9
3,446,486	+		Echvi_2875	0.22	-0.2
3,446,487	-		Echvi_2875	0.22	-0.3
3,446,518	+		Echvi_2875	0.26	+0.9
3,446,519	-		Echvi_2875	0.26	+0.7
3,446,524	+		Echvi_2875	0.27	-0.5
3,446,524	+		Echvi_2875	0.27	+2.1
3,446,524	+		Echvi_2875	0.27	+0.6
3,446,525	-		Echvi_2875	0.27	+0.4
3,446,525	-		Echvi_2875	0.27	-0.7
3,446,525	-		Echvi_2875	0.27	-0.3
3,446,525	-		Echvi_2875	0.27	+1.7
3,446,527	-		Echvi_2875	0.27	+0.3
3,446,527	-		Echvi_2875	0.27	+0.0
3,446,565	-		Echvi_2875	0.33	-0.7
3,446,565	-		Echvi_2875	0.33	-1.5
3,446,565	-		Echvi_2875	0.33	+1.9
3,446,577	+		Echvi_2875	0.34	-2.0
3,446,577	+		Echvi_2875	0.34	+0.3
3,446,616	-		Echvi_2875	0.39	+0.6
3,446,626	-		Echvi_2875	0.41	+1.4
3,446,667	+		Echvi_2875	0.46	-0.1
3,446,667	+		Echvi_2875	0.46	-0.1
3,446,712	+		Echvi_2875	0.52	-0.8
3,446,728	-		Echvi_2875	0.54	+0.3
3,446,734	-		Echvi_2875	0.55	-0.7
3,446,750	+		Echvi_2875	0.57	+0.3
3,446,782	-		Echvi_2875	0.62	+2.3
3,446,794	-		Echvi_2875	0.63	+1.5
3,446,839	-		Echvi_2875	0.69	-0.6
3,446,894	-		Echvi_2875	0.77	+0.0
3,446,894	-		Echvi_2875	0.77	-0.8
3,446,907	-		Echvi_2875	0.78	-2.8
3,446,907	-		Echvi_2875	0.78	-0.1
3,446,907	-		Echvi_2875	0.78	-0.2
3,446,907	-		Echvi_2875	0.78	+1.1
3,446,954	-		Echvi_2875	0.85	-2.1
3,446,994	+				+0.9
3,447,037	-				-1.5
3,447,047	-				+0.4
3,447,086	-				+0.6
3,447,086	-				+0.2
3,447,098	+				-0.5
3,447,113	-				+0.2
3,447,149	-				-1.1
3,447,149	-				+1.1
3,447,172	-				+1.0
3,447,173	+				+0.9
3,447,173	+				+0.6
3,447,173	+				+0.1
3,447,173	+				+0.7
3,447,174	-				+1.2
3,447,174	-				-0.6
3,447,174	-				+0.0
3,447,174	-				+1.5
3,447,174	-				+0.6
3,447,174	-				-1.5
3,447,174	-				-0.0
3,447,174	-				+0.3
3,447,174	-				-1.1