Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2867

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
3,436,909	+				+0.1
3,436,910	-				-0.2
3,436,913	-				+0.7
3,436,913	-				+0.3
3,436,914	+				-0.1
3,436,914	+				-0.4
3,436,915	-				-1.2
3,436,915	-				+0.5
3,436,924	+				-2.1
3,437,021	+				-1.0
3,437,022	-				+0.6
3,437,164	-		Echvi_2866	0.24	+0.8
3,437,164	-		Echvi_2866	0.24	-0.6
3,437,204	+		Echvi_2866	0.30	+0.2
3,437,205	-		Echvi_2866	0.30	-1.3
3,437,205	-		Echvi_2866	0.30	+2.6
3,437,211	-		Echvi_2866	0.31	-1.6
3,437,269	+		Echvi_2866	0.40	-0.0
3,437,270	-		Echvi_2866	0.40	+0.1
3,437,270	-		Echvi_2866	0.40	+0.2
3,437,310	-		Echvi_2866	0.46	-0.4
3,437,336	+		Echvi_2866	0.50	+0.1
3,437,477	+		Echvi_2866	0.71	-0.2
3,437,525	+		Echvi_2866	0.78	+0.3
3,437,545	-		Echvi_2866	0.81	+0.7
3,437,558	-		Echvi_2866	0.83	-0.1
3,437,618	-				-1.2
3,437,630	-				+0.8
3,437,815	+				+0.5
3,437,816	-				+0.5
3,437,816	-				-0.3
3,437,876	+				-0.0
3,437,907	+				-0.4
3,437,907	+				-1.2
3,438,013	+		Echvi_2867	0.20	-0.3
3,438,013	+		Echvi_2867	0.20	-0.1
3,438,013	+		Echvi_2867	0.20	+0.0
3,438,013	+		Echvi_2867	0.20	+1.7
3,438,014	-		Echvi_2867	0.20	+1.7
3,438,033	+		Echvi_2867	0.23	+0.4
3,438,083	-		Echvi_2867	0.30	-0.5
3,438,083	-		Echvi_2867	0.30	-0.6
3,438,129	+		Echvi_2867	0.36	+0.1
3,438,152	+		Echvi_2867	0.40	+0.3
3,438,153	-		Echvi_2867	0.40	+0.6
3,438,158	-		Echvi_2867	0.41	-0.4
3,438,158	-		Echvi_2867	0.41	-1.7
3,438,170	-		Echvi_2867	0.42	+0.8
3,438,239	-		Echvi_2867	0.52	+0.3
3,438,239	-		Echvi_2867	0.52	-1.1
3,438,239	-		Echvi_2867	0.52	-1.2
3,438,242	+		Echvi_2867	0.53	+2.1
3,438,243	-		Echvi_2867	0.53	-1.6
3,438,249	+		Echvi_2867	0.54	-0.2
3,438,250	-		Echvi_2867	0.54	+1.2
3,438,284	-		Echvi_2867	0.59	-0.4
3,438,286	+		Echvi_2867	0.59	+0.3
3,438,287	-		Echvi_2867	0.59	+0.5
3,438,289	+		Echvi_2867	0.59	+0.5
3,438,301	-		Echvi_2867	0.61	+0.1
3,438,346	-		Echvi_2867	0.68	-0.2
3,438,423	+		Echvi_2867	0.79	-0.7
3,438,423	+		Echvi_2867	0.79	+1.8
3,438,424	-		Echvi_2867	0.79	+0.4
3,438,432	-		Echvi_2867	0.80	+1.8
3,438,541	-				+1.7
3,438,548	-				+0.0
3,438,548	-				+1.6
3,438,548	-				-1.6
3,438,548	-				+1.8
3,438,554	-				+0.3
3,438,614	+		Echvi_2868	0.15	+1.5
3,438,614	+		Echvi_2868	0.15	+0.7
3,438,614	+		Echvi_2868	0.15	+0.4
3,438,660	+		Echvi_2868	0.38	+0.6
3,438,661	-		Echvi_2868	0.38	-0.5
3,438,676	-		Echvi_2868	0.46	-1.0
3,438,701	-		Echvi_2868	0.59	-0.7
3,438,767	+				+1.6
3,438,791	-				+0.5
3,438,814	-				+0.8
3,438,824	+				+0.3
3,438,825	-				+0.5
3,438,825	-				-0.2
3,438,825	-				-0.1
3,438,825	-				-0.1
3,438,826	+				+1.1
3,438,827	-				+0.8
3,438,827	-				-0.6
3,438,841	+				+0.7
3,438,867	+				+1.4
3,438,868	-				-0.7
3,438,886	+				+0.7
3,438,936	-				+0.4
3,438,936	-				+0.4
3,439,074	-				+0.3
3,439,234	+				+0.8
3,439,234	+				-2.2
3,439,234	+				-0.3
3,439,235	-				-1.1
3,439,235	-				-1.6
3,439,284	+		Echvi_2869	0.19	-0.7
3,439,284	+		Echvi_2869	0.19	+1.4
3,439,285	-		Echvi_2869	0.19	+0.9
3,439,285	-		Echvi_2869	0.19	-0.0
3,439,285	-		Echvi_2869	0.19	+0.8
3,439,285	-		Echvi_2869	0.19	+2.2
3,439,285	-		Echvi_2869	0.19	+0.4
3,439,285	-		Echvi_2869	0.19	-0.6
3,439,316	+		Echvi_2869	0.25	-0.4
3,439,316	+		Echvi_2869	0.25	+1.1
3,439,316	+		Echvi_2869	0.25	-0.8
3,439,317	-		Echvi_2869	0.25	+0.5
3,439,317	-		Echvi_2869	0.25	+0.1
3,439,395	+		Echvi_2869	0.40	-0.9
3,439,396	-		Echvi_2869	0.40	+0.1
3,439,396	-		Echvi_2869	0.40	+0.4
3,439,396	-		Echvi_2869	0.40	-0.1
3,439,406	-		Echvi_2869	0.42	+0.6
3,439,445	+		Echvi_2869	0.49	+0.3
3,439,448	+		Echvi_2869	0.49	+0.3
3,439,484	-		Echvi_2869	0.56	+0.8
3,439,484	-		Echvi_2869	0.56	-0.4
3,439,560	-		Echvi_2869	0.70	+1.2
3,439,565	-		Echvi_2869	0.71	-0.2