Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2807

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
3,353,297	+		Echvi_2806	0.38	-0.7
3,353,305	+		Echvi_2806	0.38	+0.8
3,353,305	+		Echvi_2806	0.38	+0.1
3,353,305	+		Echvi_2806	0.38	+1.5
3,353,305	+		Echvi_2806	0.38	+1.3
3,353,306	-		Echvi_2806	0.38	+0.5
3,353,306	-		Echvi_2806	0.38	+0.3
3,353,306	-		Echvi_2806	0.38	-1.7
3,353,337	-		Echvi_2806	0.41	+0.2
3,353,347	-		Echvi_2806	0.41	-0.7
3,353,395	+		Echvi_2806	0.44	+0.1
3,353,427	+		Echvi_2806	0.47	-0.3
3,353,428	-		Echvi_2806	0.47	+0.1
3,353,477	+		Echvi_2806	0.50	+0.3
3,353,478	-		Echvi_2806	0.50	-0.4
3,353,478	-		Echvi_2806	0.50	+2.3
3,353,537	+		Echvi_2806	0.54	-0.0
3,353,740	+		Echvi_2806	0.67	-0.5
3,353,741	-		Echvi_2806	0.68	+0.9
3,353,741	-		Echvi_2806	0.68	-0.7
3,353,742	+		Echvi_2806	0.68	+1.9
3,353,742	+		Echvi_2806	0.68	-0.0
3,353,743	-		Echvi_2806	0.68	+0.0
3,353,743	-		Echvi_2806	0.68	+0.1
3,353,764	+		Echvi_2806	0.69	-0.1
3,353,814	+		Echvi_2806	0.72	+0.4
3,353,814	+		Echvi_2806	0.72	-0.3
3,353,880	-		Echvi_2806	0.77	+0.4
3,353,890	+		Echvi_2806	0.77	-0.7
3,353,890	+		Echvi_2806	0.77	-0.8
3,353,891	-		Echvi_2806	0.78	-0.3
3,353,900	+		Echvi_2806	0.78	-0.1
3,353,901	-		Echvi_2806	0.78	+0.5
3,353,901	-		Echvi_2806	0.78	+1.5
3,353,904	+		Echvi_2806	0.78	-1.6
3,353,904	+		Echvi_2806	0.78	+0.3
3,353,905	-		Echvi_2806	0.78	-1.6
3,353,924	+		Echvi_2806	0.80	-0.7
3,353,924	+		Echvi_2806	0.80	-0.2
3,353,931	-		Echvi_2806	0.80	+0.4
3,353,933	-		Echvi_2806	0.80	+0.3
3,354,001	+		Echvi_2806	0.85	-0.9
3,354,001	+		Echvi_2806	0.85	+0.5
3,354,002	-		Echvi_2806	0.85	+0.2
3,354,049	-		Echvi_2806	0.88	-1.7
3,354,099	+				-1.2
3,354,099	+				+0.2
3,354,197	+				+1.9
3,354,203	+				+0.1
3,354,203	+				+1.9
3,354,205	+				-0.2
3,354,205	+				+0.5
3,354,206	-				-0.7
3,354,206	-				+1.4
3,354,216	+				-0.1
3,354,217	-				-2.9
3,354,217	-				+0.9
3,354,218	+				+0.1
3,354,218	+				-0.6
3,354,218	+				+1.6
3,354,219	-				-0.0
3,354,219	-				+0.8
3,354,275	+				-1.1
3,354,296	+				-0.6
3,354,296	+				-1.1
3,354,345	+				+1.9
3,354,345	+				-0.7
3,354,345	+				+0.7
3,354,345	+				+0.9
3,354,346	-				-0.3
3,354,346	-				+0.3
3,354,346	-				+0.6
3,354,349	-				-1.0
3,354,349	-				-1.3
3,354,349	-				-0.3
3,354,349	-				-1.3
3,354,349	-				-0.1
3,354,375	+				+1.4
3,354,458	+				+0.5
3,354,458	+				-0.9
3,354,459	-				-2.1
3,354,459	-				-1.6
3,354,459	-				-0.7
3,354,459	-				-0.0
3,354,525	+		Echvi_2807	0.14	+0.9
3,354,525	+		Echvi_2807	0.14	+0.6
3,354,717	+		Echvi_2807	0.26	+1.0
3,354,718	-		Echvi_2807	0.26	-1.9
3,354,765	+		Echvi_2807	0.29	-0.5
3,354,765	+		Echvi_2807	0.29	+0.8
3,354,766	-		Echvi_2807	0.29	-0.9
3,354,864	+		Echvi_2807	0.35	+0.1
3,354,881	+		Echvi_2807	0.36	-0.3
3,354,885	+		Echvi_2807	0.36	+1.9
3,354,899	+		Echvi_2807	0.37	-2.6
3,354,900	-		Echvi_2807	0.37	-0.6
3,354,900	-		Echvi_2807	0.37	-0.7
3,354,900	-		Echvi_2807	0.37	-0.5
3,354,900	-		Echvi_2807	0.37	-0.4
3,354,900	-		Echvi_2807	0.37	-0.9
3,354,954	+		Echvi_2807	0.40	+1.0
3,354,954	+		Echvi_2807	0.40	+2.1
3,354,954	+		Echvi_2807	0.40	-0.1
3,354,954	+		Echvi_2807	0.40	+0.6
3,354,954	+		Echvi_2807	0.40	+1.5
3,354,954	+		Echvi_2807	0.40	+0.5
3,354,955	-		Echvi_2807	0.40	-2.3
3,354,955	-		Echvi_2807	0.40	+1.5
3,354,955	-		Echvi_2807	0.40	-2.5
3,354,956	+		Echvi_2807	0.40	-0.2
3,354,956	+		Echvi_2807	0.40	-1.7
3,354,956	+		Echvi_2807	0.40	-0.1
3,354,974	+		Echvi_2807	0.41	+0.1
3,354,974	+		Echvi_2807	0.41	+0.6
3,354,974	+		Echvi_2807	0.41	+1.7
3,354,974	+		Echvi_2807	0.41	-0.9
3,354,975	-		Echvi_2807	0.41	-1.2
3,354,999	+		Echvi_2807	0.43	-0.1
3,354,999	+		Echvi_2807	0.43	-0.4
3,355,016	-		Echvi_2807	0.44	-0.1
3,355,065	-		Echvi_2807	0.47	+0.3
3,355,078	+		Echvi_2807	0.48	+0.6
3,355,226	+		Echvi_2807	0.57	+0.1
3,355,227	-		Echvi_2807	0.57	-1.2
3,355,233	+		Echvi_2807	0.57	-0.6
3,355,259	+		Echvi_2807	0.59	+0.4
3,355,259	+		Echvi_2807	0.59	-0.1
3,355,299	+		Echvi_2807	0.61	+0.5
3,355,301	+		Echvi_2807	0.61	-1.7
3,355,302	-		Echvi_2807	0.61	-0.9
3,355,360	+		Echvi_2807	0.65	-1.0
3,355,360	+		Echvi_2807	0.65	-0.0
3,355,361	-		Echvi_2807	0.65	-0.5
3,355,444	-		Echvi_2807	0.70	-0.5
3,355,448	-		Echvi_2807	0.70	-0.2
3,355,448	-		Echvi_2807	0.70	+1.9
3,355,448	-		Echvi_2807	0.70	-0.5
3,355,448	-		Echvi_2807	0.70	-0.2
3,355,448	-		Echvi_2807	0.70	-0.6
3,355,508	-		Echvi_2807	0.74	-0.8
3,355,526	+		Echvi_2807	0.75	-0.4
3,355,526	+		Echvi_2807	0.75	-0.1
3,355,529	+		Echvi_2807	0.75	-0.3
3,355,535	-		Echvi_2807	0.75	-2.0
3,355,570	-		Echvi_2807	0.77	-0.6
3,355,572	+		Echvi_2807	0.78	-1.8
3,355,604	+		Echvi_2807	0.79	-0.8
3,355,673	+		Echvi_2807	0.84	+0.9
3,355,674	-		Echvi_2807	0.84	+0.1
3,355,696	+		Echvi_2807	0.85	+0.9
3,355,699	+		Echvi_2807	0.85	+0.5
3,355,900	+				+1.5
3,355,915	+				-0.3
3,355,915	+				-0.7
3,355,916	-				-0.1
3,355,916	-				-3.4
3,355,973	-				+0.9
3,355,987	+				+0.3
3,356,033	+				-1.2
3,356,050	-				-0.8
3,356,118	-				-1.6
3,356,124	+				-0.1
3,356,128	-				-2.0
3,356,146	-				-0.8
3,356,148	-				-0.2
3,356,159	-				-0.5
3,356,187	+				-0.9
3,356,190	+				-0.5
3,356,259	+				-0.4
3,356,259	+				+1.5
3,356,264	-				-1.0
3,356,293	+				-0.0
3,356,293	+				-0.5
3,356,367	+		Echvi_2808	0.14	-0.8
3,356,391	+		Echvi_2808	0.15	+1.6
3,356,391	+		Echvi_2808	0.15	+0.5
3,356,392	-		Echvi_2808	0.15	+1.3
3,356,393	+		Echvi_2808	0.15	-0.8
3,356,393	+		Echvi_2808	0.15	+1.5
3,356,406	+		Echvi_2808	0.16	+0.1
3,356,429	+		Echvi_2808	0.18	-0.7
3,356,429	+		Echvi_2808	0.18	+1.6
3,356,430	-		Echvi_2808	0.18	-1.1
3,356,581	+		Echvi_2808	0.26	-0.9
3,356,601	+		Echvi_2808	0.27	+0.7
3,356,601	+		Echvi_2808	0.27	-0.8
3,356,602	-		Echvi_2808	0.27	-0.4
3,356,646	+		Echvi_2808	0.30	+1.1
3,356,646	+		Echvi_2808	0.30	+0.9
3,356,646	+		Echvi_2808	0.30	-1.0
3,356,646	+		Echvi_2808	0.30	-0.4
3,356,647	-		Echvi_2808	0.30	-0.4
3,356,652	+		Echvi_2808	0.30	-0.5
3,356,652	+		Echvi_2808	0.30	+0.4
3,356,652	+		Echvi_2808	0.30	+0.6
3,356,653	-		Echvi_2808	0.30	-0.3
3,356,653	-		Echvi_2808	0.30	-1.7
3,356,653	-		Echvi_2808	0.30	-0.7
3,356,653	-		Echvi_2808	0.30	-0.3
3,356,653	-		Echvi_2808	0.30	-1.3
3,356,653	-		Echvi_2808	0.30	-0.1
3,356,654	+		Echvi_2808	0.30	+1.5
3,356,685	+		Echvi_2808	0.32	-0.4
3,356,686	-		Echvi_2808	0.32	-0.7
3,356,692	+		Echvi_2808	0.33	-1.3
3,356,705	-		Echvi_2808	0.33	+0.9
3,356,709	-		Echvi_2808	0.34	-1.8
3,356,713	+		Echvi_2808	0.34	-1.0
3,356,713	+		Echvi_2808	0.34	+2.9
3,356,721	+		Echvi_2808	0.34	+0.3
3,356,813	+		Echvi_2808	0.40	+0.6
3,356,813	+		Echvi_2808	0.40	-0.5
3,356,813	+		Echvi_2808	0.40	+2.5
3,356,813	+		Echvi_2808	0.40	-0.1
3,356,813	+		Echvi_2808	0.40	+1.0
3,356,814	-		Echvi_2808	0.40	-1.6
3,356,814	-		Echvi_2808	0.40	-0.5
3,356,814	-		Echvi_2808	0.40	+0.6
3,356,827	+		Echvi_2808	0.40	-0.8
3,356,907	-		Echvi_2808	0.45	-0.7
3,356,928	+		Echvi_2808	0.46	+0.6
3,356,933	+		Echvi_2808	0.46	-0.7
3,356,933	+		Echvi_2808	0.46	-0.1
3,356,933	+		Echvi_2808	0.46	-1.6
3,356,933	+		Echvi_2808	0.46	+1.6
3,356,933	+		Echvi_2808	0.46	-0.3
3,356,934	-		Echvi_2808	0.47	-1.8
3,356,934	-		Echvi_2808	0.47	+0.1
3,356,939	-		Echvi_2808	0.47	-0.4