Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2782

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
3,324,323	+		Echvi_2781	0.70	-1.9
3,324,323	+		Echvi_2781	0.70	-0.4
3,324,324	-		Echvi_2781	0.70	-1.2
3,324,328	+		Echvi_2781	0.70	-0.4
3,324,328	+		Echvi_2781	0.70	+0.4
3,324,328	+		Echvi_2781	0.70	+0.1
3,324,329	-		Echvi_2781	0.70	-0.1
3,324,329	-		Echvi_2781	0.70	-0.5
3,324,462	+		Echvi_2781	0.74	-0.9
3,324,463	-		Echvi_2781	0.74	-1.4
3,324,463	-		Echvi_2781	0.74	+0.7
3,324,463	-		Echvi_2781	0.74	-0.2
3,324,463	-		Echvi_2781	0.74	-0.9
3,324,463	-		Echvi_2781	0.74	-1.1
3,324,463	-		Echvi_2781	0.74	-1.0
3,324,463	-		Echvi_2781	0.74	-0.0
3,324,490	+		Echvi_2781	0.75	+1.6
3,324,490	+		Echvi_2781	0.75	-1.4
3,324,499	+		Echvi_2781	0.76	-1.0
3,324,499	+		Echvi_2781	0.76	-1.1
3,324,499	+		Echvi_2781	0.76	-1.3
3,324,500	-		Echvi_2781	0.76	+0.4
3,324,519	+		Echvi_2781	0.76	-0.3
3,324,532	-		Echvi_2781	0.77	-1.1
3,324,674	-		Echvi_2781	0.81	-1.4
3,324,686	-		Echvi_2781	0.82	+0.6
3,324,686	-		Echvi_2781	0.82	-0.2
3,324,697	-		Echvi_2781	0.82	+0.0
3,324,707	+		Echvi_2781	0.82	+0.3
3,324,749	+		Echvi_2781	0.84	-0.4
3,324,760	-		Echvi_2781	0.84	-1.5
3,324,800	-		Echvi_2781	0.85	-0.3
3,324,837	+		Echvi_2781	0.86	-2.2
3,324,837	+		Echvi_2781	0.86	-0.6
3,324,837	+		Echvi_2781	0.86	-0.4
3,324,837	+		Echvi_2781	0.86	-1.7
3,324,852	+		Echvi_2781	0.87	-0.9
3,324,953	-				+0.9
3,324,961	-				-1.0
3,325,021	+				-1.9
3,325,039	-				-1.3
3,325,067	+				-0.5
3,325,068	-				-0.7
3,325,068	-				-0.0
3,325,140	+				-3.2
3,325,196	-				+0.3
3,325,235	-				-1.0
3,325,253	-				-0.4
3,325,286	-				-0.7
3,325,324	+				-0.4
3,325,325	-				+0.4
3,325,325	-				+0.1
3,325,325	-				-0.1
3,325,357	-				-0.0
3,325,423	+				-0.3
3,325,433	+				-2.0
3,325,434	-				-0.6
3,325,434	-				-1.0
3,325,465	+		Echvi_2782	0.12	-0.8
3,325,465	+		Echvi_2782	0.12	-0.0
3,325,465	+		Echvi_2782	0.12	+1.9
3,325,465	+		Echvi_2782	0.12	-1.4
3,325,465	+		Echvi_2782	0.12	+0.7
3,325,465	+		Echvi_2782	0.12	-1.8
3,325,466	-		Echvi_2782	0.12	-1.8
3,325,466	-		Echvi_2782	0.12	+0.3
3,325,466	-		Echvi_2782	0.12	-0.9
3,325,466	-		Echvi_2782	0.12	+0.4
3,325,466	-		Echvi_2782	0.12	-1.6
3,325,466	-		Echvi_2782	0.12	+0.2
3,325,466	-		Echvi_2782	0.12	+0.9
3,325,466	-		Echvi_2782	0.12	-0.2
3,325,466	-		Echvi_2782	0.12	-0.0
3,325,493	+		Echvi_2782	0.15	-1.1
3,325,540	+		Echvi_2782	0.19	-0.4
3,325,597	-		Echvi_2782	0.24	-0.7
3,325,614	+		Echvi_2782	0.25	-0.1
3,325,620	-		Echvi_2782	0.26	-0.3
3,325,620	-		Echvi_2782	0.26	+0.2
3,325,733	-		Echvi_2782	0.35	-0.1
3,325,770	+		Echvi_2782	0.39	-1.4
3,325,771	-		Echvi_2782	0.39	-0.3
3,325,771	-		Echvi_2782	0.39	-0.3
3,325,771	-		Echvi_2782	0.39	-1.2
3,325,772	+		Echvi_2782	0.39	-0.9
3,325,773	-		Echvi_2782	0.39	-2.0
3,325,773	-		Echvi_2782	0.39	-0.6
3,325,804	+		Echvi_2782	0.42	-0.4
3,325,804	+		Echvi_2782	0.42	-0.1
3,325,805	-		Echvi_2782	0.42	-0.1
3,325,813	+		Echvi_2782	0.42	+0.4
3,325,814	-		Echvi_2782	0.43	-0.5
3,325,814	-		Echvi_2782	0.43	+0.2
3,325,827	+		Echvi_2782	0.44	-0.4
3,325,827	+		Echvi_2782	0.44	+2.5
3,325,827	+		Echvi_2782	0.44	+0.3
3,325,832	+		Echvi_2782	0.44	+0.2
3,325,837	+		Echvi_2782	0.45	+1.5
3,325,837	+		Echvi_2782	0.45	-0.2
3,325,838	-		Echvi_2782	0.45	-0.1
3,325,838	-		Echvi_2782	0.45	-1.3
3,325,845	+		Echvi_2782	0.45	+0.2
3,325,845	+		Echvi_2782	0.45	+0.9
3,325,845	+		Echvi_2782	0.45	-1.7
3,325,845	+		Echvi_2782	0.45	-0.9
3,325,845	+		Echvi_2782	0.45	-0.9
3,325,845	+		Echvi_2782	0.45	-2.5
3,325,845	+		Echvi_2782	0.45	-0.4
3,325,845	+		Echvi_2782	0.45	-0.5
3,325,846	-		Echvi_2782	0.45	+0.0
3,325,846	-		Echvi_2782	0.45	+1.1
3,325,898	+		Echvi_2782	0.50	-2.4
3,325,902	+		Echvi_2782	0.50	-0.9
3,325,902	+		Echvi_2782	0.50	-0.2
3,325,902	+		Echvi_2782	0.50	+0.9
3,325,903	-		Echvi_2782	0.50	+0.2
3,325,907	+		Echvi_2782	0.51	+2.2
3,325,907	+		Echvi_2782	0.51	-1.3
3,325,915	-		Echvi_2782	0.51	-0.0
3,325,919	+		Echvi_2782	0.52	-0.1
3,325,923	+		Echvi_2782	0.52	-0.9
3,325,923	+		Echvi_2782	0.52	-0.5
3,325,924	-		Echvi_2782	0.52	+0.5
3,325,924	-		Echvi_2782	0.52	-0.4
3,325,927	-		Echvi_2782	0.52	-0.3
3,325,985	-		Echvi_2782	0.57	+0.3
3,326,047	-		Echvi_2782	0.63	+0.2
3,326,072	+		Echvi_2782	0.65	-0.6
3,326,093	+		Echvi_2782	0.67	-2.2
3,326,093	+		Echvi_2782	0.67	-0.4
3,326,093	+		Echvi_2782	0.67	+0.1
3,326,094	-		Echvi_2782	0.67	-1.4
3,326,094	-		Echvi_2782	0.67	-0.7
3,326,097	+		Echvi_2782	0.67	-1.6
3,326,098	-		Echvi_2782	0.67	-1.9
3,326,104	+		Echvi_2782	0.68	-1.7
3,326,218	+		Echvi_2782	0.77	-1.6
3,326,219	-		Echvi_2782	0.78	+0.3
3,326,223	-		Echvi_2782	0.78	-1.4
3,326,223	-		Echvi_2782	0.78	-0.1
3,326,238	+		Echvi_2782	0.79	-2.0
3,326,304	+		Echvi_2782	0.85	-0.1
3,326,305	-		Echvi_2782	0.85	-1.3
3,326,308	+		Echvi_2782	0.85	-0.7
3,326,309	-		Echvi_2782	0.85	-1.0
3,326,309	-		Echvi_2782	0.85	-0.9
3,326,309	-		Echvi_2782	0.85	-0.9
3,326,340	+		Echvi_2782	0.88	-0.2
3,326,340	+		Echvi_2782	0.88	-0.7
3,326,341	-		Echvi_2782	0.88	-0.9
3,326,414	-				-2.4
3,326,436	+				+0.3
3,326,437	-				-2.6
3,326,437	-				-0.4
3,326,485	+				-1.3
3,326,505	-				+0.9
3,326,517	-				+0.7
3,326,644	+				-1.7
3,326,645	-				+0.2
3,326,851	+				+0.6
3,327,183	-		Echvi_2783	0.25	+0.7
3,327,335	+		Echvi_2783	0.34	+0.7
3,327,337	+		Echvi_2783	0.34	+0.9
3,327,337	+		Echvi_2783	0.34	+2.6
3,327,337	+		Echvi_2783	0.34	+2.5
3,327,338	-		Echvi_2783	0.34	+1.1
3,327,338	-		Echvi_2783	0.34	+0.7
3,327,338	-		Echvi_2783	0.34	-0.9
3,327,338	-		Echvi_2783	0.34	+1.2
3,327,338	-		Echvi_2783	0.34	-0.7
3,327,338	-		Echvi_2783	0.34	-2.4
3,327,340	+		Echvi_2783	0.34	+0.9
3,327,340	+		Echvi_2783	0.34	-1.7
3,327,341	-		Echvi_2783	0.34	+0.2
3,327,341	-		Echvi_2783	0.34	+0.3