Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2769

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
3,305,040	+		Echvi_2767	0.75	-1.0
3,305,063	-		Echvi_2767	0.76	+1.5
3,305,063	-		Echvi_2767	0.76	-1.0
3,305,189	-		Echvi_2767	0.79	+1.0
3,305,223	+		Echvi_2767	0.80	+1.5
3,305,223	+		Echvi_2767	0.80	+1.4
3,305,223	+		Echvi_2767	0.80	-0.7
3,305,224	-		Echvi_2767	0.80	-0.2
3,305,339	-		Echvi_2767	0.83	+0.5
3,305,339	-		Echvi_2767	0.83	-0.2
3,305,339	-		Echvi_2767	0.83	-1.0
3,305,380	-		Echvi_2767	0.84	-0.4
3,305,410	-		Echvi_2767	0.85	+0.2
3,305,474	+		Echvi_2767	0.87	+0.8
3,305,501	-		Echvi_2767	0.88	+0.9
3,305,564	-		Echvi_2767	0.89	+0.6
3,305,564	-		Echvi_2767	0.89	-2.0
3,305,565	+		Echvi_2767	0.89	+0.3
3,305,565	+		Echvi_2767	0.89	+0.7
3,305,566	-		Echvi_2767	0.89	-0.9
3,305,566	-		Echvi_2767	0.89	-0.2
3,305,566	-		Echvi_2767	0.89	-0.4
3,305,616	-				-0.2
3,305,640	+				+0.5
3,305,677	+				+0.0
3,305,677	+				+0.2
3,305,678	-				+0.3
3,305,678	-				-1.0
3,305,681	-				+0.9
3,305,731	+				-0.2
3,305,731	+				-1.1
3,305,732	-				-0.5
3,305,732	-				-0.0
3,305,732	-				-0.4
3,305,732	-				-0.4
3,305,733	+				-0.7
3,305,734	-				+0.3
3,305,814	+				+0.1
3,305,815	-				-0.2
3,305,818	+				-0.4
3,305,818	+				-1.1
3,305,819	-				-0.3
3,305,820	+				+0.3
3,305,956	+				-0.0
3,306,016	-				+0.3
3,306,018	+				+0.3
3,306,018	+				-2.1
3,306,034	-				+1.4
3,306,046	-				-1.9
3,306,050	-				+0.0
3,306,112	-				+2.1
3,306,133	+				+1.1
3,306,133	+				-2.5
3,306,136	+				-1.4
3,306,155	+				-1.5
3,306,155	+				+1.3
3,306,155	+				-2.1
3,306,155	+				+1.1
3,306,156	-				-0.7
3,306,156	-				+0.3
3,306,156	-				+2.5
3,306,158	-				-0.1
3,306,158	-				-1.3
3,306,158	-				-0.6
3,306,158	-				-0.0
3,306,243	-		Echvi_2769	0.12	-1.4
3,306,326	-		Echvi_2769	0.16	-0.0
3,306,329	-		Echvi_2769	0.16	-0.7
3,306,363	+				-0.1
3,306,363	+		Echvi_2769	0.18	+0.7
3,306,364	-		Echvi_2769	0.18	-0.6
3,306,368	+		Echvi_2769	0.18	-0.2
3,306,384	-		Echvi_2769	0.19	-0.7
3,306,457	-		Echvi_2769	0.22	+0.9
3,306,529	+		Echvi_2769	0.26	-1.4
3,306,542	+		Echvi_2769	0.26	+1.1
3,306,543	-		Echvi_2769	0.26	-0.7
3,306,543	-		Echvi_2769	0.26	-0.4
3,306,543	-		Echvi_2769	0.26	+0.4
3,306,558	-		Echvi_2769	0.27	+0.1
3,306,560	+		Echvi_2769	0.27	-0.1
3,306,560	+		Echvi_2769	0.27	-0.9
3,306,561	-		Echvi_2769	0.27	-0.5
3,306,566	+		Echvi_2769	0.27	-1.0
3,306,705	-		Echvi_2769	0.34	+0.4
3,306,705	-		Echvi_2769	0.34	-0.4
3,306,705	-		Echvi_2769	0.34	-0.6
3,306,706	+		Echvi_2769	0.34	-1.6
3,306,706	+		Echvi_2769	0.34	-0.7
3,306,707	-		Echvi_2769	0.34	+1.6
3,306,709	+		Echvi_2769	0.34	-0.9
3,306,793	-		Echvi_2769	0.38	-1.1
3,306,793	-		Echvi_2769	0.38	+0.0
3,306,805	+		Echvi_2769	0.38	-0.4
3,306,805	+		Echvi_2769	0.38	-1.4
3,306,806	-		Echvi_2769	0.38	-0.2
3,306,806	-		Echvi_2769	0.38	+1.1
3,306,806	-		Echvi_2769	0.38	+0.1
3,306,812	+		Echvi_2769	0.39	+0.5
3,306,812	+		Echvi_2769	0.39	-0.1
3,306,820	-		Echvi_2769	0.39	+0.0
3,306,914	+		Echvi_2769	0.43	+0.3
3,306,914	+		Echvi_2769	0.43	-0.7
3,306,915	-		Echvi_2769	0.43	-0.8
3,306,949	+		Echvi_2769	0.45	-0.4
3,306,949	+		Echvi_2769	0.45	+1.5
3,306,950	-		Echvi_2769	0.45	-0.3
3,306,950	-		Echvi_2769	0.45	+1.9
3,306,950	-		Echvi_2769	0.45	+1.9
3,306,953	+		Echvi_2769	0.45	+0.3
3,306,954	-		Echvi_2769	0.45	+0.1
3,306,954	-		Echvi_2769	0.45	-2.1
3,306,954	-		Echvi_2769	0.45	+0.6
3,306,954	-		Echvi_2769	0.45	-0.1
3,306,967	+		Echvi_2769	0.46	-0.1
3,306,971	-		Echvi_2769	0.46	+1.8
3,307,012	+		Echvi_2769	0.48	+0.4
3,307,105	-		Echvi_2769	0.52	-0.7
3,307,158	-		Echvi_2769	0.54	+1.0
3,307,163	-		Echvi_2769	0.55	-0.6
3,307,163	-				+1.1
3,307,163	-		Echvi_2769	0.55	+0.9
3,307,163	-		Echvi_2769	0.55	-0.9
3,307,166	+		Echvi_2769	0.55	-0.4
3,307,166	+		Echvi_2769	0.55	-1.4
3,307,167	-		Echvi_2769	0.55	+0.1
3,307,167	-		Echvi_2769	0.55	-1.0
3,307,200	+		Echvi_2769	0.56	-1.0
3,307,211	-		Echvi_2769	0.57	+0.6
3,307,318	+		Echvi_2769	0.62	-1.6
3,307,340	+		Echvi_2769	0.63	-0.4
3,307,341	-		Echvi_2769	0.63	-0.8
3,307,344	+		Echvi_2769	0.63	-1.3
3,307,344	+		Echvi_2769	0.63	-0.4
3,307,347	+		Echvi_2769	0.63	-1.4
3,307,398	-		Echvi_2769	0.65	+1.0
3,307,398	-		Echvi_2769	0.65	+1.7
3,307,561	+		Echvi_2769	0.73	+0.6
3,307,562	-		Echvi_2769	0.73	-0.2
3,307,566	+		Echvi_2769	0.73	-0.6
3,307,653	+		Echvi_2769	0.77	-1.1
3,307,708	+		Echvi_2769	0.80	-0.9
3,307,708	+		Echvi_2769	0.80	+0.3
3,307,715	-		Echvi_2769	0.80	+0.8
3,307,719	+		Echvi_2769	0.80	-2.0
3,307,719	+		Echvi_2769	0.80	+0.9
3,307,720	-		Echvi_2769	0.80	-0.6
3,307,763	+		Echvi_2769	0.82	-0.8
3,307,763	+		Echvi_2769	0.82	-1.1
3,307,763	+		Echvi_2769	0.82	-0.4
3,307,764	-		Echvi_2769	0.82	+0.3
3,307,764	-		Echvi_2769	0.82	-1.4
3,307,764	-		Echvi_2769	0.82	-1.2
3,307,766	-		Echvi_2769	0.82	+0.0
3,308,119	-				-1.0
3,308,157	-				-2.1
3,308,169	+				-1.6
3,308,173	+				-1.9
3,308,186	+				+1.3
3,308,398	+		Echvi_2770	0.11	-0.4
3,308,500	-		Echvi_2770	0.17	+0.6
3,308,500	-		Echvi_2770	0.17	-0.1
3,308,523	-		Echvi_2770	0.18	+1.4
3,308,636	-		Echvi_2770	0.24	+1.3
3,308,747	-		Echvi_2770	0.30	-0.1
3,308,784	-		Echvi_2770	0.32	+0.6
3,308,784	-		Echvi_2770	0.32	-0.3
3,308,786	-		Echvi_2770	0.32	+0.6
3,308,834	-		Echvi_2770	0.35	-2.7
3,308,840	+		Echvi_2770	0.35	-0.4
3,308,841	-		Echvi_2770	0.35	+0.1
3,308,842	+		Echvi_2770	0.35	+2.1
3,308,843	-		Echvi_2770	0.36	-0.1
3,308,871	+		Echvi_2770	0.37	-0.3
3,308,871	+		Echvi_2770	0.37	-0.8
3,309,000	+		Echvi_2770	0.44	-1.7
3,309,050	+		Echvi_2770	0.47	-0.7
3,309,051	-		Echvi_2770	0.47	+0.0
3,309,051	-		Echvi_2770	0.47	+0.7
3,309,079	+		Echvi_2770	0.48	+1.3
3,309,108	-		Echvi_2770	0.50	-0.2