Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2752

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
3,273,026	+				+0.1
3,273,040	+				-0.4
3,273,040	+				-0.1
3,273,041	-				+1.4
3,273,161	+				-0.2
3,273,162	-				+0.7
3,273,164	+				+1.4
3,273,193	+				+1.2
3,273,291	+		Echvi_2751	0.18	+0.9
3,273,292	-		Echvi_2751	0.18	-0.1
3,273,292	-		Echvi_2751	0.18	+0.9
3,273,293	+		Echvi_2751	0.18	+0.3
3,273,293	+		Echvi_2751	0.18	-0.0
3,273,293	+		Echvi_2751	0.18	+0.7
3,273,293	+		Echvi_2751	0.18	+1.3
3,273,294	-		Echvi_2751	0.18	+0.8
3,273,296	+		Echvi_2751	0.19	+0.5
3,273,296	+		Echvi_2751	0.19	+0.3
3,273,296	+		Echvi_2751	0.19	-0.1
3,273,297	-		Echvi_2751	0.19	+1.0
3,273,297	-		Echvi_2751	0.19	+0.2
3,273,297	-		Echvi_2751	0.19	+0.6
3,273,334	+		Echvi_2751	0.25	+0.5
3,273,375	-		Echvi_2751	0.32	+0.6
3,273,595	+		Echvi_2751	0.69	-0.5
3,273,676	+		Echvi_2751	0.82	+1.7
3,273,676	+		Echvi_2751	0.82	-0.1
3,273,692	+		Echvi_2751	0.85	-0.1
3,273,735	-				+0.0
3,273,737	+				+2.0
3,273,737	+				+0.5
3,273,780	-				-0.9
3,273,801	-				+0.5
3,273,856	+				-0.1
3,273,857	-				+1.1
3,273,919	-				+0.3
3,273,922	-				+1.1
3,273,956	+				-1.4
3,273,956	+				-1.7
3,273,978	-				-0.1
3,273,979	+				+2.9
3,273,979	+				+0.7
3,273,980	-				-1.1
3,273,999	-				+0.0
3,273,999	-				+0.3
3,274,026	+				+1.9
3,274,027	-				-0.6
3,274,109	+		Echvi_2752	0.11	-3.4
3,274,126	-		Echvi_2752	0.13	-0.4
3,274,201	+		Echvi_2752	0.20	-0.1
3,274,201	+		Echvi_2752	0.20	-1.0
3,274,201	+		Echvi_2752	0.20	+0.9
3,274,201	+		Echvi_2752	0.20	-0.2
3,274,202	-		Echvi_2752	0.20	+1.9
3,274,202	-		Echvi_2752	0.20	-0.2
3,274,202	-		Echvi_2752	0.20	-1.1
3,274,320	-		Echvi_2752	0.32	-0.0
3,274,320	-		Echvi_2752	0.32	+0.4
3,274,320	-		Echvi_2752	0.32	+2.6
3,274,321	+		Echvi_2752	0.32	+0.9
3,274,321	+		Echvi_2752	0.32	-2.8
3,274,322	-		Echvi_2752	0.32	+0.4
3,274,426	+		Echvi_2752	0.43	-1.2
3,274,427	-		Echvi_2752	0.43	+0.2
3,274,474	-		Echvi_2752	0.48	+0.3
3,274,493	+		Echvi_2752	0.50	-2.0
3,274,493	+		Echvi_2752	0.50	-0.2
3,274,560	+		Echvi_2752	0.56	+0.1
3,274,560	+		Echvi_2752	0.56	-2.2
3,274,561	-		Echvi_2752	0.57	-0.5
3,274,567	-		Echvi_2752	0.57	+0.3
3,274,620	+		Echvi_2752	0.63	+0.3
3,274,641	+		Echvi_2752	0.65	-1.1
3,274,722	+		Echvi_2752	0.73	-0.7
3,274,740	+		Echvi_2752	0.75	-1.9
3,274,754	+		Echvi_2752	0.76	-1.8
3,274,756	+		Echvi_2752	0.76	-1.1
3,274,822	+		Echvi_2752	0.83	-0.5
3,274,822	+		Echvi_2752	0.83	-0.6
3,274,840	+		Echvi_2752	0.85	-2.3
3,274,909	-				-0.9
3,274,909	-				+0.2
3,274,909	-				+1.5
3,274,909	-				-1.2
3,274,909	-				+0.1
3,274,975	-				-0.1
3,275,009	+				+2.1
3,275,009	+				+0.5
3,275,009	+				+1.9
3,275,010	-				+0.9
3,275,010	-				-0.3
3,275,118	-				-0.2
3,275,157	-				-1.9
3,275,161	+				+0.7
3,275,161	+				-0.4
3,275,341	+				+0.2
3,275,341	+				+0.3
3,275,342	-				-0.9
3,275,405	+		Echvi_2753	0.12	-1.6
3,275,406	-		Echvi_2753	0.12	+0.4
3,275,436	-		Echvi_2753	0.13	-0.1
3,275,483	+		Echvi_2753	0.14	-0.9
3,275,486	+		Echvi_2753	0.14	+0.1
3,275,486	+		Echvi_2753	0.14	-1.1
3,275,486	+		Echvi_2753	0.14	-0.0
3,275,486	+		Echvi_2753	0.14	+2.5
3,275,487	-		Echvi_2753	0.14	+0.4
3,275,487	-		Echvi_2753	0.14	+1.5
3,275,489	+		Echvi_2753	0.14	+0.2
3,275,490	-		Echvi_2753	0.14	+0.4
3,275,541	-		Echvi_2753	0.16	+1.3
3,275,608	+				+1.9
3,275,635	+		Echvi_2753	0.19	+0.4
3,275,636	-		Echvi_2753	0.19	+0.3
3,275,636	-		Echvi_2753	0.19	-0.7
3,275,659	+		Echvi_2753	0.19	-0.2
3,275,659	+		Echvi_2753	0.19	-0.1
3,275,692	-		Echvi_2753	0.20	-0.4
3,275,692	-		Echvi_2753	0.20	-0.4
3,275,718	-		Echvi_2753	0.21	+0.7
3,275,718	-		Echvi_2753	0.21	+1.3
3,275,738	-		Echvi_2753	0.22	-0.4
3,275,798	+		Echvi_2753	0.24	-0.4
3,275,799	-		Echvi_2753	0.24	+1.3
3,275,869	+		Echvi_2753	0.26	-0.4
3,275,901	+		Echvi_2753	0.27	-0.2
3,275,901	+		Echvi_2753	0.27	-1.0
3,275,901	+		Echvi_2753	0.27	-1.2
3,275,902	-		Echvi_2753	0.27	-1.1
3,275,902	-		Echvi_2753	0.27	-0.0
3,275,902	-		Echvi_2753	0.27	+1.5
3,275,923	+		Echvi_2753	0.27	-1.5
3,275,990	+		Echvi_2753	0.29	+0.6