Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2747

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
3,267,281	+		Echvi_2746	0.55	+0.4
3,267,281	+		Echvi_2746	0.55	+0.3
3,267,281	+		Echvi_2746	0.55	-0.6
3,267,282	-		Echvi_2746	0.55	-0.1
3,267,282	-		Echvi_2746	0.55	-1.6
3,267,282	-		Echvi_2746	0.55	-0.3
3,267,291	-		Echvi_2746	0.56	+0.2
3,267,300	-		Echvi_2746	0.56	+0.3
3,267,321	-		Echvi_2746	0.58	+0.5
3,267,325	-		Echvi_2746	0.58	-0.1
3,267,398	+		Echvi_2746	0.63	+1.5
3,267,398	+		Echvi_2746	0.63	-0.2
3,267,399	-		Echvi_2746	0.63	-2.3
3,267,399	-		Echvi_2746	0.63	+1.1
3,267,616	+		Echvi_2746	0.76	+0.3
3,267,617	-		Echvi_2746	0.76	+0.2
3,267,819	+		Echvi_2746	0.89	-0.4
3,267,820	-		Echvi_2746	0.89	+0.7
3,267,820	-		Echvi_2746	0.89	+0.6
3,267,820	-		Echvi_2746	0.89	+0.1
3,267,829	+		Echvi_2746	0.90	-0.3
3,267,830	-		Echvi_2746	0.90	-1.0
3,267,835	+				-2.2
3,267,864	+				-2.2
3,267,864	+				-0.2
3,267,986	+				-0.8
3,267,986	+				-1.8
3,267,986	+				+0.1
3,267,986	+				+1.9
3,267,989	+				-0.2
3,267,990	-				-1.8
3,267,990	-				+0.0
3,268,011	-				+2.5
3,268,029	+				-1.1
3,268,079	-				+0.9
3,268,089	-				+0.0
3,268,177	-				+0.3
3,268,179	-				-1.3
3,268,181	+				-0.7
3,268,209	+				+1.2
3,268,230	+				-0.3
3,268,233	+				+2.9
3,268,375	+		Echvi_2747	0.16	-1.4
3,268,375	+		Echvi_2747	0.16	-0.7
3,268,379	+		Echvi_2747	0.16	-2.9
3,268,380	-		Echvi_2747	0.16	-0.7
3,268,387	+		Echvi_2747	0.17	-0.2
3,268,387	+		Echvi_2747	0.17	-0.6
3,268,388	-		Echvi_2747	0.17	-0.4
3,268,421	+		Echvi_2747	0.20	-0.4
3,268,421	+		Echvi_2747	0.20	-0.9
3,268,490	-		Echvi_2747	0.27	+1.6
3,268,501	+		Echvi_2747	0.28	-1.8
3,268,502	-		Echvi_2747	0.28	+0.1
3,268,565	+		Echvi_2747	0.35	-0.3
3,268,565	+		Echvi_2747	0.35	+0.3
3,268,566	-		Echvi_2747	0.35	-1.0
3,268,568	+		Echvi_2747	0.35	-1.1
3,268,569	-		Echvi_2747	0.35	+1.7
3,268,569	-		Echvi_2747	0.35	-2.4
3,268,593	+		Echvi_2747	0.37	-0.6
3,268,594	-		Echvi_2747	0.37	+0.3
3,268,754	+		Echvi_2747	0.53	-0.0
3,268,754	+		Echvi_2747	0.53	+0.3
3,268,754	+		Echvi_2747	0.53	+0.8
3,268,755	-		Echvi_2747	0.53	-0.3
3,268,755	-		Echvi_2747	0.53	-0.6
3,268,757	+		Echvi_2747	0.54	-0.7
3,268,757	+		Echvi_2747	0.54	-0.6
3,268,757	+		Echvi_2747	0.54	-2.1
3,268,757	+		Echvi_2747	0.54	-2.0
3,268,758	-		Echvi_2747	0.54	+0.1
3,268,777	+		Echvi_2747	0.56	-0.7
3,268,778	-		Echvi_2747	0.56	+0.9
3,268,778	-		Echvi_2747	0.56	-0.3
3,268,778	-		Echvi_2747	0.56	-0.4
3,268,778	-		Echvi_2747	0.56	-0.4
3,268,792	-		Echvi_2747	0.57	+2.7
3,268,792	-		Echvi_2747	0.57	-0.2
3,268,839	-		Echvi_2747	0.62	-0.4
3,268,863	-		Echvi_2747	0.64	+0.1
3,268,885	+		Echvi_2747	0.66	-0.3
3,268,889	-		Echvi_2747	0.67	+1.0
3,268,897	+		Echvi_2747	0.67	+0.2
3,268,905	-		Echvi_2747	0.68	+0.7
3,268,943	+		Echvi_2747	0.72	-1.1
3,268,956	-		Echvi_2747	0.73	-0.3
3,269,079	-		Echvi_2747	0.85	-0.2
3,269,081	+		Echvi_2747	0.86	+1.9
3,269,082	-		Echvi_2747	0.86	+0.5
3,269,084	-		Echvi_2747	0.86	+0.6
3,269,095	+		Echvi_2747	0.87	+0.3
3,269,095	+		Echvi_2747	0.87	-2.3
3,269,186	-				+0.1
3,269,242	-				-0.1
3,269,307	-				-0.4
3,269,325	-				+0.0
3,269,362	-				+0.2
3,269,362	-				-0.0
3,269,380	-				-1.6
3,269,386	+				+0.1
3,269,387	-				+0.9
3,269,686	+		Echvi_2748	0.24	-0.5
3,269,686	+		Echvi_2748	0.24	-0.1
3,269,697	+		Echvi_2748	0.25	+1.1
3,269,699	+		Echvi_2748	0.26	-0.1
3,269,699	+		Echvi_2748	0.26	-0.1
3,269,699	+		Echvi_2748	0.26	-2.8
3,269,700	-		Echvi_2748	0.26	+1.1
3,269,703	+		Echvi_2748	0.26	+0.1
3,269,703	+		Echvi_2748	0.26	+0.8
3,269,900	+		Echvi_2748	0.43	+0.4
3,269,903	+		Echvi_2748	0.43	-1.1
3,269,904	-		Echvi_2748	0.43	+0.4
3,269,904	-		Echvi_2748	0.43	+2.0
3,269,904	-		Echvi_2748	0.43	-0.9
3,269,920	+		Echvi_2748	0.45	-1.1
3,269,920	+		Echvi_2748	0.45	+1.7
3,269,945	+		Echvi_2748	0.47	-0.9
3,269,961	+		Echvi_2748	0.48	+0.5
3,269,962	-		Echvi_2748	0.48	-0.4
3,269,986	+		Echvi_2748	0.51	+0.5
3,269,986	+		Echvi_2748	0.51	-1.4
3,269,986	+		Echvi_2748	0.51	-0.9
3,269,986	+		Echvi_2748	0.51	+0.9
3,269,987	-		Echvi_2748	0.51	-0.4
3,269,988	+		Echvi_2748	0.51	+0.6
3,270,025	+		Echvi_2748	0.54	+0.7
3,270,026	-		Echvi_2748	0.54	+0.8
3,270,071	+		Echvi_2748	0.58	-0.3
3,270,072	-		Echvi_2748	0.58	+0.7
3,270,072	-		Echvi_2748	0.58	+1.2
3,270,072	-		Echvi_2748	0.58	-0.4
3,270,072	-		Echvi_2748	0.58	+1.0
3,270,072	-		Echvi_2748	0.58	+0.4
3,270,075	+		Echvi_2748	0.58	-0.1
3,270,076	-		Echvi_2748	0.58	-0.4
3,270,076	-		Echvi_2748	0.58	-1.6
3,270,136	+		Echvi_2748	0.64	+0.6
3,270,136	+		Echvi_2748	0.64	+0.0
3,270,137	-		Echvi_2748	0.64	+0.0
3,270,137	-		Echvi_2748	0.64	-1.9
3,270,190	-		Echvi_2748	0.68	-0.6