Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2726

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
3,244,584	-		Echvi_2725	0.14	-0.3
3,244,584	-		Echvi_2725	0.14	-0.1
3,244,657	-		Echvi_2725	0.22	-0.7
3,244,657	-		Echvi_2725	0.22	-1.6
3,244,657	-		Echvi_2725	0.22	-1.1
3,244,677	+		Echvi_2725	0.24	+0.8
3,244,763	-		Echvi_2725	0.33	+0.7
3,244,766	+		Echvi_2725	0.33	+3.2
3,244,766	+		Echvi_2725	0.33	-1.3
3,244,767	-		Echvi_2725	0.33	-1.5
3,244,767	-		Echvi_2725	0.33	-2.3
3,244,767	-		Echvi_2725	0.33	+0.4
3,244,901	+		Echvi_2725	0.47	-1.0
3,244,907	+		Echvi_2725	0.47	+2.6
3,244,908	-		Echvi_2725	0.47	-2.2
3,244,911	+		Echvi_2725	0.48	+0.3
3,244,912	-		Echvi_2725	0.48	+0.5
3,244,982	+		Echvi_2725	0.55	+0.3
3,244,983	-		Echvi_2725	0.55	+1.6
3,244,985	-		Echvi_2725	0.55	-0.4
3,245,061	-		Echvi_2725	0.63	+0.0
3,245,141	+		Echvi_2725	0.71	+0.7
3,245,142	-		Echvi_2725	0.71	-0.6
3,245,221	+		Echvi_2725	0.79	+0.9
3,245,222	-		Echvi_2725	0.79	-2.9
3,245,222	-		Echvi_2725	0.79	-0.1
3,245,222	-		Echvi_2725	0.79	-1.5
3,245,222	-		Echvi_2725	0.79	-0.1
3,245,226	-		Echvi_2725	0.80	+0.4
3,245,252	-		Echvi_2725	0.82	+0.9
3,245,253	+		Echvi_2725	0.82	+0.4
3,245,253	+		Echvi_2725	0.82	+0.9
3,245,253	+		Echvi_2725	0.82	-0.3
3,245,253	+		Echvi_2725	0.82	+1.1
3,245,253	+		Echvi_2725	0.82	-1.9
3,245,253	+		Echvi_2725	0.82	+0.4
3,245,253	+		Echvi_2725	0.82	-1.7
3,245,253	+		Echvi_2725	0.82	-0.8
3,245,254	-		Echvi_2725	0.83	-0.0
3,245,254	-		Echvi_2725	0.83	-1.8
3,245,254	-		Echvi_2725	0.83	+0.2
3,245,254	-		Echvi_2725	0.83	-1.3
3,245,262	-		Echvi_2725	0.83	-0.3
3,245,277	-		Echvi_2725	0.85	-0.9
3,245,287	-		Echvi_2725	0.86	+0.5
3,245,287	-		Echvi_2725	0.86	+0.1
3,245,317	+		Echvi_2725	0.89	-2.2
3,245,345	+				-0.1
3,245,346	-				-1.6
3,245,465	-				+0.4
3,245,470	-				+1.3
3,245,470	-				-1.7
3,245,474	-				-0.4
3,245,507	+				+1.0
3,245,508	-				+2.2
3,245,508	-				+1.1
3,245,552	+				+0.6
3,245,552	+				-0.4
3,245,631	+				+1.1
3,245,632	-				-0.8
3,245,699	-		Echvi_2726	0.13	+0.3
3,245,898	+		Echvi_2726	0.27	+0.9
3,245,899	-		Echvi_2726	0.27	+0.7
3,245,964	+		Echvi_2726	0.31	+1.4
3,246,054	-		Echvi_2726	0.37	-0.4
3,246,054	-		Echvi_2726	0.37	+3.3
3,246,085	+		Echvi_2726	0.40	+0.9
3,246,086	-		Echvi_2726	0.40	+0.5
3,246,153	-		Echvi_2726	0.44	+1.9
3,246,176	-		Echvi_2726	0.46	+0.6
3,246,176	-		Echvi_2726	0.46	-0.1
3,246,176	-		Echvi_2726	0.46	-0.9
3,246,177	+		Echvi_2726	0.46	-0.4
3,246,177	+		Echvi_2726	0.46	-0.7
3,246,178	-		Echvi_2726	0.46	-0.7
3,246,224	-		Echvi_2726	0.49	+0.6
3,246,308	+		Echvi_2726	0.55	-0.4
3,246,374	-		Echvi_2726	0.59	-0.6
3,246,374	-		Echvi_2726	0.59	-0.1
3,246,442	+		Echvi_2726	0.64	+1.5
3,246,443	-		Echvi_2726	0.64	-0.4
3,246,449	+		Echvi_2726	0.64	-0.1
3,246,450	-		Echvi_2726	0.64	+0.3
3,246,502	+		Echvi_2726	0.68	+0.5
3,246,502	+		Echvi_2726	0.68	+0.3
3,246,503	-		Echvi_2726	0.68	+1.5
3,246,509	+		Echvi_2726	0.68	-1.4
3,246,510	-		Echvi_2726	0.68	+0.7
3,246,543	+		Echvi_2726	0.71	+0.3
3,246,543	+		Echvi_2726	0.71	-1.5
3,246,553	+		Echvi_2726	0.71	+0.9
3,246,658	+		Echvi_2726	0.78	+0.5
3,246,686	-		Echvi_2726	0.80	+1.6
3,246,686	-		Echvi_2726	0.80	+0.0
3,246,712	-		Echvi_2726	0.82	-0.7
3,246,712	-		Echvi_2726	0.82	+1.2
3,246,720	+		Echvi_2726	0.82	+1.1
3,246,802	+		Echvi_2726	0.88	-1.8
3,246,802	+		Echvi_2726	0.88	-0.8
3,246,860	-				+1.0
3,246,862	-				+0.8
3,247,036	+				+1.1
3,247,040	-				-2.0
3,247,077	+				+0.3
3,247,103	+				-1.1
3,247,104	-				-1.2
3,247,149	-				-0.4
3,247,190	-				+1.1
3,247,299	-				-1.0
3,247,299	-				+0.1
3,247,342	+				-0.3
3,247,352	+				-0.0
3,247,394	+		Echvi_2727	0.10	+0.4
3,247,401	+		Echvi_2727	0.11	+0.1
3,247,402	-		Echvi_2727	0.11	+1.4
3,247,446	+		Echvi_2727	0.12	-1.8
3,247,447	-		Echvi_2727	0.12	+0.1
3,247,447	-		Echvi_2727	0.12	+2.5
3,247,447	-		Echvi_2727	0.12	-0.5
3,247,449	+		Echvi_2727	0.13	-0.1
3,247,450	-		Echvi_2727	0.13	+0.1
3,247,450	-		Echvi_2727	0.13	-0.8
3,247,451	+		Echvi_2727	0.13	-0.9
3,247,451	+		Echvi_2727	0.13	-0.9
3,247,451	+		Echvi_2727	0.13	-0.4
3,247,576	+		Echvi_2727	0.18	-0.7
3,247,576	+		Echvi_2727	0.18	+0.2
3,247,577	-		Echvi_2727	0.18	+0.3
3,247,619	-		Echvi_2727	0.19	-0.8
3,247,653	-		Echvi_2727	0.21	+1.2
3,247,653	-		Echvi_2727	0.21	-0.2
3,247,656	-		Echvi_2727	0.21	+0.1
3,247,686	+		Echvi_2727	0.22	-0.9
3,247,686	+		Echvi_2727	0.22	-1.1
3,247,687	-		Echvi_2727	0.22	+0.4
3,247,687	-		Echvi_2727	0.22	+0.9
3,247,688	+		Echvi_2727	0.22	-2.6
3,247,688	+		Echvi_2727	0.22	-0.6
3,247,688	+		Echvi_2727	0.22	+0.4
3,247,688	+		Echvi_2727	0.22	-0.3
3,247,689	-		Echvi_2727	0.22	+0.3
3,247,716	-		Echvi_2727	0.23	+0.9
3,247,716	-		Echvi_2727	0.23	+0.0
3,247,716	-		Echvi_2727	0.23	+0.8
3,247,716	-		Echvi_2727	0.23	+1.3
3,247,719	+		Echvi_2727	0.23	-0.6
3,247,720	-		Echvi_2727	0.24	+1.2
3,247,720	-		Echvi_2727	0.24	-0.3
3,247,780	+		Echvi_2727	0.26	-1.8
3,247,780	+		Echvi_2727	0.26	-1.1
3,247,780	+		Echvi_2727	0.26	-0.4
3,247,781	-		Echvi_2727	0.26	+0.2
3,247,781	-		Echvi_2727	0.26	+0.3
3,247,781	-		Echvi_2727	0.26	-0.6
3,247,781	-		Echvi_2727	0.26	+0.3
3,247,784	+		Echvi_2727	0.26	-1.3
3,247,784	+		Echvi_2727	0.26	+0.6
3,247,785	-		Echvi_2727	0.26	-2.6
3,247,785	-		Echvi_2727	0.26	-1.1
3,247,793	+		Echvi_2727	0.26	-1.4
3,247,838	-		Echvi_2727	0.28	+0.5
3,247,838	-		Echvi_2727	0.28	+0.5
3,247,844	-		Echvi_2727	0.29	-0.0
3,247,844	-		Echvi_2727	0.29	+0.2
3,247,844	-		Echvi_2727	0.29	-2.1
3,247,911	+		Echvi_2727	0.31	-0.2
3,247,912	-		Echvi_2727	0.31	-0.1
3,247,946	-		Echvi_2727	0.33	+0.1
3,247,946	-		Echvi_2727	0.33	-0.8
3,247,946	-		Echvi_2727	0.33	-0.3
3,247,952	+		Echvi_2727	0.33	-0.1
3,247,967	-		Echvi_2727	0.34	+0.2