Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2717

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
3,226,201	-		Echvi_2715	0.69	+0.2
3,226,201	-		Echvi_2715	0.69	+1.0
3,226,231	+		Echvi_2715	0.79	+0.5
3,226,247	-		Echvi_2715	0.85	-0.7
3,226,247	-		Echvi_2715	0.85	+0.3
3,226,248	+		Echvi_2715	0.85	-1.4
3,226,249	-		Echvi_2715	0.85	+1.7
3,226,270	+				+0.3
3,226,273	-				+0.5
3,226,289	+				-0.2
3,226,292	+				+0.3
3,226,292	+				+0.7
3,226,293	-				-0.0
3,226,298	-				-1.9
3,226,303	+				+0.1
3,226,303	+				-0.1
3,226,398	+		Echvi_2716	0.21	+0.1
3,226,399	-		Echvi_2716	0.22	-0.1
3,226,399	-		Echvi_2716	0.22	-1.6
3,226,400	+		Echvi_2716	0.22	+0.4
3,226,401	-		Echvi_2716	0.23	-0.7
3,226,505	-		Echvi_2716	0.68	-0.5
3,226,505	-		Echvi_2716	0.68	-1.3
3,226,511	-		Echvi_2716	0.70	-1.3
3,226,512	+		Echvi_2716	0.71	+0.5
3,226,513	-		Echvi_2716	0.71	+0.8
3,226,522	+		Echvi_2716	0.75	-0.2
3,226,525	+		Echvi_2716	0.76	-0.3
3,226,528	+		Echvi_2716	0.77	+0.9
3,226,528	+		Echvi_2716	0.77	+0.1
3,226,528	+		Echvi_2716	0.77	-1.1
3,226,637	+				-0.9
3,226,638	-				-0.3
3,226,641	-				+0.5
3,226,671	-				-0.3
3,226,694	+				+1.9
3,226,721	+				+0.3
3,226,722	-				-0.4
3,226,743	+				-0.9
3,226,760	+				-0.5
3,226,760	+				-0.8
3,226,760	+				-3.1
3,226,760	+				-0.3
3,226,760	+				-1.3
3,226,761	-				+0.2
3,226,761	-				+0.6
3,226,761	-				+0.3
3,226,762	+				-1.8
3,226,762	+				-0.9
3,226,763	-				+0.2
3,226,763	-				+0.1
3,226,769	+				+0.9
3,226,769	+				-2.4
3,226,769	+				-0.9
3,226,769	+				-0.7
3,226,769	+				-0.0
3,226,771	+				-0.0
3,226,771	+				+0.7
3,226,771	+				+0.3
3,226,771	+				-0.4
3,226,771	+				-0.3
3,226,771	+				-0.2
3,226,771	+				-0.9
3,226,771	+				-0.7
3,226,772	-				+0.3
3,226,772	-				-0.7
3,226,772	-				+0.1
3,226,772	-				-0.5
3,226,772	-				-0.6
3,226,773	+				-0.1
3,226,774	-				-0.9
3,226,774	-				+0.3
3,226,774	-				+1.6
3,226,774	-				-1.0
3,226,780	+				+0.6
3,226,781	-				+0.2
3,226,781	-				-0.6
3,226,787	-				+0.5
3,226,792	-				-0.6
3,226,811	+				-0.7
3,226,812	-				+0.0
3,226,834	+				+0.4
3,226,835	-				+0.2
3,226,851	+				+0.1
3,226,870	+				+0.7
3,226,871	-				+1.1
3,226,889	-				+0.1
3,226,903	+				-0.8
3,226,974	-				-0.0
3,227,142	+				-1.6
3,227,142	+				-0.1
3,227,142	+				+1.9
3,227,160	+				-0.2
3,227,234	+				+0.8
3,227,345	-				-1.0
3,227,378	-				-0.1
3,227,415	-		Echvi_2717	0.11	+0.2
3,227,418	+		Echvi_2717	0.11	+1.1
3,227,418	+		Echvi_2717	0.11	+0.4
3,227,419	-		Echvi_2717	0.11	+0.8
3,227,419	-		Echvi_2717	0.11	-0.9
3,227,419	-		Echvi_2717	0.11	+1.1
3,227,517	+		Echvi_2717	0.16	-0.3
3,227,517	+		Echvi_2717	0.16	-2.3
3,227,518	-		Echvi_2717	0.16	+1.3
3,227,518	-		Echvi_2717	0.16	-0.2
3,227,518	-		Echvi_2717	0.16	+0.8
3,227,518	-		Echvi_2717	0.16	+0.8
3,227,591	+		Echvi_2717	0.19	-1.8
3,227,592	-		Echvi_2717	0.19	-0.7
3,227,634	+		Echvi_2717	0.21	-0.1
3,227,634	+		Echvi_2717	0.21	-1.4
3,227,634	+		Echvi_2717	0.21	-0.9
3,227,647	+		Echvi_2717	0.22	+0.6
3,227,648	-		Echvi_2717	0.22	-0.0
3,227,648	-		Echvi_2717	0.22	+0.9
3,227,709	+		Echvi_2717	0.25	+0.1
3,227,710	-		Echvi_2717	0.25	-0.0
3,227,712	+		Echvi_2717	0.25	+0.3
3,227,712	+		Echvi_2717	0.25	-0.7
3,227,732	+		Echvi_2717	0.26	-0.1
3,227,733	-		Echvi_2717	0.26	+0.7
3,227,758	-		Echvi_2717	0.27	+0.4
3,227,763	-		Echvi_2717	0.27	-0.7
3,227,790	-		Echvi_2717	0.29	+2.0
3,227,854	-		Echvi_2717	0.32	+1.1
3,227,862	+		Echvi_2717	0.32	+1.6
3,227,863	-		Echvi_2717	0.32	+0.3
3,227,863	-		Echvi_2717	0.32	-0.7
3,227,865	-		Echvi_2717	0.32	+0.7
3,227,865	-		Echvi_2717	0.32	-0.6
3,227,865	-		Echvi_2717	0.32	-0.2
3,227,867	+		Echvi_2717	0.32	+0.3
3,227,867	+		Echvi_2717	0.32	-2.0
3,227,868	-		Echvi_2717	0.32	+1.3
3,227,988	+		Echvi_2717	0.38	-0.4
3,228,025	+		Echvi_2717	0.40	-0.8
3,228,026	-		Echvi_2717	0.40	+0.4
3,228,026	-		Echvi_2717	0.40	+0.4
3,228,112	-		Echvi_2717	0.44	+1.1
3,228,112	-		Echvi_2717	0.44	+1.4
3,228,112	-		Echvi_2717	0.44	-0.6
3,228,112	-		Echvi_2717	0.44	+0.4
3,228,116	+		Echvi_2717	0.44	-0.5
3,228,133	+		Echvi_2717	0.45	-0.4
3,228,133	+		Echvi_2717	0.45	+0.2
3,228,133	+		Echvi_2717	0.45	+0.5
3,228,306	-		Echvi_2717	0.53	-1.2
3,228,306	-		Echvi_2717	0.53	-0.2
3,228,306	-		Echvi_2717	0.53	+2.7
3,228,306	-		Echvi_2717	0.53	+0.6
3,228,306	-		Echvi_2717	0.53	-0.3
3,228,306	-		Echvi_2717	0.53	+0.6
3,228,312	+		Echvi_2717	0.53	+0.2
3,228,313	-		Echvi_2717	0.53	-0.9
3,228,339	+		Echvi_2717	0.55	-0.2
3,228,339	+		Echvi_2717	0.55	-2.1
3,228,339	+		Echvi_2717	0.55	-0.4
3,228,340	-		Echvi_2717	0.55	-0.1
3,228,342	-		Echvi_2717	0.55	+2.1
3,228,388	-		Echvi_2717	0.57	+1.3
3,228,553	-		Echvi_2717	0.65	+1.0
3,228,588	+		Echvi_2717	0.66	+1.1
3,228,588	+		Echvi_2717	0.66	-0.6
3,228,588	+		Echvi_2717	0.66	-1.1
3,228,588	+		Echvi_2717	0.66	+0.4
3,228,589	-		Echvi_2717	0.66	+0.1
3,228,589	-		Echvi_2717	0.66	-0.0
3,228,589	-		Echvi_2717	0.66	-0.3
3,228,589	-		Echvi_2717	0.66	+1.4
3,228,589	-		Echvi_2717	0.66	+0.8
3,228,589	-		Echvi_2717	0.66	+1.0
3,228,605	-		Echvi_2717	0.67	+0.5
3,228,764	+		Echvi_2717	0.75	+0.4
3,228,848	-		Echvi_2717	0.79	-0.2
3,228,854	-		Echvi_2717	0.79	-0.2
3,228,866	+		Echvi_2717	0.79	-1.8
3,228,866	+		Echvi_2717	0.79	-0.4
3,228,866	+		Echvi_2717	0.79	-0.1
3,228,866	+		Echvi_2717	0.79	+2.4
3,228,867	-		Echvi_2717	0.79	-0.1
3,228,867	-		Echvi_2717	0.79	-0.0
3,228,867	-		Echvi_2717	0.79	+1.4
3,228,921	+		Echvi_2717	0.82	-0.9
3,228,922	-		Echvi_2717	0.82	-1.1
3,228,992	-		Echvi_2717	0.85	-0.4
3,229,015	-		Echvi_2717	0.86	-0.1
3,229,072	+		Echvi_2717	0.89	-0.4
3,229,073	-		Echvi_2717	0.89	+0.9
3,229,073	-		Echvi_2717	0.89	+1.5
3,229,118	-				+0.3
3,229,222	+				-0.9
3,229,246	-				+0.1
3,229,285	-				-0.4
3,229,285	-				-0.6
3,229,286	+				-0.4
3,229,287	-				-0.7
3,229,287	-				-1.1
3,229,287	-				-0.8
3,229,317	-				-1.2
3,229,330	+				-0.8
3,229,392	+				+1.6
3,229,396	+				+1.3
3,229,397	-				+0.1
3,229,397	-				-0.1
3,229,454	-				-0.4
3,229,495	+				+1.1
3,229,495	+				-2.6
3,229,496	-				-0.5
3,229,500	-				+1.2
3,229,511	+				-1.3
3,229,540	+				-0.3
3,229,541	-				-0.2
3,229,651	+				-0.8
3,229,652	-				-0.7
3,229,652	-				+0.1
3,229,652	-				-1.4
3,229,652	-				-0.3
3,229,844	+		Echvi_2718	0.14	+0.2
3,229,862	-		Echvi_2718	0.15	-0.2
3,229,915	-		Echvi_2718	0.17	+0.7
3,229,929	+		Echvi_2718	0.18	-0.8
3,229,929	+		Echvi_2718	0.18	-0.8
3,229,929	+		Echvi_2718	0.18	-0.9
3,229,929	+		Echvi_2718	0.18	+0.1
3,229,930	-		Echvi_2718	0.18	+0.6
3,229,931	+		Echvi_2718	0.18	-0.4
3,229,931	+		Echvi_2718	0.18	-0.7
3,229,932	-		Echvi_2718	0.18	+0.0
3,229,932	-		Echvi_2718	0.18	-0.5
3,229,980	-		Echvi_2718	0.20	+1.7
3,229,988	+		Echvi_2718	0.21	+0.1
3,229,992	-		Echvi_2718	0.21	+0.6
3,230,004	-		Echvi_2718	0.21	-0.7
3,230,012	+		Echvi_2718	0.22	+0.9
3,230,013	-		Echvi_2718	0.22	+0.7
3,230,106	+		Echvi_2718	0.26	+1.7
3,230,106	+		Echvi_2718	0.26	-0.6
3,230,192	+		Echvi_2718	0.30	-1.1
3,230,210	+		Echvi_2718	0.30	+1.7
3,230,210	+		Echvi_2718	0.30	+0.1
3,230,211	-		Echvi_2718	0.30	+0.0
3,230,246	+		Echvi_2718	0.32	+0.3
3,230,247	-		Echvi_2718	0.32	+1.1
3,230,247	-		Echvi_2718	0.32	-0.8
3,230,247	-		Echvi_2718	0.32	-2.2
3,230,250	+		Echvi_2718	0.32	-0.8