Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2713

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
3,224,125	+		Echvi_2711	0.29	-1.2
3,224,155	+		Echvi_2711	0.37	+0.2
3,224,156	-		Echvi_2711	0.37	+1.2
3,224,191	+		Echvi_2711	0.46	+0.5
3,224,192	-		Echvi_2711	0.46	-0.9
3,224,198	-		Echvi_2711	0.47	-0.6
3,224,210	-		Echvi_2711	0.50	+2.6
3,224,241	+		Echvi_2711	0.58	-0.3
3,224,245	+		Echvi_2711	0.59	+0.3
3,224,245	+		Echvi_2711	0.59	-0.2
3,224,246	-		Echvi_2711	0.59	-2.5
3,224,279	-		Echvi_2711	0.68	+0.3
3,224,288	+		Echvi_2711	0.70	+1.3
3,224,288	+		Echvi_2711	0.70	+1.5
3,224,288	+		Echvi_2711	0.70	+0.8
3,224,288	+		Echvi_2711	0.70	+1.2
3,224,288	+		Echvi_2711	0.70	+0.7
3,224,289	-		Echvi_2711	0.70	+0.1
3,224,289	-		Echvi_2711	0.70	+0.6
3,224,290	+		Echvi_2711	0.70	-0.1
3,224,328	+		Echvi_2711	0.80	-0.6
3,224,328	+		Echvi_2711	0.80	+0.1
3,224,329	-		Echvi_2711	0.80	+0.4
3,224,329	-		Echvi_2711	0.80	+0.9
3,224,329	-		Echvi_2711	0.80	-1.3
3,224,332	+		Echvi_2711	0.81	+1.2
3,224,332	+		Echvi_2711	0.81	-0.6
3,224,332	+		Echvi_2711	0.81	-0.1
3,224,332	+		Echvi_2711	0.81	-0.7
3,224,333	-		Echvi_2711	0.81	-0.1
3,224,333	-		Echvi_2711	0.81	-0.1
3,224,406	-				-0.1
3,224,428	+				-0.8
3,224,485	+				-0.2
3,224,486	-				+3.9
3,224,513	+				-0.9
3,224,554	-				-1.6
3,224,605	+				-1.0
3,224,686	+				+0.6
3,224,686	+				-2.3
3,224,698	+				-0.0
3,224,699	-				+1.6
3,224,701	+				+0.7
3,224,701	+				+0.4
3,224,702	-				+0.3
3,224,702	-				-1.2
3,224,713	+				-1.0
3,224,713	+				-0.7
3,224,714	-				-0.6
3,224,714	-				+0.4
3,224,725	+				+1.0
3,224,725	+				-0.7
3,224,726	-				+1.3
3,224,726	-				+0.4
3,224,728	+				+1.4
3,224,728	+				-2.8
3,224,729	-				+2.9
3,224,729	-				+0.4
3,224,729	-				+0.9
3,224,732	+				+2.5
3,224,733	-				-0.6
3,224,733	-				+0.3
3,224,733	-				+0.7
3,224,733	-				+1.3
3,224,776	+		Echvi_2712	0.21	+0.0
3,224,828	-		Echvi_2712	0.36	+0.2
3,224,840	+		Echvi_2712	0.40	+2.0
3,224,882	+		Echvi_2712	0.52	+0.9
3,224,882	+		Echvi_2712	0.52	-1.4
3,224,883	-		Echvi_2712	0.53	+1.0
3,224,883	-		Echvi_2712	0.53	+1.3
3,224,883	-		Echvi_2712	0.53	+0.4
3,224,883	-		Echvi_2712	0.53	+0.1
3,224,884	+		Echvi_2712	0.53	-0.7
3,224,884	+		Echvi_2712	0.53	+0.7
3,224,884	+		Echvi_2712	0.53	+0.8
3,224,885	-		Echvi_2712	0.53	+1.3
3,224,885	-		Echvi_2712	0.53	+0.4
3,224,885	-		Echvi_2712	0.53	+0.0
3,224,885	-		Echvi_2712	0.53	-1.1
3,224,886	+		Echvi_2712	0.54	-0.0
3,224,886	+		Echvi_2712	0.54	-1.3
3,224,886	+		Echvi_2712	0.54	-0.7
3,224,886	+		Echvi_2712	0.54	+0.3
3,224,886	+		Echvi_2712	0.54	-0.1
3,224,886	+		Echvi_2712	0.54	+0.6
3,224,887	-		Echvi_2712	0.54	-0.6
3,224,887	-		Echvi_2712	0.54	-0.8
3,224,887	-		Echvi_2712	0.54	+1.5
3,224,887	-		Echvi_2712	0.54	-2.1
3,224,887	-		Echvi_2712	0.54	-0.8
3,224,911	-		Echvi_2712	0.61	+0.3
3,224,911	-		Echvi_2712	0.61	+0.4
3,224,930	+		Echvi_2712	0.67	-0.4
3,224,931	-		Echvi_2712	0.67	-3.4
3,224,959	+		Echvi_2712	0.75	+0.8
3,224,959	+		Echvi_2712	0.75	+1.9
3,224,960	-		Echvi_2712	0.76	-1.0
3,224,960	-		Echvi_2712	0.76	-1.9
3,224,960	-		Echvi_2712	0.76	+1.6
3,224,971	+		Echvi_2712	0.79	-2.1
3,224,971	+		Echvi_2712	0.79	+0.4
3,225,023	+				+1.9
3,225,035	+				-1.3
3,225,036	-				-2.4
3,225,039	+				+1.6
3,225,039	+				+0.5
3,225,039	+				-0.4
3,225,068	+				-2.5
3,225,090	+				+1.0
3,225,091	-				+2.9
3,225,258	-		Echvi_2713	0.55	-1.1
3,225,302	+		Echvi_2713	0.72	-0.9
3,225,302	+		Echvi_2713	0.72	-0.6
3,225,303	-		Echvi_2713	0.73	-1.1
3,225,323	-		Echvi_2713	0.81	-0.2
3,225,330	-		Echvi_2713	0.83	-0.9
3,225,338	+		Echvi_2713	0.87	-0.3
3,225,339	-		Echvi_2713	0.87	-1.7
3,225,339	-		Echvi_2713	0.87	-0.5
3,225,399	+				+1.3
3,225,400	-				+0.7
3,225,401	+				-1.4
3,225,418	-		Echvi_2714	0.13	+0.8
3,225,418	-		Echvi_2714	0.13	+0.3
3,225,433	+		Echvi_2714	0.17	+1.6
3,225,434	-		Echvi_2714	0.17	+0.6
3,225,436	+		Echvi_2714	0.17	-0.6
3,225,436	+		Echvi_2714	0.17	+0.5
3,225,437	-		Echvi_2714	0.18	-0.8
3,225,437	-		Echvi_2714	0.18	-1.3
3,225,437	-		Echvi_2714	0.18	-0.6
3,225,438	+		Echvi_2714	0.18	-0.2
3,225,438	+		Echvi_2714	0.18	-1.1
3,225,439	-		Echvi_2714	0.18	-0.2
3,225,439	-		Echvi_2714	0.18	+0.2
3,225,439	-		Echvi_2714	0.18	+2.5
3,225,458	-		Echvi_2714	0.23	+0.1
3,225,458	-		Echvi_2714	0.23	-0.0
3,225,460	-		Echvi_2714	0.23	-0.4
3,225,460	-		Echvi_2714	0.23	+0.1
3,225,462	+		Echvi_2714	0.24	-0.5
3,225,462	+		Echvi_2714	0.24	+0.0
3,225,463	-		Echvi_2714	0.24	-0.2
3,225,474	-		Echvi_2714	0.26	+0.3
3,225,526	+		Echvi_2714	0.39	-0.2
3,225,572	-		Echvi_2714	0.50	+3.8
3,225,596	-		Echvi_2714	0.56	+0.2
3,225,669	-		Echvi_2714	0.73	-0.1
3,225,757	+				+0.9
3,225,786	+				+1.2
3,225,787	-				-0.8
3,225,789	+				-0.4
3,225,789	+				+0.6
3,225,790	-				-0.0
3,225,790	-				-0.1
3,225,790	-				-2.5
3,225,791	+				+1.9
3,225,791	+				-0.4
3,225,842	+				+2.9
3,225,842	+				-0.5
3,225,842	+				+1.1
3,225,843	-				+0.9
3,225,843	-				-0.6
3,225,844	+				-0.4
3,225,845	-				+0.9
3,225,845	-				+0.1
3,225,845	-				+0.0
3,225,845	-				-0.9
3,225,867	+				+1.3
3,225,913	-				-0.5
3,225,955	-				+1.1
3,225,955	-				-0.9
3,225,961	-				+2.1
3,225,977	-				+1.2
3,225,977	-				+0.7
3,225,981	+				-0.1
3,225,984	+				+0.6
3,225,991	-				+0.7
3,225,994	+				+1.2
3,226,087	-		Echvi_2715	0.30	-0.3
3,226,107	+		Echvi_2715	0.37	+1.0
3,226,201	-		Echvi_2715	0.69	+0.2
3,226,201	-		Echvi_2715	0.69	+1.0
3,226,231	+		Echvi_2715	0.79	+0.5
3,226,247	-		Echvi_2715	0.85	-0.7
3,226,247	-		Echvi_2715	0.85	+0.3
3,226,248	+		Echvi_2715	0.85	-1.4
3,226,249	-		Echvi_2715	0.85	+1.7
3,226,270	+				+0.3
3,226,273	-				+0.5
3,226,289	+				-0.2
3,226,292	+				+0.3
3,226,292	+				+0.7
3,226,293	-				-0.0
3,226,298	-				-1.9
3,226,303	+				+0.1
3,226,303	+				-0.1