Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2692

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
3,197,539	-				+0.1
3,197,541	+				-0.3
3,197,561	-		Echvi_2691	0.12	-0.4
3,197,572	-		Echvi_2691	0.13	-0.6
3,197,572	-		Echvi_2691	0.13	+2.0
3,197,574	+		Echvi_2691	0.13	+0.2
3,197,575	-		Echvi_2691	0.13	+1.9
3,197,575	-		Echvi_2691	0.13	+0.1
3,197,578	-		Echvi_2691	0.13	-0.4
3,197,578	-		Echvi_2691	0.13	+0.1
3,197,579	+		Echvi_2691	0.13	-0.3
3,197,579	+		Echvi_2691	0.13	-0.9
3,197,580	-		Echvi_2691	0.13	+0.9
3,197,580	-		Echvi_2691	0.13	+0.2
3,197,600	+		Echvi_2691	0.15	-0.8
3,197,601	-		Echvi_2691	0.15	-0.3
3,197,648	-		Echvi_2691	0.20	+1.1
3,197,751	-		Echvi_2691	0.30	+0.6
3,197,785	-		Echvi_2691	0.33	+1.2
3,197,841	+		Echvi_2691	0.38	+0.1
3,197,841	+		Echvi_2691	0.38	+0.6
3,197,856	+		Echvi_2691	0.39	+0.8
3,197,924	+		Echvi_2691	0.46	+0.9
3,197,925	-		Echvi_2691	0.46	+1.1
3,197,977	-		Echvi_2691	0.51	+0.1
3,197,980	-		Echvi_2691	0.51	+0.0
3,197,980	-		Echvi_2691	0.51	-0.3
3,197,983	+		Echvi_2691	0.51	-0.7
3,197,984	-		Echvi_2691	0.52	-0.9
3,198,047	+		Echvi_2691	0.57	+1.6
3,198,047	+		Echvi_2691	0.57	+1.1
3,198,048	-		Echvi_2691	0.58	-0.7
3,198,048	-		Echvi_2691	0.58	-0.1
3,198,048	-		Echvi_2691	0.58	+0.1
3,198,048	-		Echvi_2691	0.58	-0.6
3,198,052	+		Echvi_2691	0.58	+0.5
3,198,052	+		Echvi_2691	0.58	+1.9
3,198,052	+		Echvi_2691	0.58	+0.7
3,198,053	-		Echvi_2691	0.58	-0.8
3,198,089	+		Echvi_2691	0.61	+1.2
3,198,142	+		Echvi_2691	0.66	+1.3
3,198,188	+		Echvi_2691	0.71	-1.6
3,198,189	-		Echvi_2691	0.71	+0.6
3,198,223	-		Echvi_2691	0.74	-0.9
3,198,223	-		Echvi_2691	0.74	-0.6
3,198,224	+		Echvi_2691	0.74	+1.1
3,198,230	+		Echvi_2691	0.75	+0.7
3,198,231	-		Echvi_2691	0.75	+0.6
3,198,236	-		Echvi_2691	0.75	-0.9
3,198,246	+		Echvi_2691	0.76	+1.3
3,198,247	-		Echvi_2691	0.76	+0.9
3,198,282	-		Echvi_2691	0.80	-0.4
3,198,314	+		Echvi_2691	0.83	+0.0
3,198,314	+		Echvi_2691	0.83	+1.8
3,198,314	+		Echvi_2691	0.83	+1.6
3,198,315	-		Echvi_2691	0.83	-0.1
3,198,315	-		Echvi_2691	0.83	-0.1
3,198,370	-		Echvi_2691	0.88	-0.8
3,198,419	+				+3.1
3,198,419	+				+0.6
3,198,420	-				-0.7
3,198,422	+				+2.1
3,198,422	+				+0.3
3,198,444	+				+0.7
3,198,483	-				+1.9
3,198,492	+				+0.5
3,198,509	+				+0.9
3,198,510	-				+0.1
3,198,542	+				+0.9
3,198,557	+				+0.6
3,198,557	+				+0.5
3,198,557	+				+1.3
3,198,558	-				+0.6
3,198,579	-		Echvi_2692	0.11	+0.8
3,198,623	+		Echvi_2692	0.17	+0.7
3,198,624	-		Echvi_2692	0.17	+0.3
3,198,624	-		Echvi_2692	0.17	+0.8
3,198,635	+		Echvi_2692	0.19	+0.8
3,198,640	+		Echvi_2692	0.19	+0.9
3,198,649	+		Echvi_2692	0.21	+1.4
3,198,649	+		Echvi_2692	0.21	+0.9
3,198,666	-		Echvi_2692	0.23	-0.2
3,198,666	-		Echvi_2692	0.23	+0.6
3,198,666	-		Echvi_2692	0.23	+0.3
3,198,741	-		Echvi_2692	0.33	-0.2
3,198,741	-		Echvi_2692	0.33	+0.3
3,198,747	+		Echvi_2692	0.34	+0.8
3,198,747	+		Echvi_2692	0.34	+0.1
3,198,748	-		Echvi_2692	0.34	+1.6
3,198,748	-		Echvi_2692	0.34	+1.7
3,198,748	-		Echvi_2692	0.34	-0.7
3,198,840	-		Echvi_2692	0.46	+0.0
3,198,890	-		Echvi_2692	0.53	-0.3
3,198,972	+		Echvi_2692	0.64	+2.3
3,198,984	+		Echvi_2692	0.66	+3.5
3,199,040	+		Echvi_2692	0.73	+1.0
3,199,047	-		Echvi_2692	0.74	-0.4
3,199,048	+		Echvi_2692	0.74	+1.4
3,199,098	-		Echvi_2692	0.81	+0.3
3,199,098	-		Echvi_2692	0.81	-0.7
3,199,105	-		Echvi_2692	0.82	-0.3
3,199,137	-		Echvi_2692	0.86	+0.1
3,199,236	+				+2.9
3,199,297	+				+0.6
3,199,305	+				+2.1
3,199,324	+				+2.4
3,199,325	-				-0.3
3,199,327	+				+2.6
3,199,348	+				+0.4
3,199,529	+				-1.8
3,199,530	-				+1.6
3,199,613	-		Echvi_2693	0.11	-0.4
3,199,687	+		Echvi_2693	0.14	-2.8
3,199,848	+		Echvi_2693	0.21	+0.1
3,199,888	-		Echvi_2693	0.23	-1.0
3,199,958	+		Echvi_2693	0.26	-2.1
3,199,962	+		Echvi_2693	0.26	-0.2
3,199,963	-		Echvi_2693	0.27	+0.3
3,199,963	-		Echvi_2693	0.27	-0.1
3,200,084	+		Echvi_2693	0.32	+0.1
3,200,084	+		Echvi_2693	0.32	-0.3
3,200,084	+		Echvi_2693	0.32	-1.7
3,200,084	+		Echvi_2693	0.32	-0.4
3,200,084	+		Echvi_2693	0.32	-2.8
3,200,084	+		Echvi_2693	0.32	-2.4
3,200,085	-		Echvi_2693	0.32	+0.1
3,200,085	-		Echvi_2693	0.32	-0.0
3,200,086	+		Echvi_2693	0.32	-0.6
3,200,086	+		Echvi_2693	0.32	+0.1
3,200,086	+		Echvi_2693	0.32	-0.1
3,200,086	+		Echvi_2693	0.32	-0.1
3,200,086	+		Echvi_2693	0.32	-0.1
3,200,086	+		Echvi_2693	0.32	-1.9
3,200,087	-		Echvi_2693	0.32	+0.4
3,200,087	-		Echvi_2693	0.32	+1.0
3,200,126	+		Echvi_2693	0.34	+1.9
3,200,142	+		Echvi_2693	0.34	-0.7