Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2689

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
3,194,176	-		Echvi_2688	0.43	+2.5
3,194,185	-		Echvi_2688	0.44	-0.2
3,194,203	+		Echvi_2688	0.46	+0.3
3,194,204	-		Echvi_2688	0.46	+0.8
3,194,204	-		Echvi_2688	0.46	-0.4
3,194,208	-		Echvi_2688	0.46	-0.2
3,194,208	-		Echvi_2688	0.46	+0.7
3,194,208	-		Echvi_2688	0.46	-1.4
3,194,224	+		Echvi_2688	0.47	-1.2
3,194,241	-		Echvi_2688	0.49	+0.7
3,194,241	-		Echvi_2688	0.49	-0.1
3,194,241	-		Echvi_2688	0.49	+0.0
3,194,241	-		Echvi_2688	0.49	-0.5
3,194,241	-		Echvi_2688	0.49	-0.8
3,194,241	-		Echvi_2688	0.49	-0.9
3,194,241	-		Echvi_2688	0.49	+1.5
3,194,241	-		Echvi_2688	0.49	+0.6
3,194,298	+		Echvi_2688	0.53	-0.5
3,194,320	+		Echvi_2688	0.55	+0.4
3,194,321	-		Echvi_2688	0.55	-1.4
3,194,321	-		Echvi_2688	0.55	-1.3
3,194,321	-		Echvi_2688	0.55	-0.6
3,194,323	-		Echvi_2688	0.55	+0.7
3,194,339	+		Echvi_2688	0.56	-1.8
3,194,339	+		Echvi_2688	0.56	-0.2
3,194,340	-		Echvi_2688	0.57	+0.2
3,194,385	-		Echvi_2688	0.60	-0.3
3,194,396	-		Echvi_2688	0.61	-0.2
3,194,426	+		Echvi_2688	0.64	-1.1
3,194,427	-		Echvi_2688	0.64	-2.2
3,194,478	+		Echvi_2688	0.68	-0.4
3,194,478	+		Echvi_2688	0.68	+1.0
3,194,480	+		Echvi_2688	0.68	+0.2
3,194,554	+		Echvi_2688	0.74	+0.5
3,194,555	-		Echvi_2688	0.74	+0.4
3,194,616	+		Echvi_2688	0.79	+1.3
3,194,616	+		Echvi_2688	0.79	-0.1
3,194,617	-		Echvi_2688	0.79	+2.4
3,194,617	-		Echvi_2688	0.79	+0.6
3,194,617	-		Echvi_2688	0.79	+0.4
3,194,617	-		Echvi_2688	0.79	-0.1
3,194,618	+		Echvi_2688	0.79	-1.1
3,194,619	-		Echvi_2688	0.79	-0.1
3,194,641	-		Echvi_2688	0.81	-0.5
3,194,648	+		Echvi_2688	0.81	-1.1
3,194,764	+				+1.3
3,194,765	-				-1.3
3,194,778	-				-2.0
3,194,778	-				-0.7
3,194,786	+				+0.6
3,194,799	+				-0.4
3,194,864	-				-0.3
3,194,877	+				+1.9
3,194,929	+				-0.7
3,194,930	-				-0.5
3,194,986	-				-1.1
3,194,987	+				-0.1
3,195,054	+				+0.7
3,195,054	+				-0.3
3,195,055	-				-0.9
3,195,055	-				+0.3
3,195,057	+				+1.1
3,195,057	+				+2.3
3,195,057	+				-0.7
3,195,057	+				-0.1
3,195,058	-				+1.4
3,195,058	-				+0.7
3,195,058	-				-1.1
3,195,058	-				-2.0
3,195,058	-				+1.2
3,195,058	-				-0.3
3,195,110	-				+0.3
3,195,122	+				+1.2
3,195,126	+				-0.9
3,195,144	+				-1.3
3,195,144	+				-1.9
3,195,145	-				+0.3
3,195,145	-				+0.2
3,195,145	-				-0.5
3,195,146	+				-2.0
3,195,168	+				-0.4
3,195,222	-				-1.1
3,195,256	+				-0.8
3,195,257	-				+0.4
3,195,268	+				-1.1
3,195,271	+				-0.0
3,195,279	-		Echvi_2689	0.10	+0.4
3,195,332	+		Echvi_2689	0.14	-0.8
3,195,332	+		Echvi_2689	0.14	+2.2
3,195,394	-		Echvi_2689	0.19	-0.5
3,195,425	+		Echvi_2689	0.22	+0.3
3,195,425	+		Echvi_2689	0.22	-0.1
3,195,452	+		Echvi_2689	0.24	+0.9
3,195,453	-		Echvi_2689	0.24	+0.3
3,195,453	-		Echvi_2689	0.24	+0.6
3,195,480	+		Echvi_2689	0.26	+1.4
3,195,480	+		Echvi_2689	0.26	-0.4
3,195,486	+		Echvi_2689	0.27	+0.4
3,195,487	-		Echvi_2689	0.27	+1.4
3,195,487	-		Echvi_2689	0.27	-0.2
3,195,491	+		Echvi_2689	0.27	+0.6
3,195,491	+		Echvi_2689	0.27	+0.5
3,195,492	-		Echvi_2689	0.27	+1.2
3,195,492	-		Echvi_2689	0.27	-1.2
3,195,509	+		Echvi_2689	0.28	+0.1
3,195,520	-		Echvi_2689	0.29	-0.4
3,195,520	-		Echvi_2689	0.29	+0.2
3,195,520	-		Echvi_2689	0.29	-1.2
3,195,552	-		Echvi_2689	0.32	-0.2
3,195,561	-		Echvi_2689	0.32	-0.5
3,195,623	-		Echvi_2689	0.37	+0.5
3,195,647	+		Echvi_2689	0.39	+0.1
3,195,650	-		Echvi_2689	0.39	-2.0
3,195,744	-		Echvi_2689	0.47	-0.6
3,195,758	+		Echvi_2689	0.48	+0.7
3,195,759	-		Echvi_2689	0.48	+0.1
3,195,759	-		Echvi_2689	0.48	+0.2
3,195,782	-		Echvi_2689	0.50	-0.5
3,195,805	-		Echvi_2689	0.51	-0.6
3,195,805	-		Echvi_2689	0.51	+1.4
3,195,899	+		Echvi_2689	0.59	+1.7
3,195,899	+		Echvi_2689	0.59	-0.4
3,195,899	+		Echvi_2689	0.59	+0.8
3,195,900	-		Echvi_2689	0.59	+0.4
3,195,900	-		Echvi_2689	0.59	+0.3
3,195,900	-		Echvi_2689	0.59	-1.9
3,195,900	-		Echvi_2689	0.59	-0.2
3,195,901	+		Echvi_2689	0.59	-1.4
3,195,901	+		Echvi_2689	0.59	+1.8
3,195,902	-		Echvi_2689	0.59	-0.1
3,195,902	-		Echvi_2689	0.59	+0.1
3,195,902	-		Echvi_2689	0.59	-0.3
3,195,902	-		Echvi_2689	0.59	-0.9
3,195,945	+		Echvi_2689	0.62	+1.0
3,195,945	+		Echvi_2689	0.62	+1.0
3,195,949	+		Echvi_2689	0.63	+1.6
3,195,949	+		Echvi_2689	0.63	+1.0
3,195,950	-		Echvi_2689	0.63	+0.5
3,195,950	-		Echvi_2689	0.63	-0.3
3,196,016	+		Echvi_2689	0.68	+0.0
3,196,017	-		Echvi_2689	0.68	+0.3
3,196,018	+		Echvi_2689	0.68	+1.6
3,196,019	-		Echvi_2689	0.68	-0.1
3,196,062	+		Echvi_2689	0.72	+0.0
3,196,062	+		Echvi_2689	0.72	+0.7
3,196,062	+		Echvi_2689	0.72	+0.2
3,196,062	+		Echvi_2689	0.72	+0.1
3,196,063	-		Echvi_2689	0.72	+0.4
3,196,063	-		Echvi_2689	0.72	-0.4
3,196,065	+		Echvi_2689	0.72	+1.6
3,196,065	+		Echvi_2689	0.72	+0.7
3,196,065	+		Echvi_2689	0.72	+0.4
3,196,066	-		Echvi_2689	0.72	+0.3
3,196,066	-		Echvi_2689	0.72	-0.0
3,196,068	-		Echvi_2689	0.72	-2.3
3,196,068	-		Echvi_2689	0.72	+0.9
3,196,074	-		Echvi_2689	0.73	+1.7
3,196,084	+		Echvi_2689	0.73	-0.4
3,196,085	-		Echvi_2689	0.73	+0.8
3,196,106	+		Echvi_2689	0.75	+1.7
3,196,107	-		Echvi_2689	0.75	-1.5
3,196,107	-		Echvi_2689	0.75	+0.4
3,196,189	+		Echvi_2689	0.82	+2.5
3,196,189	+		Echvi_2689	0.82	+0.1
3,196,190	-		Echvi_2689	0.82	-0.3
3,196,190	-		Echvi_2689	0.82	+0.1
3,196,190	-		Echvi_2689	0.82	-0.5
3,196,190	-		Echvi_2689	0.82	-0.5
3,196,273	-		Echvi_2689	0.88	-0.3
3,196,407	+				+0.5
3,196,407	+				+0.8
3,196,407	+				+2.3
3,196,408	-				+1.5
3,196,411	+				+2.5
3,196,412	-				-0.4
3,196,423	-				-1.8
3,196,423	-				-0.5
3,196,423	-				+0.2
3,196,448	-				-0.7
3,196,465	+				+0.9
3,196,466	-				+1.9
3,196,469	-				+0.3
3,196,477	+				+0.8
3,196,484	+				-2.3
3,196,595	+		Echvi_2690	0.17	-0.5
3,196,596	-		Echvi_2690	0.17	-0.9
3,196,602	+		Echvi_2690	0.17	+0.8
3,196,602	+		Echvi_2690	0.17	+1.2
3,196,602	+		Echvi_2690	0.17	-0.4
3,196,603	-		Echvi_2690	0.17	+0.1
3,196,603	-		Echvi_2690	0.17	+0.3
3,196,603	-		Echvi_2690	0.17	-0.4
3,196,604	+		Echvi_2690	0.17	+0.6
3,196,604	+		Echvi_2690	0.17	-0.2
3,196,604	+		Echvi_2690	0.17	+2.2
3,196,617	+		Echvi_2690	0.19	+1.2
3,196,619	+		Echvi_2690	0.19	-0.0
3,196,620	-		Echvi_2690	0.19	+0.6
3,196,633	-		Echvi_2690	0.20	+1.9
3,196,633	-		Echvi_2690	0.20	+0.4
3,196,636	+		Echvi_2690	0.21	+0.6
3,196,636	+		Echvi_2690	0.21	+1.9
3,196,654	-		Echvi_2690	0.23	+1.9
3,196,655	+		Echvi_2690	0.23	-0.1
3,196,655	+		Echvi_2690	0.23	-1.9
3,196,655	+		Echvi_2690	0.23	+0.3
3,196,656	-		Echvi_2690	0.23	-1.5
3,196,731	-		Echvi_2690	0.30	+1.3
3,196,747	-		Echvi_2690	0.32	+3.7
3,196,747	-		Echvi_2690	0.32	-0.2
3,196,747	-		Echvi_2690	0.32	+0.3
3,196,750	+		Echvi_2690	0.32	+1.0
3,196,750	+		Echvi_2690	0.32	+0.9
3,196,750	+		Echvi_2690	0.32	+0.5
3,196,751	-		Echvi_2690	0.32	-0.9
3,196,751	-		Echvi_2690	0.32	-0.4
3,196,854	+		Echvi_2690	0.43	+0.8
3,196,855	-		Echvi_2690	0.43	+0.1
3,196,890	+		Echvi_2690	0.46	+0.8
3,196,969	+		Echvi_2690	0.54	+1.9
3,196,969	+		Echvi_2690	0.54	+0.5
3,196,969	+		Echvi_2690	0.54	-0.7
3,196,973	+		Echvi_2690	0.55	+1.2
3,196,973	+		Echvi_2690	0.55	+1.2
3,196,974	-		Echvi_2690	0.55	+2.4
3,196,974	-		Echvi_2690	0.55	+0.4
3,196,974	-		Echvi_2690	0.55	+0.9
3,197,031	+		Echvi_2690	0.61	-0.4
3,197,031	+		Echvi_2690	0.61	+0.5
3,197,031	+		Echvi_2690	0.61	+1.5
3,197,031	+		Echvi_2690	0.61	-0.4
3,197,032	-		Echvi_2690	0.61	+0.0
3,197,032	-		Echvi_2690	0.61	+0.1
3,197,032	-		Echvi_2690	0.61	-0.4
3,197,052	-		Echvi_2690	0.63	-0.4
3,197,094	-		Echvi_2690	0.67	+0.4
3,197,098	+		Echvi_2690	0.67	+1.2
3,197,099	-		Echvi_2690	0.67	+0.2
3,197,139	+		Echvi_2690	0.72	+1.1
3,197,171	+		Echvi_2690	0.75	+1.7
3,197,190	+		Echvi_2690	0.77	+0.8
3,197,191	-		Echvi_2690	0.77	+1.1
3,197,238	+		Echvi_2690	0.82	-0.4
3,197,239	-		Echvi_2690	0.82	+0.9
3,197,255	+		Echvi_2690	0.83	+0.9
3,197,255	+		Echvi_2690	0.83	+1.2
3,197,256	-		Echvi_2690	0.83	-0.3
3,197,256	-		Echvi_2690	0.83	+0.5
3,197,348	+				+1.2
3,197,349	-				+1.2
3,197,358	-				+0.3
3,197,376	-				-0.9
3,197,376	-				-0.9
3,197,378	-				-0.0
3,197,403	+				+0.6
3,197,421	+				+0.0
3,197,422	-				-0.2