Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2633

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
3,119,872	+				-0.6
3,119,872	+				-0.9
3,119,873	-				+0.3
3,119,877	+				-1.7
3,119,878	-				-0.6
3,119,924	+				+1.3
3,119,925	-				-0.6
3,119,943	+				-0.9
3,119,944	-				+0.9
3,119,971	+				-0.0
3,119,971	+				-0.8
3,119,972	-				+1.6
3,119,972	-				+0.7
3,120,096	-		Echvi_2632	0.19	-0.7
3,120,113	+		Echvi_2632	0.21	-0.3
3,120,169	-		Echvi_2632	0.28	-0.1
3,120,169	-		Echvi_2632	0.28	+2.4
3,120,182	+		Echvi_2632	0.30	-0.1
3,120,294	+		Echvi_2632	0.45	+0.4
3,120,295	-		Echvi_2632	0.45	+1.5
3,120,313	+		Echvi_2632	0.47	-1.3
3,120,314	-		Echvi_2632	0.47	-1.6
3,120,314	-		Echvi_2632	0.47	+0.6
3,120,314	-		Echvi_2632	0.47	+1.7
3,120,381	+		Echvi_2632	0.56	-0.5
3,120,381	+		Echvi_2632	0.56	-0.1
3,120,384	+		Echvi_2632	0.56	+0.6
3,120,399	+		Echvi_2632	0.58	+0.4
3,120,465	+		Echvi_2632	0.67	-0.8
3,120,553	+		Echvi_2632	0.78	+1.4
3,120,554	-		Echvi_2632	0.78	-0.4
3,120,554	-		Echvi_2632	0.78	-0.1
3,120,554	-		Echvi_2632	0.78	-1.0
3,120,554	-		Echvi_2632	0.78	+0.3
3,120,554	-		Echvi_2632	0.78	+0.6
3,120,557	+		Echvi_2632	0.79	+0.1
3,120,558	-		Echvi_2632	0.79	-0.2
3,120,558	-		Echvi_2632	0.79	-0.3
3,120,598	+		Echvi_2632	0.84	+1.2
3,120,599	-		Echvi_2632	0.84	-1.1
3,120,599	-		Echvi_2632	0.84	-0.8
3,120,704	+				-0.1
3,120,715	+				-1.3
3,120,724	-				+0.2
3,120,735	+				-1.2
3,120,743	-				-1.3
3,120,755	+				-0.3
3,120,756	-				-0.4
3,120,756	-				-0.4
3,120,769	-				+0.1
3,120,812	+				+0.1
3,120,850	+				+0.5
3,120,850	+				+0.3
3,120,850	+				+2.5
3,120,855	+				-1.2
3,120,899	-				-2.4
3,120,902	+				-0.1
3,120,906	-				+0.4
3,120,906	-				+1.5
3,120,966	+				-0.8
3,120,966	+				+0.3
3,120,966	+				-1.1
3,120,966	+				+0.1
3,121,031	+		Echvi_2633	0.13	-0.7
3,121,031	+		Echvi_2633	0.13	-0.5
3,121,033	+		Echvi_2633	0.14	+0.5
3,121,033	+		Echvi_2633	0.14	-0.7
3,121,034	-		Echvi_2633	0.14	+1.9
3,121,075	-		Echvi_2633	0.17	+0.7
3,121,080	+		Echvi_2633	0.17	-0.3
3,121,168	-		Echvi_2633	0.25	+1.4
3,121,235	-		Echvi_2633	0.30	+0.3
3,121,271	-		Echvi_2633	0.33	-0.5
3,121,276	-		Echvi_2633	0.34	-0.1
3,121,277	+		Echvi_2633	0.34	-0.1
3,121,278	-		Echvi_2633	0.34	-0.6
3,121,363	-		Echvi_2633	0.41	-1.4
3,121,440	-		Echvi_2633	0.47	-0.3
3,121,533	+		Echvi_2633	0.55	+0.1
3,121,617	+		Echvi_2633	0.62	-2.1
3,121,618	-		Echvi_2633	0.62	+1.0
3,121,676	-		Echvi_2633	0.67	-2.7
3,121,707	+		Echvi_2633	0.70	-0.8
3,121,708	-		Echvi_2633	0.70	+1.1
3,121,766	+		Echvi_2633	0.75	-1.5
3,121,767	-		Echvi_2633	0.75	+0.6
3,121,777	-		Echvi_2633	0.76	+0.0
3,121,852	+		Echvi_2633	0.82	-1.3
3,121,903	+		Echvi_2633	0.86	-1.9
3,121,903	+		Echvi_2633	0.86	+0.2
3,121,903	+		Echvi_2633	0.86	-0.1
3,121,904	-		Echvi_2633	0.86	+1.4
3,121,935	-		Echvi_2633	0.89	-1.1
3,122,063	-				+1.9
3,122,063	-				+0.2
3,122,116	+				+0.2
3,122,116	+				+1.4
3,122,117	-				-0.9
3,122,148	+				+0.3
3,122,227	+				-0.3
3,122,228	-		Echvi_2634	0.10	-1.1
3,122,265	-		Echvi_2634	0.15	+0.3
3,122,275	+		Echvi_2634	0.16	-1.5
3,122,276	-		Echvi_2634	0.16	-0.1
3,122,293	+		Echvi_2634	0.18	+2.0
3,122,293	+		Echvi_2634	0.18	-0.2
3,122,398	+		Echvi_2634	0.31	-0.7
3,122,399	-		Echvi_2634	0.31	-0.7
3,122,400	+		Echvi_2634	0.31	+2.0
3,122,400	+		Echvi_2634	0.31	+0.1
3,122,643	+		Echvi_2634	0.61	+1.2
3,122,643	+		Echvi_2634	0.61	-0.8
3,122,643	+		Echvi_2634	0.61	+0.9
3,122,656	+		Echvi_2634	0.63	-1.5
3,122,656	+		Echvi_2634	0.63	+0.1
3,122,657	-		Echvi_2634	0.63	-0.0
3,122,661	+		Echvi_2634	0.64	-2.4
3,122,664	+		Echvi_2634	0.64	+0.5
3,122,722	+		Echvi_2634	0.71	+0.1
3,122,860	+		Echvi_2634	0.88	+0.4
3,122,900	+				-0.7
3,122,900	+				+0.5
3,122,926	+				-0.6
3,122,929	+				+1.1
3,122,969	+				+1.1
3,122,981	-				-0.1