Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2626

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
3,112,243	-				-1.2
3,112,262	-				+0.8
3,112,262	-				+0.9
3,112,262	-				-0.6
3,112,262	-				-0.3
3,112,265	-				+0.5
3,112,363	-		Echvi_2624	0.23	+1.5
3,112,415	+		Echvi_2624	0.34	-2.9
3,112,459	+		Echvi_2624	0.42	-0.1
3,112,459	+		Echvi_2624	0.42	-2.1
3,112,471	-		Echvi_2624	0.45	+1.1
3,112,517	+		Echvi_2624	0.54	-2.2
3,112,540	-		Echvi_2624	0.59	-0.1
3,112,559	-		Echvi_2624	0.62	+0.2
3,112,559	-		Echvi_2624	0.62	-1.9
3,112,751	-				-0.6
3,112,778	+				-1.3
3,112,778	+				-1.0
3,112,779	-				+0.4
3,112,779	-				+1.1
3,112,918	-		Echvi_2625	0.34	+1.5
3,112,948	+		Echvi_2625	0.40	+0.2
3,112,949	-		Echvi_2625	0.40	+0.2
3,112,949	-		Echvi_2625	0.40	-0.9
3,112,949	-		Echvi_2625	0.40	+0.2
3,112,949	-		Echvi_2625	0.40	-0.7
3,113,116	-		Echvi_2625	0.76	+1.0
3,113,116	-		Echvi_2625	0.76	-1.3
3,113,140	+		Echvi_2625	0.81	-0.7
3,113,168	-		Echvi_2625	0.87	+0.5
3,113,178	+		Echvi_2625	0.89	+0.7
3,113,179	-		Echvi_2625	0.90	+0.1
3,113,225	+				-0.2
3,113,272	-				+1.1
3,113,272	-				-0.4
3,113,330	+		Echvi_2626	0.12	-1.4
3,113,349	+		Echvi_2626	0.15	-0.5
3,113,360	+		Echvi_2626	0.16	+0.7
3,113,361	-		Echvi_2626	0.16	+0.3
3,113,361	-		Echvi_2626	0.16	+1.4
3,113,371	+		Echvi_2626	0.17	-0.3
3,113,403	+		Echvi_2626	0.21	-0.7
3,113,404	-		Echvi_2626	0.22	-0.4
3,113,404	-		Echvi_2626	0.22	+0.4
3,113,494	-		Echvi_2626	0.33	+0.5
3,113,506	+		Echvi_2626	0.34	-0.9
3,113,507	-		Echvi_2626	0.34	-0.6
3,113,566	+		Echvi_2626	0.42	-0.6
3,113,566	+		Echvi_2626	0.42	-0.8
3,113,578	+		Echvi_2626	0.43	+0.1
3,113,594	+				-0.1
3,113,595	-		Echvi_2626	0.46	-0.3
3,113,630	-		Echvi_2626	0.50	-0.1
3,113,740	-		Echvi_2626	0.64	+0.2
3,113,740	-		Echvi_2626	0.64	-1.8
3,113,785	-		Echvi_2626	0.69	-0.3
3,113,789	+		Echvi_2626	0.70	-1.5
3,113,789	+		Echvi_2626	0.70	+1.9
3,113,790	-		Echvi_2626	0.70	-0.5
3,113,812	+		Echvi_2626	0.73	-1.4
3,113,813	-		Echvi_2626	0.73	-1.5
3,113,813	-		Echvi_2626	0.73	-0.1
3,113,813	-		Echvi_2626	0.73	-1.1
3,113,813	-		Echvi_2626	0.73	-1.0
3,113,813	-		Echvi_2626	0.73	-0.2
3,113,813	-		Echvi_2626	0.73	-0.9
3,113,845	+		Echvi_2626	0.77	+0.3
3,113,846	-		Echvi_2626	0.77	-0.1
3,113,846	-		Echvi_2626	0.77	+0.8
3,113,846	-		Echvi_2626	0.77	-1.8
3,113,846	-		Echvi_2626	0.77	+1.1
3,113,860	+		Echvi_2626	0.79	-3.8
3,113,860	+		Echvi_2626	0.79	-1.9
3,113,860	+		Echvi_2626	0.79	-1.1
3,113,873	-		Echvi_2626	0.81	-0.6
3,113,875	-		Echvi_2626	0.81	-0.6
3,113,875	-		Echvi_2626	0.81	-0.5
3,113,914	+		Echvi_2626	0.86	+0.1
3,113,929	+		Echvi_2626	0.88	-0.9
3,113,930	-		Echvi_2626	0.88	+0.2
3,113,930	-		Echvi_2626	0.88	+1.3
3,113,932	+		Echvi_2626	0.88	+0.2
3,113,977	+				-0.2
3,113,983	+				-0.5
3,113,985	+				-0.4
3,113,985	+				-0.1
3,113,986	-				+0.6
3,113,986	-				-0.0
3,113,986	-				-0.3
3,113,987	+				-2.7
3,113,987	+				+0.1
3,113,987	+				-0.3
3,113,987	+				-1.0
3,113,988	-				-0.9
3,113,988	-				-0.3
3,113,988	-				+1.3
3,113,988	-				-0.2
3,113,988	-				+0.4
3,113,988	-				-1.7
3,113,988	-				-0.3
3,113,988	-				-1.5
3,113,988	-				+0.9
3,114,001	-				+0.5
3,114,031	+				+1.7
3,114,032	-				+0.3
3,114,032	-				-0.2
3,114,059	+				-0.5
3,114,079	+				-1.1
3,114,080	-				+0.2
3,114,084	+				+0.3
3,114,085	-				+1.7
3,114,157	+				-0.5
3,114,157	+				-1.1
3,114,214	+				-2.9
3,114,229	+				-0.3
3,114,229	+				-0.1
3,114,276	-				+0.1
3,114,351	-				+0.3
3,114,351	-				+0.6
3,114,355	-				-3.0
3,114,355	-				-1.0
3,114,413	+				+2.5
3,114,413	+				-0.0
3,114,448	-				+0.4
3,114,453	-				+0.9
3,114,539	-				+0.5
3,114,595	+				-0.7
3,114,595	+				-0.1
3,114,595	+				-0.2
3,114,595	+				+0.1
3,114,596	-				+2.6
3,114,596	-				+0.4
3,114,596	-				+0.6
3,114,603	-				+0.5
3,114,603	-				+0.1
3,114,709	+				+2.2
3,114,798	+				-0.8
3,114,798	+				-0.5
3,114,799	-				-0.1
3,114,820	+				-0.4
3,114,820	+				-0.1
3,114,820	+				-0.0
3,114,821	-				+1.0
3,114,826	+				+1.0
3,114,846	-				-0.6
3,114,856	-				+2.1
3,114,856	-				+1.1
3,114,944	+		Echvi_2627	0.33	+0.6
3,114,944	+		Echvi_2627	0.33	-0.5
3,114,944	+		Echvi_2627	0.33	+0.6
3,114,945	-		Echvi_2627	0.34	+1.9
3,114,945	-		Echvi_2627	0.34	-0.1
3,114,945	-		Echvi_2627	0.34	-1.2
3,114,945	-		Echvi_2627	0.34	+0.5
3,115,010	+		Echvi_2627	0.61	-0.7
3,115,010	+		Echvi_2627	0.61	-0.1
3,115,011	-		Echvi_2627	0.62	-0.2
3,115,011	-		Echvi_2627	0.62	+0.0