Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2620

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
3,105,915	-		Echvi_2618	0.79	-0.9
3,105,915	-		Echvi_2618	0.79	+0.6
3,105,930	-		Echvi_2618	0.81	-0.5
3,105,930	-		Echvi_2618	0.81	-0.0
3,105,930	-		Echvi_2618	0.81	+0.1
3,105,931	+		Echvi_2618	0.81	-1.0
3,105,952	+		Echvi_2618	0.84	-0.2
3,106,007	+				+0.3
3,106,166	+				-0.0
3,106,196	+				-0.4
3,106,209	+		Echvi_2619	0.10	-1.3
3,106,217	-		Echvi_2619	0.12	-0.8
3,106,284	+		Echvi_2619	0.23	-0.5
3,106,284	+		Echvi_2619	0.23	+0.4
3,106,290	+		Echvi_2619	0.24	-0.1
3,106,484	+		Echvi_2619	0.57	-0.2
3,106,485	-		Echvi_2619	0.57	+2.9
3,106,488	+		Echvi_2619	0.58	-0.4
3,106,489	-		Echvi_2619	0.58	+1.1
3,106,489	-		Echvi_2619	0.58	-1.4
3,106,604	+		Echvi_2619	0.77	+0.5
3,106,605	-		Echvi_2619	0.77	-1.8
3,106,608	-		Echvi_2619	0.78	+0.3
3,106,679	+				-1.0
3,106,679	+				+0.0
3,106,680	-				+0.3
3,106,680	-				+0.8
3,106,680	-				+0.4
3,106,774	-				+0.2
3,107,038	-		Echvi_2620	0.13	-0.5
3,107,048	+		Echvi_2620	0.14	-1.0
3,107,115	-		Echvi_2620	0.20	+1.9
3,107,179	-		Echvi_2620	0.26	-1.5
3,107,197	+		Echvi_2620	0.28	-0.3
3,107,198	-		Echvi_2620	0.28	-2.3
3,107,198	-		Echvi_2620	0.28	-1.1
3,107,211	-		Echvi_2620	0.29	-0.5
3,107,218	+		Echvi_2620	0.29	+1.0
3,107,333	+		Echvi_2620	0.40	-1.0
3,107,333	+		Echvi_2620	0.40	+0.1
3,107,333	+		Echvi_2620	0.40	-1.3
3,107,333	+		Echvi_2620	0.40	+1.9
3,107,334	-		Echvi_2620	0.40	-0.7
3,107,469	-		Echvi_2620	0.52	-0.6
3,107,479	-		Echvi_2620	0.53	-0.1
3,107,495	+		Echvi_2620	0.54	-0.3
3,107,512	+		Echvi_2620	0.56	-0.6
3,107,512	+		Echvi_2620	0.56	-0.6
3,107,513	-		Echvi_2620	0.56	+0.5
3,107,552	-		Echvi_2620	0.59	+0.4
3,107,572	-		Echvi_2620	0.61	-1.2
3,107,587	+		Echvi_2620	0.62	+1.5
3,107,587	+		Echvi_2620	0.62	-0.8
3,107,587	+		Echvi_2620	0.62	-0.1
3,107,587	+		Echvi_2620	0.62	-0.0
3,107,588	-		Echvi_2620	0.62	-1.5
3,107,588	-		Echvi_2620	0.62	+0.4
3,107,588	-		Echvi_2620	0.62	+0.6
3,107,588	-		Echvi_2620	0.62	-0.4
3,107,592	+		Echvi_2620	0.63	+0.4
3,107,592	+		Echvi_2620	0.63	-0.4
3,107,592	+		Echvi_2620	0.63	-0.9
3,107,593	-		Echvi_2620	0.63	+0.5
3,107,605	+		Echvi_2620	0.64	-0.1
3,107,699	+		Echvi_2620	0.72	-0.1
3,107,706	+		Echvi_2620	0.73	+0.9
3,107,707	-		Echvi_2620	0.73	-0.0
3,107,707	-		Echvi_2620	0.73	-0.9
3,107,716	+		Echvi_2620	0.74	-0.1
3,107,716	+		Echvi_2620	0.74	+0.5
3,107,717	-		Echvi_2620	0.74	+0.2
3,107,774	+		Echvi_2620	0.79	-0.5
3,107,774	+		Echvi_2620	0.79	+3.2
3,107,775	-		Echvi_2620	0.79	-0.4
3,107,775	-		Echvi_2620	0.79	-0.5
3,107,797	-		Echvi_2620	0.81	-1.7
3,107,820	+		Echvi_2620	0.83	-0.7
3,107,821	-		Echvi_2620	0.83	+1.9
3,107,821	-		Echvi_2620	0.83	-1.5
3,107,850	+		Echvi_2620	0.86	-0.0
3,107,850	+		Echvi_2620	0.86	-0.5
3,107,850	+		Echvi_2620	0.86	-1.3
3,107,850	+		Echvi_2620	0.86	+0.6
3,107,851	-		Echvi_2620	0.86	+0.9
3,107,851	-		Echvi_2620	0.86	+0.7
3,107,851	-		Echvi_2620	0.86	+0.3
3,107,851	-		Echvi_2620	0.86	+0.5
3,107,923	-				-1.6
3,107,941	-				-0.1
3,107,941	-				-1.8
3,107,941	-				+1.5
3,107,941	-				+0.4
3,107,989	-				+2.6
3,107,998	+				+0.0
3,108,055	-				+1.1
3,108,065	+				+0.6
3,108,080	-				+0.2
3,108,091	+				+0.6
3,108,139	+				+0.2
3,108,159	+				+0.4
3,108,160	-				-1.1
3,108,190	+				-2.2
3,108,190	+				+0.4
3,108,190	+				+0.6
3,108,201	+				-0.2
3,108,224	-				-0.2
3,108,240	+				-0.4
3,108,283	-				-1.6
3,108,285	+				-0.3
3,108,285	+				-1.0
3,108,286	-				+0.3
3,108,286	-				+0.1
3,108,287	+				+0.0
3,108,288	-				+0.3
3,108,289	+				+0.7
3,108,289	+				+0.4
3,108,289	+				+0.4
3,108,289	+				-0.4
3,108,290	-				+0.6
3,108,294	+		Echvi_2621	0.10	-0.7
3,108,295	-		Echvi_2621	0.10	+0.3
3,108,295	-		Echvi_2621	0.10	-0.6
3,108,398	-		Echvi_2621	0.21	-0.3
3,108,412	+		Echvi_2621	0.22	+0.7
3,108,436	+		Echvi_2621	0.25	+0.0
3,108,440	-		Echvi_2621	0.25	+0.6
3,108,440	-		Echvi_2621	0.25	-0.2
3,108,480	-		Echvi_2621	0.29	+1.6
3,108,491	+		Echvi_2621	0.30	-0.6
3,108,579	+		Echvi_2621	0.39	-0.9
3,108,579	+		Echvi_2621	0.39	+0.6
3,108,579	+		Echvi_2621	0.39	+0.6
3,108,580	-		Echvi_2621	0.39	-0.1
3,108,586	+		Echvi_2621	0.40	+0.7
3,108,586	+		Echvi_2621	0.40	+0.3
3,108,587	-		Echvi_2621	0.40	-0.7
3,108,589	+		Echvi_2621	0.40	+0.7
3,108,601	-		Echvi_2621	0.42	-0.0
3,108,605	+		Echvi_2621	0.42	-0.1
3,108,605	+		Echvi_2621	0.42	+0.3
3,108,606	-		Echvi_2621	0.42	-0.5
3,108,609	+		Echvi_2621	0.42	-1.1
3,108,609	+		Echvi_2621	0.42	-0.0
3,108,615	+		Echvi_2621	0.43	-0.5
3,108,616	-		Echvi_2621	0.43	-0.4
3,108,638	-		Echvi_2621	0.45	+0.5
3,108,747	-		Echvi_2621	0.56	+0.6
3,108,747	-		Echvi_2621	0.56	-1.0
3,108,756	-		Echvi_2621	0.57	+0.3
3,108,756	-		Echvi_2621	0.57	+0.3
3,108,756	-		Echvi_2621	0.57	-0.5
3,108,756	-		Echvi_2621	0.57	-1.7
3,108,756	-		Echvi_2621	0.57	+0.6
3,108,756	-		Echvi_2621	0.57	+0.1
3,108,758	-		Echvi_2621	0.58	-2.1
3,108,834	+		Echvi_2621	0.65	-0.2
3,108,894	+		Echvi_2621	0.71	-1.0
3,108,911	+		Echvi_2621	0.73	-0.6
3,108,912	-		Echvi_2621	0.73	+0.7
3,108,912	-		Echvi_2621	0.73	-0.0
3,108,912	-		Echvi_2621	0.73	+0.9
3,108,912	-		Echvi_2621	0.73	-1.1
3,108,916	-		Echvi_2621	0.74	+0.8
3,108,953	-		Echvi_2621	0.77	-0.2
3,108,953	-		Echvi_2621	0.77	+1.9
3,108,953	-		Echvi_2621	0.77	+0.8
3,108,953	-		Echvi_2621	0.77	-0.9
3,108,953	-		Echvi_2621	0.77	+1.6
3,108,955	+		Echvi_2621	0.78	-0.1
3,108,956	-		Echvi_2621	0.78	+0.0
3,108,956	-		Echvi_2621	0.78	-1.0