Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2565

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
3,041,249	+		Echvi_2564	0.30	+0.3
3,041,314	+		Echvi_2564	0.35	-0.4
3,041,314	+		Echvi_2564	0.35	+0.2
3,041,314	+		Echvi_2564	0.35	+0.1
3,041,348	+		Echvi_2564	0.37	-0.9
3,041,480	+		Echvi_2564	0.47	+1.2
3,041,571	-		Echvi_2564	0.54	+0.0
3,041,604	-		Echvi_2564	0.56	-1.1
3,041,604	-		Echvi_2564	0.56	+0.9
3,041,614	-		Echvi_2564	0.57	-0.9
3,041,702	-		Echvi_2564	0.63	-1.2
3,041,702	-		Echvi_2564	0.63	+0.0
3,041,800	-		Echvi_2564	0.70	-0.6
3,041,809	+		Echvi_2564	0.71	+1.1
3,041,810	-		Echvi_2564	0.71	+0.1
3,041,823	+		Echvi_2564	0.72	+0.5
3,041,824	-		Echvi_2564	0.72	-0.1
3,041,825	+		Echvi_2564	0.72	+1.3
3,041,826	-		Echvi_2564	0.72	+0.3
3,041,960	-		Echvi_2564	0.82	+0.3
3,042,190	+				-0.9
3,042,191	-				+0.3
3,042,191	-				-1.2
3,042,200	+				-2.1
3,042,200	+				-0.6
3,042,200	+				-3.5
3,042,200	+				-1.0
3,042,200	+				-0.7
3,042,200	+				-2.4
3,042,201	-				+0.2
3,042,201	-				+0.1
3,042,201	-				-1.5
3,042,202	+				-2.1
3,042,202	+				-0.7
3,042,202	+				-1.1
3,042,202	+				-0.4
3,042,202	+				-1.1
3,042,203	-				+0.1
3,042,203	-				-1.7
3,042,203	-				+1.7
3,042,239	+				-0.9
3,042,318	-				+0.7
3,042,350	-		Echvi_2565	0.15	+0.3
3,042,388	-		Echvi_2565	0.20	-0.3
3,042,388	-		Echvi_2565	0.20	+0.1
3,042,509	+		Echvi_2565	0.38	-0.3
3,042,509	+		Echvi_2565	0.38	-2.6
3,042,509	+		Echvi_2565	0.38	-1.6
3,042,510	-		Echvi_2565	0.38	-1.3
3,042,510	-		Echvi_2565	0.38	-0.1
3,042,530	+				+0.9
3,042,543	-		Echvi_2565	0.42	+0.4
3,042,555	-		Echvi_2565	0.44	-0.1
3,042,555	-		Echvi_2565	0.44	-1.5
3,042,562	-		Echvi_2565	0.45	+0.8
3,042,650	+		Echvi_2565	0.58	-2.4
3,042,650	+		Echvi_2565	0.58	-1.7
3,042,885	-				-1.4
3,042,885	-				+0.7
3,043,037	+				-0.2
3,043,154	+				-0.1
3,043,206	+		Echvi_2566	0.13	-1.6
3,043,206	+		Echvi_2566	0.13	+0.4
3,043,206	+		Echvi_2566	0.13	-1.8
3,043,206	+		Echvi_2566	0.13	-0.8
3,043,206	+		Echvi_2566	0.13	-0.1
3,043,207	-		Echvi_2566	0.13	-1.7
3,043,207	-		Echvi_2566	0.13	+0.4
3,043,207	-		Echvi_2566	0.13	-1.4
3,043,207	-		Echvi_2566	0.13	-0.8
3,043,207	-		Echvi_2566	0.13	+1.2
3,043,210	+		Echvi_2566	0.13	-0.0
3,043,210	+		Echvi_2566	0.13	-1.8
3,043,211	-		Echvi_2566	0.13	+0.7
3,043,211	-		Echvi_2566	0.13	+0.5
3,043,211	-		Echvi_2566	0.13	-0.6
3,043,211	-		Echvi_2566	0.13	-0.6
3,043,282	+		Echvi_2566	0.21	-1.6
3,043,296	+		Echvi_2566	0.22	-0.7
3,043,297	-		Echvi_2566	0.22	+1.3
3,043,300	+		Echvi_2566	0.23	+0.6
3,043,300	+		Echvi_2566	0.23	-1.1
3,043,300	+		Echvi_2566	0.23	-0.9
3,043,301	-		Echvi_2566	0.23	+1.0
3,043,465	-		Echvi_2566	0.39	+0.5
3,043,525	-		Echvi_2566	0.46	+0.7
3,043,525	-		Echvi_2566	0.46	-1.5
3,043,525	-		Echvi_2566	0.46	+2.5
3,043,525	-		Echvi_2566	0.46	+0.5
3,043,526	+		Echvi_2566	0.46	-1.6
3,043,526	+		Echvi_2566	0.46	+0.2
3,043,526	+		Echvi_2566	0.46	-0.6
3,043,532	+		Echvi_2566	0.46	+0.2
3,043,532	+		Echvi_2566	0.46	-1.0
3,043,532	+		Echvi_2566	0.46	-1.1
3,043,532	+		Echvi_2566	0.46	-1.1
3,043,532	+		Echvi_2566	0.46	-1.1
3,043,533	-		Echvi_2566	0.46	-1.4
3,043,533	-		Echvi_2566	0.46	-0.4
3,043,533	-		Echvi_2566	0.46	-0.8
3,043,534	+		Echvi_2566	0.47	+0.3
3,043,535	-		Echvi_2566	0.47	-0.4
3,043,535	-		Echvi_2566	0.47	-1.1
3,043,535	-		Echvi_2566	0.47	+0.5
3,043,566	-		Echvi_2566	0.50	+4.9
3,043,567	+		Echvi_2566	0.50	-1.7
3,043,568	-		Echvi_2566	0.50	+0.1
3,043,592	+		Echvi_2566	0.52	-0.1
3,043,609	+		Echvi_2566	0.54	+0.1
3,043,609	+		Echvi_2566	0.54	-0.5
3,043,609	+		Echvi_2566	0.54	+0.9
3,043,610	-		Echvi_2566	0.54	+0.8
3,043,610	-		Echvi_2566	0.54	+0.4
3,043,636	+		Echvi_2566	0.57	-0.4
3,043,840	+		Echvi_2566	0.78	-0.4
3,043,841	-		Echvi_2566	0.78	-0.4