Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2558

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
3,032,321	+				-1.1
3,032,321	+				+0.2
3,032,706	+				-0.2
3,032,745	-				-0.3
3,032,750	-				-1.6
3,032,778	-				+0.8
3,032,834	-				-3.6
3,032,835	+				+0.7
3,032,836	-				+0.2
3,032,836	-				-0.1
3,033,040	+		Echvi_2558	0.15	-0.3
3,033,047	+		Echvi_2558	0.16	+0.1
3,033,047	+				+1.9
3,033,085	+		Echvi_2558	0.20	-0.1
3,033,086	-		Echvi_2558	0.20	-0.7
3,033,094	+		Echvi_2558	0.21	-1.8
3,033,095	-		Echvi_2558	0.21	-0.9
3,033,095	-		Echvi_2558	0.21	-1.7
3,033,095	-		Echvi_2558	0.21	-1.1
3,033,095	-		Echvi_2558	0.21	-0.8
3,033,108	-		Echvi_2558	0.22	+0.0
3,033,131	+		Echvi_2558	0.25	-0.4
3,033,131	+		Echvi_2558	0.25	+1.3
3,033,132	-		Echvi_2558	0.25	-0.2
3,033,132	-		Echvi_2558	0.25	+0.7
3,033,137	+		Echvi_2558	0.25	-0.6
3,033,137	+		Echvi_2558	0.25	-0.7
3,033,137	+		Echvi_2558	0.25	-1.4
3,033,137	+		Echvi_2558	0.25	+0.4
3,033,138	-		Echvi_2558	0.26	-0.8
3,033,138	-		Echvi_2558	0.26	+0.2
3,033,138	-		Echvi_2558	0.26	-0.7
3,033,138	-		Echvi_2558	0.26	+0.8
3,033,138	-		Echvi_2558	0.26	+0.5
3,033,149	+		Echvi_2558	0.27	+1.1
3,033,149	+		Echvi_2558	0.27	-0.9
3,033,150	-		Echvi_2558	0.27	+1.5
3,033,150	-		Echvi_2558	0.27	+0.3
3,033,233	+		Echvi_2558	0.36	+0.1
3,033,234	-		Echvi_2558	0.36	-1.0
3,033,270	+		Echvi_2558	0.39	-1.4
3,033,278	-		Echvi_2558	0.40	-0.2
3,033,310	+		Echvi_2558	0.44	+0.9
3,033,454	-		Echvi_2558	0.59	-0.2
3,033,464	-		Echvi_2558	0.60	-0.4
3,033,466	-		Echvi_2558	0.60	-0.4
3,033,471	-		Echvi_2558	0.60	-0.7
3,033,471	-		Echvi_2558	0.60	-0.1
3,033,490	+		Echvi_2558	0.62	+0.6
3,033,504	-		Echvi_2558	0.64	+0.6
3,033,544	+		Echvi_2558	0.68	-0.4
3,033,545	-		Echvi_2558	0.68	+0.6
3,033,587	+		Echvi_2558	0.73	-1.0
3,033,587	+		Echvi_2558	0.73	-0.4
3,033,588	-		Echvi_2558	0.73	+1.1
3,033,591	+		Echvi_2558	0.73	-1.4
3,033,591	+		Echvi_2558	0.73	+0.7
3,033,591	+		Echvi_2558	0.73	-0.9
3,033,591	+		Echvi_2558	0.73	-0.9
3,033,592	-		Echvi_2558	0.73	-1.0
3,033,592	-		Echvi_2558	0.73	+1.7
3,033,592	-		Echvi_2558	0.73	-0.2
3,033,592	-		Echvi_2558	0.73	-0.3
3,033,592	-		Echvi_2558	0.73	-1.4
3,033,592	-		Echvi_2558	0.73	-0.6
3,033,592	-		Echvi_2558	0.73	+0.7
3,033,592	-		Echvi_2558	0.73	-0.4
3,033,592	-		Echvi_2558	0.73	-0.8
3,033,592	-		Echvi_2558	0.73	+0.4
3,033,616	+		Echvi_2558	0.76	-2.4
3,033,617	-		Echvi_2558	0.76	-0.1
3,033,649	+		Echvi_2558	0.79	+0.0
3,033,727	+		Echvi_2558	0.87	-0.0
3,033,727	+		Echvi_2558	0.87	+2.2
3,033,798	-				-0.4
3,033,854	-				-0.0
3,033,870	-				-0.7
3,033,877	+				+0.1
3,033,877	+				-0.7
3,034,038	-				-0.1
3,034,061	+				-0.8
3,034,061	+				-0.6
3,034,071	+				-0.4
3,034,082	+				+0.2
3,034,082	+				-3.0
3,034,083	-				-1.8
3,034,083	-				+0.6
3,034,107	-				+0.1
3,034,110	-				+0.5
3,034,158	-				-0.7
3,034,302	+				+0.5
3,034,303	-				+2.5
3,034,343	-				+1.3
3,034,343	-				+0.2
3,034,393	-				-1.2
3,034,440	+				-0.3
3,034,440	+				-0.8
3,034,441	-				+0.7
3,034,441	-				+0.8
3,034,445	-				-1.1
3,034,445	-				-1.3
3,034,453	-				+1.3
3,034,467	-				-0.2
3,034,472	-				+0.5
3,034,537	-				+1.4
3,034,810	-		Echvi_2559	0.15	-0.7
3,034,836	+		Echvi_2559	0.16	+0.4
3,034,836	+		Echvi_2559	0.16	+0.4
3,034,836	+		Echvi_2559	0.16	-0.1
3,034,837	-		Echvi_2559	0.16	-0.1
3,034,842	+		Echvi_2559	0.16	-0.6
3,034,842	+		Echvi_2559	0.16	+0.6
3,034,842	+		Echvi_2559	0.16	-0.7