Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2536

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
3,011,836	+		Echvi_2535	0.53	+0.2
3,011,935	+		Echvi_2535	0.63	-0.3
3,011,935	+		Echvi_2535	0.63	+0.9
3,011,935	+		Echvi_2535	0.63	-2.0
3,011,935	+		Echvi_2535	0.63	+0.5
3,011,936	-		Echvi_2535	0.64	-0.4
3,011,936	-		Echvi_2535	0.64	-0.0
3,011,936	-		Echvi_2535	0.64	+0.3
3,011,977	+		Echvi_2535	0.68	+0.8
3,011,978	-		Echvi_2535	0.68	-0.2
3,011,978	-		Echvi_2535	0.68	+0.1
3,011,985	+		Echvi_2535	0.69	-1.6
3,011,985	+		Echvi_2535	0.69	+0.0
3,011,990	-		Echvi_2535	0.69	+0.5
3,012,053	+		Echvi_2535	0.76	+0.2
3,012,053	+		Echvi_2535	0.76	-0.4
3,012,054	-		Echvi_2535	0.76	-1.2
3,012,054	-		Echvi_2535	0.76	+0.9
3,012,077	-		Echvi_2535	0.78	-0.1
3,012,122	-		Echvi_2535	0.83	-1.2
3,012,237	-				+0.1
3,012,259	-				+0.3
3,012,281	+				-0.4
3,012,299	+				-0.5
3,012,300	-				-0.1
3,012,301	+				+0.7
3,012,309	-				+0.3
3,012,351	+				+0.1
3,012,351	+				-0.7
3,012,351	+				+0.7
3,012,352	-				-0.4
3,012,416	+				+0.5
3,012,416	+				+0.0
3,012,417	-				+1.4
3,012,417	-				+0.4
3,012,417	-				+1.6
3,012,423	+				+2.1
3,012,423	+				+0.3
3,012,424	-				-0.0
3,012,424	-				+0.3
3,012,679	-				-0.4
3,012,727	+				+0.7
3,012,727	+				-0.2
3,012,728	-				-0.8
3,012,728	-				-0.4
3,012,728	-				-1.0
3,012,737	-				+0.2
3,012,754	+				+0.4
3,012,754	+				-0.4
3,012,754	+				+0.2
3,012,756	+				+0.4
3,012,766	-				-0.8
3,012,779	-				-0.8
3,012,788	+				-0.9
3,012,788	+				+2.9
3,012,789	-				+0.5
3,012,789	-				+0.8
3,012,792	-				-0.9
3,012,800	+				+0.7
3,012,800	+				+2.5
3,012,818	+				+0.9
3,012,900	+		Echvi_2536	0.30	-1.2
3,012,901	-		Echvi_2536	0.30	-1.6
3,012,940	+		Echvi_2536	0.41	-0.4
3,012,941	-		Echvi_2536	0.41	-0.3
3,012,956	+		Echvi_2536	0.45	-0.7
3,012,957	-		Echvi_2536	0.46	+1.1
3,012,957	-		Echvi_2536	0.46	-0.1
3,012,957	-		Echvi_2536	0.46	-2.2
3,012,957	-		Echvi_2536	0.46	-0.4
3,012,957	-		Echvi_2536	0.46	+0.1
3,012,958	+		Echvi_2536	0.46	-0.7
3,012,958	+		Echvi_2536	0.46	-0.4
3,012,959	-		Echvi_2536	0.46	-0.4
3,013,024	-		Echvi_2536	0.65	-1.3
3,013,024	-		Echvi_2536	0.65	+0.7
3,013,087	+		Echvi_2536	0.82	-0.5
3,013,087	+		Echvi_2536	0.82	+0.5
3,013,088	-		Echvi_2536	0.83	+0.1
3,013,134	+				+0.0
3,013,135	-				+0.7
3,013,238	-				+0.5
3,013,254	+				-1.1
3,013,254	+				-0.2
3,013,254	+				-0.2
3,013,255	-				-1.1
3,013,255	-				-0.2
3,013,302	-		Echvi_2537	0.12	-1.8
3,013,307	-		Echvi_2537	0.13	+0.1
3,013,315	+		Echvi_2537	0.14	+0.7
3,013,315	+		Echvi_2537	0.14	-1.4
3,013,316	-		Echvi_2537	0.14	-0.1
3,013,316	-		Echvi_2537	0.14	-1.9
3,013,335	+		Echvi_2537	0.16	-0.6
3,013,336	-		Echvi_2537	0.16	-0.2
3,013,336	-		Echvi_2537	0.16	-1.0
3,013,337	+		Echvi_2537	0.16	-0.0
3,013,337	+		Echvi_2537	0.16	-2.3
3,013,337	+		Echvi_2537	0.16	+0.4
3,013,338	-		Echvi_2537	0.16	+1.6
3,013,338	-		Echvi_2537	0.16	+0.5
3,013,371	-		Echvi_2537	0.19	-0.1
3,013,371	-		Echvi_2537	0.19	+0.1
3,013,371	-		Echvi_2537	0.19	+0.4
3,013,381	-		Echvi_2537	0.20	-0.2
3,013,397	-		Echvi_2537	0.22	+1.3
3,013,451	+		Echvi_2537	0.27	-0.7
3,013,452	-		Echvi_2537	0.27	+0.1
3,013,452	-		Echvi_2537	0.27	-1.0
3,013,452	-		Echvi_2537	0.27	-0.4
3,013,452	-		Echvi_2537	0.27	-2.0
3,013,458	+		Echvi_2537	0.28	-0.6
3,013,459	-		Echvi_2537	0.28	+0.5
3,013,472	-		Echvi_2537	0.29	-0.3
3,013,478	+		Echvi_2537	0.30	+0.0
3,013,505	-		Echvi_2537	0.32	+0.3
3,013,505	-		Echvi_2537	0.32	+0.4
3,013,555	+		Echvi_2537	0.37	-0.2
3,013,555	+		Echvi_2537	0.37	-0.3
3,013,555	+		Echvi_2537	0.37	+0.7
3,013,565	-		Echvi_2537	0.38	-0.6
3,013,565	-		Echvi_2537	0.38	+3.2
3,013,639	-		Echvi_2537	0.46	-0.9
3,013,676	-		Echvi_2537	0.49	+0.6
3,013,676	-		Echvi_2537	0.49	-1.1
3,013,677	+		Echvi_2537	0.49	-0.2
3,013,677	+		Echvi_2537	0.49	-0.3
3,013,678	-		Echvi_2537	0.50	+1.9
3,013,678	-		Echvi_2537	0.50	+0.9
3,013,678	-		Echvi_2537	0.50	+1.4
3,013,678	-		Echvi_2537	0.50	+1.3
3,013,680	-		Echvi_2537	0.50	-1.0
3,013,732	-		Echvi_2537	0.55	+0.1
3,013,732	-		Echvi_2537	0.55	-1.6
3,013,734	-		Echvi_2537	0.55	-0.1
3,013,734	-		Echvi_2537	0.55	-0.6
3,013,736	+		Echvi_2537	0.55	+1.1
3,013,793	+		Echvi_2537	0.61	+0.6
3,013,811	+		Echvi_2537	0.63	+0.4
3,013,841	+		Echvi_2537	0.66	+0.5
3,013,848	-		Echvi_2537	0.66	-0.1
3,013,876	+		Echvi_2537	0.69	-0.7
3,013,877	-		Echvi_2537	0.69	+0.9
3,013,877	-		Echvi_2537	0.69	+0.8
3,013,902	-		Echvi_2537	0.72	-1.2
3,013,902	-		Echvi_2537	0.72	+0.7
3,013,903	+		Echvi_2537	0.72	+0.2
3,013,904	-		Echvi_2537	0.72	-1.3
3,014,017	+		Echvi_2537	0.83	-0.2
3,014,018	-		Echvi_2537	0.83	-0.7
3,014,055	+		Echvi_2537	0.87	-0.9
3,014,055	+		Echvi_2537	0.87	+0.6
3,014,055	+		Echvi_2537	0.87	-0.4
3,014,056	-		Echvi_2537	0.87	-0.3
3,014,056	-		Echvi_2537	0.87	-1.2
3,014,069	+		Echvi_2537	0.88	+1.9
3,014,070	-		Echvi_2537	0.88	-0.6
3,014,089	-				+0.6