Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2520

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
2,990,319	+		Echvi_2518	0.88	-0.0
2,990,319	+		Echvi_2518	0.88	+0.4
2,990,320	-		Echvi_2518	0.88	+0.4
2,990,333	+		Echvi_2518	0.89	+0.7
2,990,334	-		Echvi_2518	0.89	-1.6
2,990,354	+				-1.0
2,990,354	+				+0.3
2,990,354	+				-1.2
2,990,354	+				-1.6
2,990,355	-				-0.1
2,990,356	+				+0.2
2,990,356	+				-0.1
2,990,356	+				-0.4
2,990,430	+				+1.5
2,990,439	+				-0.2
2,990,442	+				+0.6
2,990,442	+				-0.6
2,990,452	-				+0.6
2,990,452	-				-0.9
2,990,488	-				-0.1
2,990,499	+				+0.6
2,990,500	-				-3.3
2,990,500	-				-0.1
2,990,502	-				-2.4
2,990,518	+				+0.2
2,990,519	-				+2.7
2,990,567	-				+0.0
2,990,610	+				-0.1
2,990,610	+				+1.9
2,990,610	+				+0.2
2,990,611	-				+0.3
2,990,611	-				-0.8
2,990,611	-				-1.1
2,990,611	-				-0.1
2,990,611	-				-0.8
2,990,611	-				-0.1
2,990,611	-				+0.5
2,990,611	-				-0.9
2,990,611	-				+0.3
2,990,615	-				-1.7
2,990,620	+				-0.3
2,990,621	-				+0.9
2,990,634	+				+0.4
2,990,634	+				+0.3
2,990,687	+				-0.5
2,990,806	-		Echvi_2519	0.26	-0.9
2,990,835	+		Echvi_2519	0.30	+0.6
2,990,835	+		Echvi_2519	0.30	+0.4
2,990,835	+		Echvi_2519	0.30	+1.3
2,990,836	-		Echvi_2519	0.30	-1.1
2,990,836	-		Echvi_2519	0.30	+0.1
2,990,879	-		Echvi_2519	0.37	+0.3
2,990,883	+		Echvi_2519	0.37	+1.3
2,990,883	+		Echvi_2519	0.37	+0.9
2,990,883	+		Echvi_2519	0.37	-0.5
2,990,884	-		Echvi_2519	0.37	+0.8
2,990,949	+		Echvi_2519	0.47	+0.5
2,990,949	+		Echvi_2519	0.47	+0.6
2,990,950	-		Echvi_2519	0.47	-0.9
2,990,971	+		Echvi_2519	0.50	-0.4
2,991,045	+		Echvi_2519	0.62	-1.9
2,991,100	+		Echvi_2519	0.70	+1.9
2,991,104	+		Echvi_2519	0.70	+1.9
2,991,104	+		Echvi_2519	0.70	-0.4
2,991,105	-		Echvi_2519	0.71	-0.0
2,991,105	-		Echvi_2519	0.71	-0.2
2,991,105	-		Echvi_2519	0.71	+0.3
2,991,112	-		Echvi_2519	0.72	+0.1
2,991,112	-		Echvi_2519	0.72	+0.0
2,991,115	+		Echvi_2519	0.72	-0.0
2,991,415	+				-0.9
2,991,416	-				+0.2
2,991,484	+				+3.9
2,991,485	-		Echvi_2520	0.13	+0.2
2,991,485	-		Echvi_2520	0.13	+0.6
2,991,485	-				-0.1
2,991,595	+		Echvi_2520	0.21	-1.8
2,991,732	+		Echvi_2520	0.32	-3.3
2,991,733	-		Echvi_2520	0.32	-0.9
2,991,840	+		Echvi_2520	0.40	+1.9
2,991,866	-		Echvi_2520	0.42	-0.8
2,991,868	-		Echvi_2520	0.42	+0.2
2,991,868	-		Echvi_2520	0.42	+0.3
2,991,907	+		Echvi_2520	0.45	+0.5
2,991,986	-		Echvi_2520	0.51	-0.1
2,991,986	-		Echvi_2520	0.51	-1.0
2,992,115	-		Echvi_2520	0.61	-0.7
2,992,115	-		Echvi_2520	0.61	-0.1
2,992,186	-		Echvi_2520	0.66	+0.8
2,992,258	-		Echvi_2520	0.71	-0.5
2,992,258	-		Echvi_2520	0.71	+0.6
2,992,288	-		Echvi_2520	0.74	-1.4
2,992,288	-		Echvi_2520	0.74	+0.2
2,992,307	+		Echvi_2520	0.75	+0.7
2,992,341	+		Echvi_2520	0.78	-2.9
2,992,342	-		Echvi_2520	0.78	-0.3
2,992,444	+		Echvi_2520	0.85	+0.0
2,992,444	+		Echvi_2520	0.85	-1.7
2,992,525	-				+0.0
2,992,537	+				+1.6
2,992,552	+				-0.3
2,992,566	+				-0.5
2,992,566	+				+0.9
2,992,566	+				+1.1
2,992,566	+				-0.5
2,992,567	-				+1.4
2,992,567	-				+2.4
2,992,567	-				-0.4
2,992,574	+				-0.6
2,992,583	+				-0.4
2,992,584	-				+0.9
2,992,595	+				+0.1
2,992,606	-				+0.2
2,992,606	-				-0.4
2,992,667	-				-0.6
2,992,708	+				-0.1
2,992,709	-				+0.0
2,992,767	-				+0.1
2,992,767	-				+0.3
2,992,795	+				-1.4
2,992,843	+				-1.1
2,992,859	-				-0.5
2,992,881	+				-0.6
2,992,881	+				-0.6
2,992,882	-				+1.7
2,992,895	-				+0.7
2,992,943	-				+4.1
2,992,980	+				-0.4
2,992,990	+				-0.7
2,992,994	+				+0.8
2,992,994	+				+1.3
2,992,994	+				+0.4
2,992,994	+				-1.2
2,992,995	-				-0.0
2,993,008	-				-0.3
2,993,039	+				-2.5
2,993,051	+				+0.3
2,993,058	+				-1.3
2,993,063	+				+0.7
2,993,090	-				-0.3
2,993,096	-				-0.8
2,993,180	-		Echvi_2521	0.12	+1.4
2,993,180	-		Echvi_2521	0.12	-0.4
2,993,232	-		Echvi_2521	0.16	+0.5
2,993,232	-		Echvi_2521	0.16	+0.4
2,993,232	-		Echvi_2521	0.16	+1.0