Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2418

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
2,866,198	-		Echvi_2416	0.86	-0.3
2,866,235	-				+2.9
2,866,342	-				-0.2
2,866,342	-				-1.0
2,866,414	+				-0.1
2,866,429	-				-1.0
2,866,434	-				-0.8
2,866,434	-				-1.1
2,866,434	-				+0.6
2,866,437	-				+1.2
2,866,521	+				+0.3
2,866,610	-				-0.6
2,866,651	+				+0.2
2,866,651	+				+0.3
2,866,652	-				-1.3
2,866,652	-				-3.0
2,866,729	+		Echvi_2417	0.19	-0.2
2,866,729	+		Echvi_2417	0.19	-0.9
2,866,730	-		Echvi_2417	0.19	+0.9
2,866,749	-		Echvi_2417	0.22	-0.8
2,866,904	-		Echvi_2417	0.47	+1.7
2,866,904	-		Echvi_2417	0.47	-0.2
2,866,926	+		Echvi_2417	0.51	-1.1
2,866,927	-		Echvi_2417	0.51	-0.0
2,866,997	-		Echvi_2417	0.63	-0.9
2,866,997	-		Echvi_2417	0.63	-0.4
2,867,001	+		Echvi_2417	0.63	-1.2
2,867,002	-		Echvi_2417	0.64	-0.7
2,867,075	-		Echvi_2417	0.76	-0.3
2,867,083	-		Echvi_2417	0.77	+1.0
2,867,123	-		Echvi_2417	0.83	-0.3
2,867,123	-		Echvi_2417	0.83	+0.4
2,867,152	+		Echvi_2417	0.88	+0.5
2,867,153	-		Echvi_2417	0.88	+0.9
2,867,204	-				-2.2
2,867,212	+				-2.5
2,867,250	+				-0.1
2,867,270	+				+0.3
2,867,340	+				+0.9
2,867,389	+				+1.5
2,867,399	+				+1.3
2,867,399	+				+0.9
2,867,440	+				+1.4
2,867,587	+		Echvi_2418	0.15	+0.1
2,867,657	-		Echvi_2418	0.17	-0.5
2,867,672	+		Echvi_2418	0.18	-1.2
2,867,685	+		Echvi_2418	0.18	+0.0
2,867,685	+		Echvi_2418	0.18	+1.0
2,867,727	+		Echvi_2418	0.20	+0.9
2,867,727	+		Echvi_2418	0.20	-1.2
2,867,832	-		Echvi_2418	0.24	+0.3
2,867,855	+		Echvi_2418	0.25	+0.4
2,867,856	-		Echvi_2418	0.25	-0.3
2,867,932	+		Echvi_2418	0.28	+0.4
2,868,021	+		Echvi_2418	0.31	+1.0
2,868,068	+		Echvi_2418	0.33	+0.7
2,868,069	-		Echvi_2418	0.33	-1.1
2,868,070	+		Echvi_2418	0.33	+0.5
2,868,070	+		Echvi_2418	0.33	+0.5
2,868,070	+		Echvi_2418	0.33	-0.6
2,868,070	+		Echvi_2418	0.33	+0.5
2,868,070	+		Echvi_2418	0.33	+0.5
2,868,071	-		Echvi_2418	0.33	-0.6
2,868,071	-		Echvi_2418	0.33	+0.8
2,868,071	-		Echvi_2418	0.33	+0.0
2,868,071	-		Echvi_2418	0.33	+0.3
2,868,124	+		Echvi_2418	0.35	-0.3
2,868,124	+		Echvi_2418	0.35	-0.4
2,868,125	-		Echvi_2418	0.35	+0.9
2,868,132	+		Echvi_2418	0.35	+0.2
2,868,238	+		Echvi_2418	0.39	+0.3
2,868,243	-		Echvi_2418	0.39	+1.0
2,868,353	+		Echvi_2418	0.43	-0.1
2,868,353	+		Echvi_2418	0.43	-0.4
2,868,353	+		Echvi_2418	0.43	+0.4
2,868,353	+		Echvi_2418	0.43	-0.4
2,868,353	+		Echvi_2418	0.43	+1.4
2,868,354	-		Echvi_2418	0.43	+0.6
2,868,358	+		Echvi_2418	0.44	+0.3
2,868,359	-		Echvi_2418	0.44	+0.1
2,868,359	-		Echvi_2418	0.44	+0.9
2,868,461	+		Echvi_2418	0.47	-0.1
2,868,461	+		Echvi_2418	0.47	-0.4
2,868,461	+		Echvi_2418	0.47	-0.3
2,868,462	-		Echvi_2418	0.47	-0.1
2,868,483	+		Echvi_2418	0.48	+0.3
2,868,513	+		Echvi_2418	0.49	+0.5
2,868,514	-		Echvi_2418	0.49	+1.5
2,868,514	-		Echvi_2418	0.49	-0.7
2,868,514	-		Echvi_2418	0.49	-0.0
2,868,580	+		Echvi_2418	0.52	-0.1
2,868,609	+		Echvi_2418	0.53	+0.4
2,868,711	+		Echvi_2418	0.57	+0.1
2,868,712	-		Echvi_2418	0.57	+0.6
2,868,731	+		Echvi_2418	0.57	+0.1
2,868,731	+		Echvi_2418	0.57	-0.8
2,868,731	+		Echvi_2418	0.57	+1.2
2,868,732	-		Echvi_2418	0.58	-0.1
2,868,750	+		Echvi_2418	0.58	+0.9
2,868,750	+		Echvi_2418	0.58	+0.2
2,868,751	-		Echvi_2418	0.58	+1.0
2,868,751	-		Echvi_2418	0.58	+0.1
2,868,751	-		Echvi_2418	0.58	+2.4
2,868,751	-		Echvi_2418	0.58	+0.2
2,868,751	-		Echvi_2418	0.58	+0.8
2,868,757	-		Echvi_2418	0.58	+1.5
2,868,757	-		Echvi_2418	0.58	+1.3
2,868,974	-		Echvi_2418	0.67	+0.3
2,869,041	+		Echvi_2418	0.69	-0.0
2,869,041	+		Echvi_2418	0.69	+0.6
2,869,041	+		Echvi_2418	0.69	+1.2
2,869,042	-		Echvi_2418	0.69	+0.3
2,869,042	-		Echvi_2418	0.69	-1.3
2,869,042	-		Echvi_2418	0.69	+1.8
2,869,042	-		Echvi_2418	0.69	-0.2
2,869,103	-		Echvi_2418	0.71	+0.6
2,869,196	-		Echvi_2418	0.75	-0.6
2,869,315	+		Echvi_2418	0.79	-2.1
2,869,353	+		Echvi_2418	0.81	-0.5
2,869,358	+		Echvi_2418	0.81	+1.0
2,869,359	-		Echvi_2418	0.81	+0.9
2,869,360	+		Echvi_2418	0.81	+0.8
2,869,360	+		Echvi_2418	0.81	-1.0
2,869,374	+		Echvi_2418	0.82	-0.1
2,869,375	-		Echvi_2418	0.82	+0.3
2,869,391	+		Echvi_2418	0.82	+0.4
2,869,391	+		Echvi_2418	0.82	-0.0
2,869,491	+		Echvi_2418	0.86	+0.1
2,869,491	+		Echvi_2418	0.86	+0.1
2,869,492	-		Echvi_2418	0.86	+0.0
2,869,492	-		Echvi_2418	0.86	-0.7
2,869,506	+		Echvi_2418	0.86	-0.4
2,869,506	+		Echvi_2418	0.86	-0.6
2,869,506	+		Echvi_2418	0.86	-1.2
2,869,507	-		Echvi_2418	0.86	+0.8
2,869,507	-		Echvi_2418	0.86	+2.2
2,869,529	+		Echvi_2418	0.87	-0.2
2,869,533	+		Echvi_2418	0.87	-0.3
2,869,536	+		Echvi_2418	0.88	-1.3
2,869,536	+		Echvi_2418	0.88	-0.7
2,869,536	+		Echvi_2418	0.88	+2.9
2,869,537	-		Echvi_2418	0.88	+0.9
2,869,540	-		Echvi_2418	0.88	-0.1
2,869,540	-		Echvi_2418	0.88	+1.4
2,869,551	-		Echvi_2418	0.88	-0.1
2,869,642	+				+1.0
2,869,642	+				-1.9
2,869,758	+				+0.4
2,869,844	-				+0.5
2,869,859	+				+0.2
2,869,860	-				-0.3
2,869,860	-				+2.3
2,869,862	-				+0.0
2,869,868	-				+0.3
2,869,908	-				+0.2
2,870,039	-				+0.1
2,870,040	+				+0.9
2,870,040	+				-0.6
2,870,040	+				-0.8
2,870,040	+				-1.0
2,870,041	-				+0.2
2,870,041	-				-0.2
2,870,041	-				-1.1
2,870,041	-				+0.4
2,870,041	-				-1.4
2,870,078	-				-0.1
2,870,108	+				+0.3
2,870,149	+		Echvi_2419	0.11	+1.2
2,870,150	-		Echvi_2419	0.11	+0.3
2,870,150	-		Echvi_2419	0.11	+0.1
2,870,257	-		Echvi_2419	0.21	-0.1
2,870,257	-		Echvi_2419	0.21	-0.8
2,870,370	+		Echvi_2419	0.31	+0.4
2,870,370	+		Echvi_2419	0.31	+1.1
2,870,418	+		Echvi_2419	0.35	-0.8
2,870,516	-		Echvi_2419	0.43	+2.2
2,870,523	+		Echvi_2419	0.44	+0.0
2,870,523	+		Echvi_2419	0.44	+3.2
2,870,523	+		Echvi_2419	0.44	-0.6
2,870,523	+		Echvi_2419	0.44	-2.4
2,870,523	+		Echvi_2419	0.44	-0.5
2,870,523	+		Echvi_2419	0.44	+0.9
2,870,523	+		Echvi_2419	0.44	-0.3
2,870,524	-		Echvi_2419	0.44	-0.9
2,870,527	+		Echvi_2419	0.44	+1.8
2,870,528	-		Echvi_2419	0.44	-2.0
2,870,565	-		Echvi_2419	0.48	-1.7
2,870,637	-		Echvi_2419	0.54	-0.1
2,870,748	+		Echvi_2419	0.64	-1.1
2,870,748	+		Echvi_2419	0.64	-2.0
2,870,799	+		Echvi_2419	0.68	-0.3
2,870,799	+		Echvi_2419	0.68	+0.8
2,870,799	+		Echvi_2419	0.68	+1.1
2,870,799	+		Echvi_2419	0.68	+0.0
2,870,799	+		Echvi_2419	0.68	-2.5
2,870,799	+		Echvi_2419	0.68	+0.1
2,870,800	-		Echvi_2419	0.68	+0.2
2,870,800	-		Echvi_2419	0.68	+0.4
2,870,800	-		Echvi_2419	0.68	+0.6
2,870,800	-		Echvi_2419	0.68	+0.4
2,870,800	-		Echvi_2419	0.68	-0.1
2,870,800	-		Echvi_2419	0.68	+1.5
2,870,801	+		Echvi_2419	0.69	-0.3
2,870,801	+		Echvi_2419	0.69	-0.4
2,870,803	+		Echvi_2419	0.69	-0.3