Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2318

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
2,752,576	+				+0.9
2,752,577	-				-0.6
2,752,596	-				-0.1
2,752,603	-				-0.9
2,752,607	-				-0.7
2,752,625	-				-0.7
2,752,635	-				+0.0
2,752,641	+				-0.4
2,752,642	-				+0.4
2,752,642	-				-0.7
2,752,642	-				-0.5
2,752,654	-				+1.1
2,752,665	+				-0.4
2,752,685	+				-0.6
2,752,776	-				+1.6
2,752,776	-				-0.0
2,752,783	+				+0.2
2,752,784	-				-0.4
2,752,864	+				+0.4
2,752,864	+				+1.2
2,752,911	+				-0.4
2,753,070	+				-0.1
2,753,070	+				+0.9
2,753,198	+				+2.9
2,753,251	+				+0.2
2,753,252	-				+0.6
2,753,256	+				-0.2
2,753,256	+				+0.5
2,753,293	+				+0.3
2,753,294	-				-0.3
2,753,302	+				-0.6
2,753,302	+				-0.4
2,753,303	-				+0.4
2,753,303	-				-1.1
2,753,361	+				+0.5
2,753,365	+				-2.9
2,753,366	-				-0.0
2,753,444	+				-0.4
2,753,445	-				+1.9
2,753,445	-				-1.1
2,753,470	+				-1.1
2,753,605	-				-1.4
2,753,632	+				-0.0
2,753,632	+				-1.9
2,753,632	+				-1.4
2,753,632	+				-2.1
2,753,633	-				-1.7
2,753,633	-				-0.2
2,753,633	-				-1.8
2,753,633	-				-1.3
2,753,633	-				-1.8
2,753,801	-		Echvi_2318	0.18	-1.2
2,753,876	+		Echvi_2318	0.22	-2.2
2,753,883	+		Echvi_2318	0.23	-0.1
2,753,944	-		Echvi_2318	0.27	-1.8
2,753,980	-		Echvi_2318	0.29	-0.4
2,753,998	-		Echvi_2318	0.30	-0.4
2,754,102	-		Echvi_2318	0.37	-1.0
2,754,154	-		Echvi_2318	0.40	-1.0
2,754,250	-		Echvi_2318	0.46	-1.2
2,754,352	-		Echvi_2318	0.53	-0.8
2,754,359	-		Echvi_2318	0.53	-1.3
2,754,374	+		Echvi_2318	0.54	-1.5
2,754,375	-		Echvi_2318	0.54	+0.0
2,754,375	-		Echvi_2318	0.54	+1.1
2,754,403	+		Echvi_2318	0.56	-2.5
2,754,404	-		Echvi_2318	0.56	-0.9
2,754,406	-		Echvi_2318	0.56	-0.8
2,754,432	-		Echvi_2318	0.58	-0.2
2,754,539	-		Echvi_2318	0.65	-1.6
2,754,539	-		Echvi_2318	0.65	-1.6
2,754,594	-		Echvi_2318	0.68	-0.2
2,754,664	-		Echvi_2318	0.73	-0.9
2,754,668	+		Echvi_2318	0.73	-1.4
2,754,671	+		Echvi_2318	0.73	-1.4
2,754,671	+		Echvi_2318	0.73	-1.4
2,754,704	+		Echvi_2318	0.75	-0.2
2,754,704	+		Echvi_2318	0.75	-1.4
2,754,704	+		Echvi_2318	0.75	-0.5
2,754,705	-		Echvi_2318	0.75	-1.1
2,754,705	-		Echvi_2318	0.75	+0.6
2,754,705	-		Echvi_2318	0.75	-2.2
2,754,707	+		Echvi_2318	0.75	-0.1
2,754,803	+		Echvi_2318	0.82	-1.2
2,754,841	-		Echvi_2318	0.84	-1.2
2,754,873	+		Echvi_2318	0.86	-1.2
2,754,873	+		Echvi_2318	0.86	-1.4
2,754,873	+		Echvi_2318	0.86	-1.2
2,754,873	+		Echvi_2318	0.86	+0.0
2,754,874	-		Echvi_2318	0.86	-1.1
2,754,874	-		Echvi_2318	0.86	-2.5
2,754,874	-		Echvi_2318	0.86	-0.9
2,754,896	+		Echvi_2318	0.88	+0.7
2,754,952	+				-0.7
2,755,063	+				-0.3
2,755,064	-				-1.1
2,755,078	+				-1.5
2,755,096	-				-2.5
2,755,109	-				+0.9
2,755,154	+				+1.5
2,755,187	-		Echvi_2319	0.12	+0.5
2,755,197	+		Echvi_2319	0.14	-1.6
2,755,216	+		Echvi_2319	0.16	+0.0
2,755,219	+		Echvi_2319	0.16	-0.2
2,755,226	-		Echvi_2319	0.17	-0.1
2,755,286	+		Echvi_2319	0.25	+1.3
2,755,286	+		Echvi_2319	0.25	+0.3
2,755,287	-		Echvi_2319	0.25	-0.8
2,755,287	-		Echvi_2319	0.25	+0.2
2,755,339	-		Echvi_2319	0.32	+0.3
2,755,339	-		Echvi_2319	0.32	+1.0
2,755,357	-		Echvi_2319	0.35	-0.3
2,755,372	+		Echvi_2319	0.36	-0.3
2,755,372	+		Echvi_2319	0.36	-0.3
2,755,385	+		Echvi_2319	0.38	+0.0
2,755,396	+		Echvi_2319	0.40	-1.7
2,755,397	-		Echvi_2319	0.40	+0.5
2,755,397	-		Echvi_2319	0.40	+0.9
2,755,398	+		Echvi_2319	0.40	-0.7
2,755,398	+		Echvi_2319	0.40	-0.8
2,755,399	-		Echvi_2319	0.40	+0.7
2,755,399	-		Echvi_2319	0.40	+0.1
2,755,399	-		Echvi_2319	0.40	+0.1
2,755,399	-		Echvi_2319	0.40	-0.9
2,755,433	+		Echvi_2319	0.44	+0.7
2,755,433	+		Echvi_2319	0.44	+0.4
2,755,433	+		Echvi_2319	0.44	-0.4
2,755,434	-		Echvi_2319	0.45	-0.6
2,755,472	+		Echvi_2319	0.50	+0.5
2,755,473	-		Echvi_2319	0.50	+0.8
2,755,473	-		Echvi_2319	0.50	-0.9
2,755,508	+		Echvi_2319	0.54	-0.5
2,755,509	-		Echvi_2319	0.54	-0.6
2,755,512	+		Echvi_2319	0.55	+0.9
2,755,512	+		Echvi_2319	0.55	-0.3
2,755,512	+		Echvi_2319	0.55	+1.0
2,755,513	-		Echvi_2319	0.55	-0.4
2,755,513	-		Echvi_2319	0.55	+0.8
2,755,513	-		Echvi_2319	0.55	+1.0
2,755,519	-		Echvi_2319	0.56	+0.1
2,755,557	+		Echvi_2319	0.61	-1.4
2,755,557	+		Echvi_2319	0.61	+1.2
2,755,627	+		Echvi_2319	0.70	-0.3
2,755,627	+		Echvi_2319	0.70	-0.4
2,755,628	-		Echvi_2319	0.70	+1.0
2,755,628	-		Echvi_2319	0.70	-0.4
2,755,641	+		Echvi_2319	0.72	-0.9
2,755,642	-		Echvi_2319	0.72	+0.5
2,755,649	-		Echvi_2319	0.73	+0.6
2,755,649	-		Echvi_2319	0.73	+0.2
2,755,649	-		Echvi_2319	0.73	-0.8
2,755,753	+		Echvi_2319	0.86	-0.4
2,755,838	+				+0.9
2,755,920	-				-0.3
2,755,920	-				-1.4
2,755,920	-				-0.5
2,755,933	-				+0.3
2,755,999	-		Echvi_2320	0.13	+2.3
2,756,066	+		Echvi_2320	0.37	-0.3