Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2306

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
2,738,985	+		Echvi_2305	0.62	-1.0
2,738,986	-		Echvi_2305	0.62	+0.2
2,739,060	+		Echvi_2305	0.66	+0.7
2,739,061	-		Echvi_2305	0.66	+1.3
2,739,061	-		Echvi_2305	0.66	+0.1
2,739,066	+		Echvi_2305	0.66	-1.8
2,739,066	+		Echvi_2305	0.66	+1.2
2,739,066	+		Echvi_2305	0.66	-0.2
2,739,067	-		Echvi_2305	0.66	-0.5
2,739,069	-		Echvi_2305	0.66	-1.0
2,739,069	-		Echvi_2305	0.66	-0.3
2,739,170	+		Echvi_2305	0.71	-0.4
2,739,312	+		Echvi_2305	0.78	+1.9
2,739,312	+		Echvi_2305	0.78	+1.9
2,739,313	-		Echvi_2305	0.78	-1.0
2,739,313	-		Echvi_2305	0.78	-0.4
2,739,313	-		Echvi_2305	0.78	-0.2
2,739,315	+		Echvi_2305	0.78	-0.1
2,739,316	-		Echvi_2305	0.78	-0.3
2,739,316	-		Echvi_2305	0.78	+0.1
2,739,317	+		Echvi_2305	0.78	+1.1
2,739,317	+		Echvi_2305	0.78	+0.4
2,739,317	+		Echvi_2305	0.78	+0.9
2,739,369	-		Echvi_2305	0.80	+0.6
2,739,398	+		Echvi_2305	0.82	+0.8
2,739,398	+		Echvi_2305	0.82	-2.2
2,739,398	+		Echvi_2305	0.82	+0.1
2,739,398	+		Echvi_2305	0.82	-0.1
2,739,418	+		Echvi_2305	0.83	-1.1
2,739,455	-		Echvi_2305	0.85	+0.1
2,739,515	+		Echvi_2305	0.87	-0.4
2,739,515	+		Echvi_2305	0.87	-1.0
2,739,515	+		Echvi_2305	0.87	+0.6
2,739,516	-		Echvi_2305	0.88	+1.9
2,739,519	-		Echvi_2305	0.88	+0.6
2,739,519	-		Echvi_2305	0.88	+0.9
2,739,519	-		Echvi_2305	0.88	+0.0
2,739,521	+		Echvi_2305	0.88	-1.3
2,739,628	+				+0.3
2,739,628	+				-0.1
2,739,629	-				-0.4
2,739,692	+				+0.6
2,739,695	+				-0.8
2,739,696	-				+0.3
2,739,711	+				-0.9
2,739,711	+				+0.1
2,739,722	+				+0.0
2,739,723	-				-0.2
2,739,737	-				+1.1
2,739,741	+				-0.4
2,739,766	-				-0.0
2,739,775	-				+0.9
2,739,831	-				-0.8
2,739,956	+				+0.5
2,740,025	+		Echvi_2306	0.15	+1.5
2,740,097	+		Echvi_2306	0.32	+0.3
2,740,198	-		Echvi_2306	0.56	+0.5
2,740,201	+		Echvi_2306	0.57	+0.2
2,740,201	+		Echvi_2306	0.57	-0.9
2,740,219	-		Echvi_2306	0.61	-1.1
2,740,308	+		Echvi_2306	0.82	-0.1
2,740,308	+		Echvi_2306	0.82	-0.7
2,740,308	+		Echvi_2306	0.82	-0.1
2,740,309	-		Echvi_2306	0.83	+0.4
2,740,309	-		Echvi_2306	0.83	-0.9
2,740,309	-		Echvi_2306	0.83	+1.4
2,740,309	-		Echvi_2306	0.83	+0.3
2,740,356	-				-1.3
2,740,378	+				-0.8
2,740,379	-				-0.6
2,740,387	-				+0.3
2,740,387	-				+0.9
2,740,390	+				-0.3
2,740,413	+				-1.2
2,740,446	+				+0.0
2,740,446	+				-0.5
2,740,593	+				-2.0
2,740,594	-				-1.1
2,740,610	+				-0.8
2,740,637	+				+0.0
2,740,637	+				-1.4
2,740,649	-				+0.8
2,740,649	-				+0.5
2,740,651	+				-1.5
2,740,651	+				-1.4
2,740,651	+				-0.4
2,740,651	+				+0.8
2,740,651	+				+0.0
2,740,652	-				-0.4
2,740,696	+		Echvi_2307	0.11	+0.6
2,740,697	-		Echvi_2307	0.11	-0.1
2,740,729	-		Echvi_2307	0.13	+0.8
2,740,790	+		Echvi_2307	0.16	+2.3
2,740,790	+		Echvi_2307	0.16	-0.8
2,740,792	+		Echvi_2307	0.16	-0.4
2,740,793	-		Echvi_2307	0.16	-0.0
2,740,799	+		Echvi_2307	0.16	-0.6
2,740,892	-		Echvi_2307	0.21	+0.1
2,740,921	+		Echvi_2307	0.22	-2.0
2,740,925	+		Echvi_2307	0.22	-0.7
2,740,925	+		Echvi_2307	0.22	-2.5
2,740,926	-		Echvi_2307	0.22	+0.9
2,740,988	-		Echvi_2307	0.25	-0.1
2,741,012	+		Echvi_2307	0.26	+0.6
2,741,012	+		Echvi_2307	0.26	+0.9
2,741,013	-		Echvi_2307	0.26	-0.2
2,741,014	+		Echvi_2307	0.26	-0.2
2,741,014	+		Echvi_2307	0.26	-0.1
2,741,015	-		Echvi_2307	0.27	+0.6
2,741,015	-		Echvi_2307	0.27	-1.9
2,741,015	-		Echvi_2307	0.27	-0.6
2,741,056	+		Echvi_2307	0.28	-1.0
2,741,057	-		Echvi_2307	0.29	+1.2
2,741,057	-		Echvi_2307	0.29	-0.3
2,741,058	+		Echvi_2307	0.29	-0.1
2,741,058	+		Echvi_2307	0.29	-0.7
2,741,059	-		Echvi_2307	0.29	-1.3
2,741,095	+		Echvi_2307	0.30	+0.2
2,741,095	+		Echvi_2307	0.30	-1.1
2,741,095	+		Echvi_2307	0.30	-0.5
2,741,096	-		Echvi_2307	0.30	-1.3
2,741,096	-		Echvi_2307	0.30	-2.7
2,741,131	+		Echvi_2307	0.32	-1.1
2,741,132	-		Echvi_2307	0.32	+0.6
2,741,136	+		Echvi_2307	0.32	-1.6
2,741,146	+		Echvi_2307	0.33	+1.9
2,741,146	+		Echvi_2307	0.33	+0.8
2,741,284	+		Echvi_2307	0.39	-1.5
2,741,285	-		Echvi_2307	0.39	-0.5
2,741,348	-		Echvi_2307	0.43	+0.1
2,741,356	+		Echvi_2307	0.43	+1.3
2,741,357	-		Echvi_2307	0.43	-1.6
2,741,357	-		Echvi_2307	0.43	+0.1
2,741,357	-		Echvi_2307	0.43	-0.2