Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2301

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
2,727,132	+		Echvi_2300	0.76	-1.1
2,727,133	-		Echvi_2300	0.76	+0.2
2,727,146	+		Echvi_2300	0.76	-0.7
2,727,147	-		Echvi_2300	0.76	+0.5
2,727,281	+		Echvi_2300	0.80	-0.6
2,727,281	+		Echvi_2300	0.80	+0.5
2,727,374	-		Echvi_2300	0.82	-1.6
2,727,494	+		Echvi_2300	0.85	-1.6
2,727,568	+		Echvi_2300	0.87	-0.2
2,727,660	+		Echvi_2300	0.89	+0.7
2,727,661	-		Echvi_2300	0.89	+0.2
2,727,791	+				+0.1
2,727,792	-				-0.4
2,727,796	-				+0.8
2,728,017	-				+0.2
2,728,025	-				-0.1
2,728,025	-				+0.6
2,728,065	+				-0.8
2,728,065	+				+0.1
2,728,070	+				-0.9
2,728,070	+				-0.5
2,728,072	+				-0.1
2,728,073	-				-0.6
2,728,091	+				-2.3
2,728,092	-				-1.4
2,728,095	-				-0.1
2,728,113	-				-0.5
2,728,354	-				-2.0
2,728,377	+				-0.8
2,728,400	+				-1.9
2,728,400	+				-0.6
2,728,401	-				-2.0
2,728,401	-				+1.1
2,728,401	-				-0.4
2,728,401	-				+0.3
2,728,401	-				-0.3
2,728,465	-				-0.2
2,728,503	-				-0.3
2,728,606	-				-1.0
2,728,607	+				+0.9
2,728,629	+				-0.1
2,728,630	-				+0.5
2,728,670	+				-0.3
2,728,681	+				+0.5
2,728,681	+				-0.3
2,728,796	+		Echvi_2301	0.10	+1.2
2,729,147	+		Echvi_2301	0.16	+0.6
2,729,148	-		Echvi_2301	0.16	+0.9
2,729,148	-		Echvi_2301	0.16	+0.6
2,729,148	-		Echvi_2301	0.16	+0.7
2,729,380	+		Echvi_2301	0.19	-0.3
2,729,381	-		Echvi_2301	0.19	-0.4
2,729,381	-		Echvi_2301	0.19	-0.7
2,729,415	-		Echvi_2301	0.20	-0.8
2,729,415	-		Echvi_2301	0.20	+1.4
2,729,552	+		Echvi_2301	0.22	+1.5
2,729,552	+		Echvi_2301	0.22	+1.5
2,729,553	-		Echvi_2301	0.22	-1.7
2,729,553	-		Echvi_2301	0.22	-0.2
2,729,815	+		Echvi_2301	0.26	-0.5
2,729,894	+		Echvi_2301	0.27	-0.4
2,729,895	-		Echvi_2301	0.27	-2.0
2,729,895	-		Echvi_2301	0.27	+1.3
2,729,895	-		Echvi_2301	0.27	+2.4
2,729,895	-		Echvi_2301	0.27	+1.4
2,729,899	-		Echvi_2301	0.27	-0.3
2,729,899	-		Echvi_2301	0.27	-0.2
2,729,899	-		Echvi_2301	0.27	+0.4
2,729,899	-		Echvi_2301	0.27	-2.2
2,729,899	-		Echvi_2301	0.27	+0.1
2,729,899	-		Echvi_2301	0.27	-2.6
2,730,054	+		Echvi_2301	0.29	+1.7
2,730,054	+		Echvi_2301	0.29	-1.2
2,730,055	-		Echvi_2301	0.29	-0.6
2,730,107	-		Echvi_2301	0.30	+0.7
2,730,244	-		Echvi_2301	0.32	+0.0
2,730,319	+		Echvi_2301	0.33	-0.6
2,730,320	-		Echvi_2301	0.33	+0.5
2,730,389	+		Echvi_2301	0.34	-1.7
2,730,487	-		Echvi_2301	0.36	+1.0
2,730,532	-		Echvi_2301	0.36	-1.6
2,730,540	+		Echvi_2301	0.37	-0.7
2,730,573	+		Echvi_2301	0.37	-0.2
2,730,596	-		Echvi_2301	0.37	+0.5
2,730,699	+		Echvi_2301	0.39	-0.6
2,730,883	+		Echvi_2301	0.42	-0.7
2,730,889	+		Echvi_2301	0.42	-0.5
2,730,890	-		Echvi_2301	0.42	-0.4
2,730,890	-		Echvi_2301	0.42	+1.4
2,730,890	-		Echvi_2301	0.42	+1.1
2,730,890	-		Echvi_2301	0.42	-0.7
2,730,949	-		Echvi_2301	0.43	+0.7
2,730,949	-		Echvi_2301	0.43	-1.4
2,731,049	-		Echvi_2301	0.44	+2.9
2,731,145	+		Echvi_2301	0.46	-0.2
2,731,145	+		Echvi_2301	0.46	-0.9
2,731,145	+		Echvi_2301	0.46	-0.4
2,731,146	-		Echvi_2301	0.46	+2.9
2,731,146	-		Echvi_2301	0.46	+1.1
2,731,146	-		Echvi_2301	0.46	-1.2
2,731,146	-		Echvi_2301	0.46	-0.6
2,731,183	-		Echvi_2301	0.46	+1.4
2,731,340	+		Echvi_2301	0.49	-0.6
2,731,369	+		Echvi_2301	0.49	+0.0
2,731,370	-		Echvi_2301	0.49	-0.4
2,731,370	-		Echvi_2301	0.49	+0.1
2,731,384	+		Echvi_2301	0.49	+0.1
2,731,414	-		Echvi_2301	0.50	-0.1
2,731,414	-		Echvi_2301	0.50	+0.9
2,731,473	-		Echvi_2301	0.51	-0.9
2,731,479	+		Echvi_2301	0.51	+0.2
2,731,480	-		Echvi_2301	0.51	-1.0
2,731,515	-		Echvi_2301	0.51	+0.4
2,731,515	-		Echvi_2301	0.51	-0.1
2,731,570	-		Echvi_2301	0.52	+0.2
2,731,578	-		Echvi_2301	0.52	+0.3
2,731,675	+		Echvi_2301	0.54	-0.9
2,731,693	-		Echvi_2301	0.54	-0.7
2,731,807	+		Echvi_2301	0.56	+0.4
2,731,823	-		Echvi_2301	0.56	+0.5
2,731,847	+		Echvi_2301	0.56	-0.0
2,731,847	+		Echvi_2301	0.56	-0.9
2,731,848	-		Echvi_2301	0.56	+0.6
2,731,870	-		Echvi_2301	0.57	+0.9
2,732,031	-		Echvi_2301	0.59	-1.3
2,732,031	-		Echvi_2301	0.59	+1.5
2,732,163	+		Echvi_2301	0.61	-0.6
2,732,163	+		Echvi_2301	0.61	+0.0
2,732,168	+		Echvi_2301	0.61	-0.3
2,732,168	+		Echvi_2301	0.61	-0.7
2,732,169	-		Echvi_2301	0.61	-1.4
2,732,169	-		Echvi_2301	0.61	+0.3
2,732,169	-		Echvi_2301	0.61	-2.0
2,732,422	-		Echvi_2301	0.65	+1.7
2,732,436	-		Echvi_2301	0.65	+0.1
2,732,442	+		Echvi_2301	0.65	-0.1
2,732,490	+		Echvi_2301	0.66	+0.4
2,732,490	+		Echvi_2301	0.66	-1.6
2,732,491	-		Echvi_2301	0.66	+0.2
2,732,493	-		Echvi_2301	0.66	-0.3
2,732,558	-		Echvi_2301	0.67	-0.2
2,732,577	-		Echvi_2301	0.67	-0.6
2,732,777	-		Echvi_2301	0.70	+0.6
2,732,777	-		Echvi_2301	0.70	+0.8
2,732,796	+		Echvi_2301	0.71	-0.8
2,732,923	+		Echvi_2301	0.72	-1.1
2,733,036	-		Echvi_2301	0.74	+0.4
2,733,076	+		Echvi_2301	0.75	-1.7
2,733,076	+		Echvi_2301	0.75	+0.8
2,733,077	-		Echvi_2301	0.75	+0.5
2,733,077	-		Echvi_2301	0.75	+1.0
2,733,151	-		Echvi_2301	0.76	+0.1
2,733,215	-		Echvi_2301	0.77	+2.9
2,733,215	-		Echvi_2301	0.77	+0.9
2,733,335	+		Echvi_2301	0.79	+1.0
2,733,335	+		Echvi_2301	0.79	+2.3
2,733,335	+		Echvi_2301	0.79	-0.3
2,733,335	+		Echvi_2301	0.79	+0.7
2,733,406	-		Echvi_2301	0.80	-1.5
2,733,407	+		Echvi_2301	0.80	-0.2
2,733,407	+		Echvi_2301	0.80	+0.5
2,733,408	-		Echvi_2301	0.80	+0.3
2,733,410	+		Echvi_2301	0.80	-0.7
2,733,410	+		Echvi_2301	0.80	-0.9
2,733,411	-		Echvi_2301	0.80	-0.1
2,733,467	+		Echvi_2301	0.81	-1.2
2,733,467	+		Echvi_2301	0.81	-0.6
2,733,484	-		Echvi_2301	0.81	-0.9
2,733,616	+		Echvi_2301	0.83	+0.5
2,733,717	-		Echvi_2301	0.84	+0.5
2,733,717	-		Echvi_2301	0.84	+1.0
2,733,717	-		Echvi_2301	0.84	+0.4
2,733,771	-		Echvi_2301	0.85	+1.9
2,733,773	-		Echvi_2301	0.85	-1.7
2,733,809	-		Echvi_2301	0.86	+0.9
2,733,881	+		Echvi_2301	0.87	+0.6
2,733,881	+		Echvi_2301	0.87	-0.4
2,733,967	+		Echvi_2301	0.88	+0.1
2,733,989	+		Echvi_2301	0.88	+1.4
2,734,012	-		Echvi_2301	0.89	+0.3
2,734,012	-		Echvi_2301	0.89	-0.3
2,734,027	+		Echvi_2301	0.89	+1.3
2,734,027	+		Echvi_2301	0.89	+1.5
2,734,033	-		Echvi_2301	0.89	-0.6
2,734,171	+				+1.0
2,734,204	-				-0.2
2,734,288	-				-0.2
2,734,322	+				-1.1
2,734,382	-				-0.0
2,734,382	-				+0.1
2,734,488	+				-0.6
2,734,488	+				-0.9
2,734,540	+				-0.5
2,734,550	-				-0.8
2,734,625	-				-0.1
2,734,675	+				+0.3
2,734,734	+				-0.4
2,734,735	-				+0.3
2,734,764	+				+1.1
2,734,765	-				-0.9
2,734,765	-				-0.1
2,734,765	-				-0.3
2,734,778	+				+0.2
2,734,778	+				-0.7
2,734,778	+				+0.3
2,734,778	+				-0.8
2,734,779	-				+0.9
2,734,779	-				-0.5
2,734,779	-				+1.9
2,734,779	-				+0.6
2,734,779	-				+0.0
2,734,783	-				+0.3
2,734,783	-				-0.2
2,734,783	-				-0.1
2,734,787	-				+0.5
2,734,951	-				-0.6
2,734,952	+				-0.5
2,734,952	+				+2.5
2,734,952	+				+0.4
2,734,954	+				-0.1
2,734,954	+				+0.5
2,734,954	+				-0.1
2,734,954	+				+0.6
2,734,956	+				+0.7
2,734,961	+				-0.8
2,735,066	-		Echvi_2302	0.34	+1.1
2,735,066	-		Echvi_2302	0.34	+0.0
2,735,077	-		Echvi_2302	0.40	-1.8
2,735,148	+		Echvi_2302	0.77	+0.6
2,735,148	+		Echvi_2302	0.77	-0.8
2,735,189	-				-0.3
2,735,189	-				+0.1
2,735,197	-				-0.3
2,735,204	-				+0.1
2,735,287	+				-1.6
2,735,290	-				+0.7
2,735,290	-				-1.3
2,735,293	+				+1.3
2,735,327	+				-0.2
2,735,327	+				-0.2
2,735,328	-				+0.6
2,735,342	+				+1.3
2,735,342	+				-0.9
2,735,425	+				+0.2
2,735,426	-				-0.1
2,735,427	+				+0.1
2,735,428	-				-0.5
2,735,428	-				+0.6
2,735,467	+				+0.1
2,735,511	+		Echvi_2303	0.13	+0.9
2,735,511	+		Echvi_2303	0.13	-1.3
2,735,518	-		Echvi_2303	0.13	+0.7
2,735,525	-		Echvi_2303	0.14	-0.3
2,735,554	+		Echvi_2303	0.16	+1.1
2,735,555	-		Echvi_2303	0.16	+2.6
2,735,555	-		Echvi_2303	0.16	+1.4
2,735,556	+		Echvi_2303	0.16	-0.6
2,735,556	+		Echvi_2303	0.16	+0.8
2,735,556	+		Echvi_2303	0.16	-1.3
2,735,556	+		Echvi_2303	0.16	-0.1
2,735,556	+		Echvi_2303	0.16	+0.5
2,735,556	+		Echvi_2303	0.16	-0.6
2,735,557	-		Echvi_2303	0.16	+1.9
2,735,557	-		Echvi_2303	0.16	+0.8
2,735,557	-		Echvi_2303	0.16	-0.6
2,735,635	-		Echvi_2303	0.21	-1.0
2,735,638	-		Echvi_2303	0.21	+0.2
2,735,638	-		Echvi_2303	0.21	-0.0
2,735,638	-		Echvi_2303	0.21	+0.1
2,735,638	-		Echvi_2303	0.21	-0.7
2,735,638	-		Echvi_2303	0.21	-1.1
2,735,668	-		Echvi_2303	0.23	-1.9
2,735,668	-		Echvi_2303	0.23	+0.1
2,735,668	-		Echvi_2303	0.23	+1.4
2,735,671	-		Echvi_2303	0.24	+0.2
2,735,722	+		Echvi_2303	0.27	-0.1