Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2292

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
2,714,176	+				+0.3
2,714,176	+				-1.9
2,714,187	+				+0.7
2,714,188	-				+0.3
2,714,343	+		Echvi_2291	0.24	-0.3
2,714,432	+		Echvi_2291	0.35	+0.6
2,714,508	+		Echvi_2291	0.44	-0.5
2,714,529	+		Echvi_2291	0.47	-1.1
2,714,610	+		Echvi_2291	0.56	-0.8
2,714,665	+		Echvi_2291	0.63	-0.8
2,714,665	+		Echvi_2291	0.63	-0.6
2,714,698	+		Echvi_2291	0.67	-0.1
2,714,698	+		Echvi_2291	0.67	-1.4
2,714,699	-		Echvi_2291	0.67	+2.3
2,714,780	-		Echvi_2291	0.77	+0.4
2,714,791	-		Echvi_2291	0.79	-1.3
2,714,816	+		Echvi_2291	0.82	-1.4
2,714,843	+		Echvi_2291	0.85	-1.1
2,714,856	-		Echvi_2291	0.87	-0.4
2,714,947	-				-2.6
2,714,976	-				-0.4
2,714,979	-				+0.0
2,714,979	-				-0.2
2,714,983	+				-1.6
2,714,988	+				+0.3
2,714,989	-				-0.1
2,714,992	-				+0.9
2,714,995	+				-0.0
2,714,995	+				+2.3
2,714,996	-				-1.3
2,715,011	+				-2.3
2,715,141	-				+2.6
2,715,141	-				+0.2
2,715,143	-				-0.2
2,715,143	-				+0.4
2,715,203	+				-0.4
2,715,228	+		Echvi_2292	0.13	-1.7
2,715,298	+		Echvi_2292	0.22	+2.1
2,715,299	-		Echvi_2292	0.22	-0.4
2,715,336	+		Echvi_2292	0.26	+0.4
2,715,336	+		Echvi_2292	0.26	-2.5
2,715,397	-		Echvi_2292	0.34	+0.3
2,715,404	-		Echvi_2292	0.35	+0.6
2,715,404	-		Echvi_2292	0.35	+0.9
2,715,404	-		Echvi_2292	0.35	+0.4
2,715,404	-		Echvi_2292	0.35	+2.9
2,715,581	-		Echvi_2292	0.57	-0.4
2,715,602	+		Echvi_2292	0.60	-0.1
2,715,603	-		Echvi_2292	0.60	+0.5
2,715,603	-		Echvi_2292	0.60	+0.2
2,715,612	-		Echvi_2292	0.61	+1.0
2,715,612	-		Echvi_2292	0.61	-1.2
2,715,617	-		Echvi_2292	0.61	-0.7
2,715,897	-				-0.3
2,715,929	-				-0.7
2,715,929	-				+0.0
2,715,936	+				-0.8
2,715,937	-				-0.9
2,715,937	-				+1.2
2,715,961	+				-0.1
2,715,962	-				+0.9
2,715,984	-				-0.6
2,715,986	+				-1.4
2,715,987	-				-1.7
2,715,987	-				+0.2
2,715,989	+				-2.1
2,715,989	+				-0.6
2,715,990	-				+0.2
2,715,990	-				+0.4
2,716,010	-				-0.0
2,716,020	+				-0.4
2,716,021	-				-0.1
2,716,028	-				+1.5
2,716,029	+				-1.3
2,716,048	+				-0.9
2,716,050	+				+0.1
2,716,054	+				-0.8
2,716,055	-				+1.3
2,716,055	-				-1.1
2,716,061	+				+1.2
2,716,084	+				-0.4
2,716,085	-				-0.4
2,716,114	+				-0.6
2,716,115	-				-0.2
2,716,115	-				+0.9
2,716,115	-				+1.0
2,716,171	+				+0.1
2,716,171	+				+1.9
2,716,172	-				-2.3
2,716,172	-				+0.5
2,716,472	+		Echvi_2293	0.29	+1.0
2,716,473	-		Echvi_2293	0.29	+0.4
2,716,473	-		Echvi_2293	0.29	-1.7
2,716,476	+		Echvi_2293	0.29	-0.6
2,716,478	+		Echvi_2293	0.29	+0.9
2,716,479	-		Echvi_2293	0.29	+0.6
2,716,479	-		Echvi_2293	0.29	-0.6
2,716,554	-		Echvi_2293	0.34	+0.5
2,716,554	-		Echvi_2293	0.34	+0.3
2,716,556	-		Echvi_2293	0.34	-1.0
2,716,573	-		Echvi_2293	0.36	-0.9
2,716,573	-		Echvi_2293	0.36	-0.9
2,716,607	-		Echvi_2293	0.38	-0.1
2,716,645	-		Echvi_2293	0.41	-0.5
2,716,645	-		Echvi_2293	0.41	+1.2
2,716,693	+		Echvi_2293	0.44	-0.4
2,716,801	+		Echvi_2293	0.52	-1.1
2,716,801	+		Echvi_2293	0.52	-0.3
2,716,801	+		Echvi_2293	0.52	+0.5
2,716,802	-		Echvi_2293	0.52	+0.9