Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2285

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
2,705,994	-		Echvi_2283	0.47	-0.7
2,705,995	+		Echvi_2283	0.47	+0.0
2,705,996	-		Echvi_2283	0.47	-0.5
2,706,052	+		Echvi_2283	0.52	+0.2
2,706,052	+		Echvi_2283	0.52	+0.5
2,706,052	+		Echvi_2283	0.52	-0.4
2,706,053	-		Echvi_2283	0.52	+0.5
2,706,230	-		Echvi_2283	0.67	+0.9
2,706,230	-		Echvi_2283	0.67	-0.4
2,706,233	+		Echvi_2283	0.68	+0.2
2,706,234	-		Echvi_2283	0.68	-0.9
2,706,239	+		Echvi_2283	0.68	+1.9
2,706,239	+		Echvi_2283	0.68	+0.6
2,706,240	-		Echvi_2283	0.68	+0.3
2,706,311	+		Echvi_2283	0.74	+0.9
2,706,532	+				-0.8
2,706,532	+				+0.1
2,706,533	-				+0.3
2,706,533	-				+0.2
2,706,617	+				+0.6
2,706,617	+				-1.1
2,706,618	-		Echvi_2284	0.10	-0.1
2,706,621	+		Echvi_2284	0.13	-0.2
2,706,621	+		Echvi_2284	0.13	-0.1
2,706,622	-		Echvi_2284	0.13	-0.7
2,706,622	-		Echvi_2284	0.13	+1.6
2,706,622	-		Echvi_2284	0.13	+1.2
2,706,680	+		Echvi_2284	0.56	+1.9
2,706,746	-				-2.1
2,706,752	+				+3.3
2,706,877	+				+1.9
2,706,906	-				-2.0
2,707,014	+		Echvi_2285	0.12	+0.2
2,707,070	-		Echvi_2285	0.20	+0.6
2,707,096	+		Echvi_2285	0.24	-0.3
2,707,096	+		Echvi_2285	0.24	-2.1
2,707,096	+		Echvi_2285	0.24	-2.6
2,707,096	+				+1.9
2,707,096	+		Echvi_2285	0.24	-1.2
2,707,096	+		Echvi_2285	0.24	-0.2
2,707,097	-		Echvi_2285	0.24	-1.6
2,707,097	-		Echvi_2285	0.24	-0.4
2,707,097	-		Echvi_2285	0.24	-0.2
2,707,097	-		Echvi_2285	0.24	-1.4
2,707,097	-		Echvi_2285	0.24	+0.2
2,707,104	+		Echvi_2285	0.25	-0.5
2,707,212	-		Echvi_2285	0.41	+0.9
2,707,245	+		Echvi_2285	0.46	+0.0
2,707,333	+		Echvi_2285	0.59	+0.1
2,707,333	+		Echvi_2285	0.59	-1.3
2,707,334	-		Echvi_2285	0.59	-0.4
2,707,334	-		Echvi_2285	0.59	+0.3
2,707,399	+		Echvi_2285	0.69	-2.0
2,707,399	+		Echvi_2285	0.69	-0.9
2,707,425	+		Echvi_2285	0.72	-0.9
2,707,558	-				+0.6
2,707,560	+				-1.3
2,707,561	-				+0.0
2,707,569	+				-0.8
2,707,613	+				-0.3
2,707,645	+				+1.3
2,707,646	-				-0.4
2,707,646	-				+0.6
2,707,646	-				+1.9
2,707,679	+				-0.0
2,707,683	+				-0.3
2,707,779	+				-0.7
2,707,780	-				+0.9
2,707,780	-				+0.5
2,707,856	-				-0.8
2,708,033	-				-0.4
2,708,033	-				+0.3
2,708,033	-				+3.2
2,708,036	+				-0.4
2,708,036	+				-2.1
2,708,037	-				+1.1
2,708,037	-				+1.1
2,708,041	-				-0.0
2,708,065	+				+0.1
2,708,096	+		Echvi_2286	0.13	-0.7
2,708,106	-		Echvi_2286	0.14	+0.3
2,708,108	-		Echvi_2286	0.14	-0.6
2,708,161	+		Echvi_2286	0.18	-2.1
2,708,162	-		Echvi_2286	0.18	+1.0
2,708,166	+		Echvi_2286	0.19	-0.4
2,708,480	+		Echvi_2286	0.46	-1.4
2,708,519	-		Echvi_2286	0.50	-0.4