Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2089

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
2,464,458	+		Echvi_2087	0.68	+0.9
2,464,458	+		Echvi_2087	0.68	-0.2
2,464,459	-		Echvi_2087	0.69	-2.4
2,464,459	-		Echvi_2087	0.69	-0.7
2,464,459	-		Echvi_2087	0.69	-2.1
2,464,459	-		Echvi_2087	0.69	-1.2
2,464,459	-		Echvi_2087	0.69	-1.0
2,464,459	-		Echvi_2087	0.69	-0.1
2,464,459	-		Echvi_2087	0.69	-0.1
2,464,459	-		Echvi_2087	0.69	-1.5
2,464,480	-		Echvi_2087	0.71	+0.5
2,464,480	-		Echvi_2087	0.71	-0.4
2,464,552	-		Echvi_2087	0.80	-0.8
2,464,552	-		Echvi_2087	0.80	-0.8
2,464,560	+		Echvi_2087	0.81	+0.3
2,464,560	+		Echvi_2087	0.81	+0.9
2,464,581	-		Echvi_2087	0.84	-0.6
2,464,711	+				+0.0
2,464,711	+				+1.4
2,464,712	-				-0.1
2,464,712	-				+1.3
2,464,752	-				+1.2
2,464,847	+		Echvi_2088	0.25	+0.0
2,464,848	-		Echvi_2088	0.26	+0.0
2,464,866	-		Echvi_2088	0.29	+0.6
2,464,866	-		Echvi_2088	0.29	-0.1
2,464,869	+		Echvi_2088	0.30	+1.2
2,464,897	-		Echvi_2088	0.35	+0.3
2,464,938	-		Echvi_2088	0.43	-0.4
2,465,091	-		Echvi_2088	0.73	+0.4
2,465,108	-		Echvi_2088	0.76	-1.4
2,465,108	-		Echvi_2088	0.76	+0.6
2,465,166	+		Echvi_2088	0.87	+0.9
2,465,250	+				-0.4
2,465,263	-				-2.0
2,465,289	+				+0.2
2,465,290	-				-0.8
2,465,294	-				+0.4
2,465,314	-				+0.1
2,465,338	+				-1.2
2,465,338	+				-0.3
2,465,339	-				-1.2
2,465,339	-				+0.4
2,465,413	+				-0.7
2,465,414	-				-2.6
2,465,428	+				-1.2
2,465,429	-				-0.7
2,465,432	+				-1.4
2,465,432	+				+0.7
2,465,433	-				-0.5
2,465,440	+				+0.2
2,465,443	+				-0.6
2,465,444	-				+0.2
2,465,446	+				-0.8
2,465,449	+				+2.9
2,465,449	+				-0.2
2,465,452	+				-2.6
2,465,458	+				+0.4
2,465,480	+				-0.2
2,465,480	+				-1.5
2,465,480	+				-0.9
2,465,480	+				-0.2
2,465,481	-				+0.5
2,465,481	-				+0.4
2,465,482	+				-0.6
2,465,482	+				-0.1
2,465,501	+				-0.6
2,465,595	-		Echvi_2089	0.14	+1.5
2,465,601	-		Echvi_2089	0.15	-1.5
2,465,691	+		Echvi_2089	0.22	-0.1
2,465,745	+		Echvi_2089	0.26	-0.7
2,465,746	-		Echvi_2089	0.26	+1.4
2,465,780	-		Echvi_2089	0.28	-0.8
2,465,799	+		Echvi_2089	0.30	+1.9
2,465,817	+		Echvi_2089	0.31	+0.9
2,465,817	+		Echvi_2089	0.31	-0.9
2,465,817	+		Echvi_2089	0.31	+0.0
2,465,817	+		Echvi_2089	0.31	-0.9
2,465,817	+		Echvi_2089	0.31	+0.8
2,465,818	-		Echvi_2089	0.31	-1.2
2,465,818	-		Echvi_2089	0.31	-0.6
2,465,916	-		Echvi_2089	0.39	+0.0
2,465,957	+		Echvi_2089	0.42	-0.4
2,465,957	+		Echvi_2089	0.42	+0.5
2,465,958	-		Echvi_2089	0.42	-0.6
2,465,958	-		Echvi_2089	0.42	+0.6
2,465,958	-		Echvi_2089	0.42	+0.0
2,466,074	+		Echvi_2089	0.51	-1.0
2,466,074	+		Echvi_2089	0.51	-0.4
2,466,074	+		Echvi_2089	0.51	+0.4
2,466,107	-		Echvi_2089	0.53	+0.1
2,466,157	+		Echvi_2089	0.57	-1.0
2,466,158	-		Echvi_2089	0.57	-1.2
2,466,159	+		Echvi_2089	0.57	+0.5
2,466,159	+		Echvi_2089	0.57	-3.5
2,466,160	-		Echvi_2089	0.57	-0.2
2,466,160	-		Echvi_2089	0.57	-0.9
2,466,160	-		Echvi_2089	0.57	+0.3
2,466,160	-		Echvi_2089	0.57	-1.1
2,466,160	-		Echvi_2089	0.57	+0.4
2,466,160	-		Echvi_2089	0.57	-0.4
2,466,160	-		Echvi_2089	0.57	+0.5
2,466,165	+		Echvi_2089	0.58	-0.0
2,466,221	+		Echvi_2089	0.62	-1.4
2,466,222	-		Echvi_2089	0.62	-0.1
2,466,227	+		Echvi_2089	0.62	+0.1
2,466,227	+		Echvi_2089	0.62	+0.1
2,466,266	-		Echvi_2089	0.65	-0.7
2,466,266	-		Echvi_2089	0.65	-0.9
2,466,276	+		Echvi_2089	0.66	-0.6
2,466,276	+		Echvi_2089	0.66	-0.1
2,466,338	-		Echvi_2089	0.71	-1.9
2,466,346	+		Echvi_2089	0.71	-1.3
2,466,346	+		Echvi_2089	0.71	+0.3
2,466,347	-		Echvi_2089	0.71	+0.9
2,466,347	-		Echvi_2089	0.71	-0.1
2,466,432	-		Echvi_2089	0.78	-0.2
2,466,494	+		Echvi_2089	0.83	-1.0
2,466,581	+		Echvi_2089	0.89	-1.1
2,466,581	+		Echvi_2089	0.89	-0.1
2,466,582	-		Echvi_2089	0.89	-0.8
2,466,603	+				+1.4
2,466,603	+				-1.8
2,466,603	+				+0.5
2,466,603	+				-0.4
2,466,603	+				-1.3
2,466,603	+				-1.8
2,466,604	-				+0.4
2,466,604	-				+0.4
2,466,604	-				+0.1
2,466,604	-				+0.7
2,466,604	-				+0.3
2,466,605	+				-2.0
2,466,606	-				+1.1
2,466,774	-				-0.5
2,466,793	-				+0.2
2,466,826	-				+0.6
2,466,914	+		Echvi_2090	0.15	-2.4
2,466,914	+		Echvi_2090	0.15	-0.9
2,466,915	-		Echvi_2090	0.15	-0.2
2,466,915	-		Echvi_2090	0.15	+0.7
2,466,915	-		Echvi_2090	0.15	-0.7
2,466,929	-		Echvi_2090	0.18	+0.6
2,466,941	+		Echvi_2090	0.21	-1.4
2,466,942	-		Echvi_2090	0.21	-0.0
2,466,942	-		Echvi_2090	0.21	-0.5
2,466,942	-		Echvi_2090	0.21	-0.4
2,466,947	+		Echvi_2090	0.22	-0.6
2,466,947	+		Echvi_2090	0.22	+0.1
2,466,947	+		Echvi_2090	0.22	-1.8
2,466,948	-		Echvi_2090	0.22	+1.0
2,466,948	-		Echvi_2090	0.22	+0.2
2,466,948	-		Echvi_2090	0.22	+0.3
2,466,948	-		Echvi_2090	0.22	+1.9
2,466,948	-		Echvi_2090	0.22	+0.3
2,467,118	-		Echvi_2090	0.59	-0.3
2,467,166	+		Echvi_2090	0.69	-1.3
2,467,166	+		Echvi_2090	0.69	+0.1
2,467,169	-		Echvi_2090	0.70	-0.6
2,467,264	+				-2.9
2,467,406	-				-0.4
2,467,467	+		Echvi_2091	0.13	-0.5
2,467,520	-		Echvi_2091	0.18	+0.1
2,467,520	-		Echvi_2091	0.18	-0.8
2,467,528	+		Echvi_2091	0.18	-1.2
2,467,529	-		Echvi_2091	0.18	+0.4
2,467,575	+		Echvi_2091	0.23	-0.4
2,467,575	+		Echvi_2091	0.23	+0.6
2,467,706	+		Echvi_2091	0.34	+0.2
2,467,707	-		Echvi_2091	0.35	+0.1
2,467,707	-		Echvi_2091	0.35	+0.6
2,467,707	-		Echvi_2091	0.35	+1.3
2,467,707	-		Echvi_2091	0.35	+0.4
2,467,722	-		Echvi_2091	0.36	+0.5