Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2082

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
2,454,425	+				+0.6
2,454,538	-				+0.9
2,454,540	+				-1.9
2,454,541	-				+0.8
2,454,547	-				-1.9
2,454,685	+		Echvi_2081	0.17	-0.8
2,454,685	+		Echvi_2081	0.17	-1.5
2,454,686	-		Echvi_2081	0.17	-2.1
2,454,686	-		Echvi_2081	0.17	+1.0
2,454,750	+		Echvi_2081	0.24	+0.8
2,454,775	+		Echvi_2081	0.27	-1.9
2,454,827	+		Echvi_2081	0.34	+0.0
2,454,827	+		Echvi_2081	0.34	-1.6
2,454,828	-		Echvi_2081	0.34	+0.1
2,454,837	+		Echvi_2081	0.35	-1.5
2,454,841	+		Echvi_2081	0.35	+0.7
2,454,842	-		Echvi_2081	0.35	+0.7
2,454,842	-				+1.9
2,454,842	-		Echvi_2081	0.35	-1.9
2,454,948	-		Echvi_2081	0.48	-0.2
2,454,948	-		Echvi_2081	0.48	-0.4
2,454,954	-		Echvi_2081	0.49	+1.0
2,454,954	-		Echvi_2081	0.49	+0.8
2,454,954	-		Echvi_2081	0.49	+0.2
2,454,959	-		Echvi_2081	0.49	+2.3
2,455,023	+		Echvi_2081	0.57	+0.0
2,455,122	-		Echvi_2081	0.69	+0.8
2,455,174	-		Echvi_2081	0.75	+1.9
2,455,239	+		Echvi_2081	0.83	-0.2
2,455,240	-		Echvi_2081	0.83	-1.0
2,455,240	-		Echvi_2081	0.83	+1.4
2,455,240	-				+4.3
2,455,335	+				+0.4
2,455,392	+				+1.8
2,455,393	-				+0.1
2,455,393	-				-1.2
2,455,393	-				+0.1
2,455,398	-				+0.9
2,455,399	+				+0.1
2,455,403	+				+0.7
2,455,403	+				-0.2
2,455,404	-				-0.3
2,455,404	-				-0.7
2,455,404	-				+0.2
2,455,404	-				-1.5
2,455,404	-				+0.0
2,455,404	-				+0.4
2,455,456	+				-0.1
2,455,565	+		Echvi_2082	0.18	+0.8
2,455,613	-		Echvi_2082	0.23	+0.6
2,455,613	-		Echvi_2082	0.23	+0.8
2,455,808	-		Echvi_2082	0.43	+1.9
2,456,053	+		Echvi_2082	0.69	-2.0
2,456,054	-		Echvi_2082	0.69	+3.3
2,456,097	+		Echvi_2082	0.74	+2.8
2,456,097	+		Echvi_2082	0.74	-1.3
2,456,097	+		Echvi_2082	0.74	+0.7
2,456,098	-		Echvi_2082	0.74	-0.8
2,456,098	-		Echvi_2082	0.74	-1.1
2,456,098	-		Echvi_2082	0.74	-0.8
2,456,190	+		Echvi_2082	0.83	-0.2
2,456,191	-		Echvi_2082	0.83	-0.4
2,456,191	-		Echvi_2082	0.83	-0.2
2,456,336	-				-0.5
2,456,367	+				-0.6
2,456,370	-				+0.9
2,456,407	+				+2.2
2,456,407	+				-0.3
2,456,407	+				-0.1
2,456,408	-				-0.2
2,456,408	-				-0.1
2,456,438	+				+2.4
2,456,462	+				-0.4
2,456,462	+				-1.8
2,456,463	-				+0.5
2,456,609	+		Echvi_2083	0.20	-1.1
2,456,650	+		Echvi_2083	0.23	+0.1
2,456,651	-		Echvi_2083	0.23	+0.0
2,456,665	-		Echvi_2083	0.25	+1.5
2,456,679	+		Echvi_2083	0.26	+0.7
2,456,680	-		Echvi_2083	0.26	-0.1
2,456,680	-		Echvi_2083	0.26	-1.0
2,456,688	+		Echvi_2083	0.26	+0.9
2,456,688	+		Echvi_2083	0.26	+1.0
2,456,688	+		Echvi_2083	0.26	-0.4
2,456,689	-		Echvi_2083	0.26	+0.5
2,456,689	-		Echvi_2083	0.26	+0.4
2,456,689	-		Echvi_2083	0.26	-0.6
2,456,690	+		Echvi_2083	0.26	+0.1
2,456,691	-		Echvi_2083	0.27	-1.6
2,456,801	+		Echvi_2083	0.35	+1.9
2,456,802	-		Echvi_2083	0.35	-0.7
2,456,828	-		Echvi_2083	0.37	-0.6
2,456,828	-		Echvi_2083	0.37	+0.1
2,456,843	+		Echvi_2083	0.38	+0.8
2,456,843	+		Echvi_2083	0.38	-2.4
2,456,843	+		Echvi_2083	0.38	-0.9
2,456,843	+		Echvi_2083	0.38	+0.9
2,456,848	+		Echvi_2083	0.39	+0.6
2,456,848	+		Echvi_2083	0.39	+0.5
2,456,848	+		Echvi_2083	0.39	+0.4
2,456,848	+		Echvi_2083	0.39	+0.9
2,456,848	+		Echvi_2083	0.39	-0.9
2,456,849	-		Echvi_2083	0.39	-0.3
2,456,849	-		Echvi_2083	0.39	-0.9
2,456,857	-		Echvi_2083	0.39	-0.3
2,456,936	-		Echvi_2083	0.45	-1.4
2,456,977	-		Echvi_2083	0.49	-0.4
2,457,009	-		Echvi_2083	0.51	-0.4
2,457,194	+		Echvi_2083	0.65	-0.4
2,457,195	-		Echvi_2083	0.65	+1.4
2,457,195	-		Echvi_2083	0.65	+1.4
2,457,197	-		Echvi_2083	0.66	+0.5
2,457,197	-		Echvi_2083	0.66	-0.2
2,457,197	-		Echvi_2083	0.66	+0.0
2,457,197	-		Echvi_2083	0.66	-1.0
2,457,197	-		Echvi_2083	0.66	-0.2
2,457,309	+		Echvi_2083	0.74	-1.5
2,457,326	+		Echvi_2083	0.76	+0.6
2,457,335	+		Echvi_2083	0.76	-0.4
2,457,335	+		Echvi_2083	0.76	+1.4
2,457,350	+		Echvi_2083	0.77	-1.2