Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1957

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
2,297,630	+		Echvi_1956	0.60	-1.1
2,297,631	-		Echvi_1956	0.60	-0.0
2,297,672	-		Echvi_1956	0.62	+0.8
2,297,672	-		Echvi_1956	0.62	+0.6
2,297,754	+		Echvi_1956	0.67	+0.5
2,297,787	-		Echvi_1956	0.68	-0.3
2,297,792	-		Echvi_1956	0.68	+0.9
2,297,796	+		Echvi_1956	0.69	-0.0
2,297,797	-		Echvi_1956	0.69	-0.5
2,297,850	+		Echvi_1956	0.71	+0.4
2,297,854	+		Echvi_1956	0.72	-0.5
2,297,854	+		Echvi_1956	0.72	-1.4
2,297,893	+		Echvi_1956	0.74	+0.9
2,297,906	-		Echvi_1956	0.74	+0.2
2,297,906	-		Echvi_1956	0.74	-0.2
2,297,956	-		Echvi_1956	0.77	-0.2
2,297,984	+		Echvi_1956	0.78	+0.1
2,297,985	-		Echvi_1956	0.78	+3.2
2,297,988	+		Echvi_1956	0.78	-0.1
2,297,988	+		Echvi_1956	0.78	+0.6
2,297,989	-		Echvi_1956	0.79	+0.3
2,297,989	-		Echvi_1956	0.79	+1.4
2,297,992	-		Echvi_1956	0.79	+0.8
2,297,992	-		Echvi_1956	0.79	-1.9
2,297,995	+		Echvi_1956	0.79	-0.0
2,297,995	+		Echvi_1956	0.79	+0.1
2,297,996	-		Echvi_1956	0.79	+0.4
2,297,996	-		Echvi_1956	0.79	-0.7
2,297,996	-		Echvi_1956	0.79	-0.0
2,298,047	+		Echvi_1956	0.81	+1.6
2,298,048	-		Echvi_1956	0.82	+0.6
2,298,048	-		Echvi_1956	0.82	-1.0
2,298,048	-		Echvi_1956	0.82	+1.6
2,298,062	-		Echvi_1956	0.82	+1.0
2,298,163	+		Echvi_1956	0.87	-0.2
2,298,186	-		Echvi_1956	0.89	-1.5
2,298,186	-		Echvi_1956	0.89	-0.5
2,298,190	+		Echvi_1956	0.89	-2.2
2,298,190	+		Echvi_1956	0.89	+0.6
2,298,190	+		Echvi_1956	0.89	+0.4
2,298,190	+		Echvi_1956	0.89	+0.6
2,298,256	+				-0.2
2,298,256	+				+1.2
2,298,344	+				-0.2
2,298,379	+				-0.8
2,298,393	+				+0.9
2,298,393	+				+0.8
2,298,393	+				-1.5
2,298,393	+				+1.3
2,298,393	+				-0.3
2,298,395	+				+0.5
2,298,395	+				+0.2
2,298,409	+				-0.4
2,298,433	+				+0.3
2,298,433	+				+0.4
2,298,434	-				-1.0
2,298,437	+				-0.3
2,298,438	-				-0.2
2,298,472	-				+0.9
2,298,552	-				+1.0
2,298,552	-				+0.1
2,298,552	-				-0.7
2,298,552	-				+0.4
2,298,552	-				-1.1
2,298,552	-				+1.0
2,298,552	-				-2.5
2,298,571	-				+0.4
2,298,571	-				-0.5
2,298,572	+				-0.5
2,298,572	+				+0.3
2,298,573	-				+1.1
2,298,573	-				+0.5
2,298,575	+				-0.4
2,298,585	-				+0.3
2,298,613	+				+2.0
2,298,617	+				+0.4
2,298,618	-				+0.4
2,298,649	-				+1.3
2,298,656	-		Echvi_1957	0.10	+0.9
2,298,681	-		Echvi_1957	0.16	+0.1
2,298,687	+		Echvi_1957	0.18	+0.8
2,298,716	+		Echvi_1957	0.24	+1.2
2,298,716	+		Echvi_1957	0.24	+0.6
2,298,717	-		Echvi_1957	0.25	-0.9
2,298,717	-		Echvi_1957	0.25	+0.4
2,298,717	-		Echvi_1957	0.25	-0.6
2,298,720	-		Echvi_1957	0.25	+0.5
2,298,721	+		Echvi_1957	0.26	+0.3
2,298,753	+		Echvi_1957	0.33	+0.2
2,298,753	+		Echvi_1957	0.33	-0.1
2,298,754	-		Echvi_1957	0.33	-0.2
2,298,759	+		Echvi_1957	0.35	-0.2
2,298,761	+		Echvi_1957	0.35	-1.0
2,298,761	+		Echvi_1957	0.35	-1.4
2,298,761	+		Echvi_1957	0.35	+2.2
2,298,761	+		Echvi_1957	0.35	+0.3
2,298,761	+		Echvi_1957	0.35	+1.4
2,298,762	-		Echvi_1957	0.35	+0.5
2,298,762	-		Echvi_1957	0.35	-0.2
2,298,762	-		Echvi_1957	0.35	-1.3
2,298,762	-		Echvi_1957	0.35	-0.2
2,298,762	-		Echvi_1957	0.35	-0.1
2,298,762	-		Echvi_1957	0.35	+1.2
2,298,764	+		Echvi_1957	0.36	-0.6
2,298,764	+		Echvi_1957	0.36	+0.8
2,298,764	+		Echvi_1957	0.36	-2.3
2,298,765	-		Echvi_1957	0.36	+0.9
2,298,765	-		Echvi_1957	0.36	-0.4
2,298,770	+		Echvi_1957	0.37	+0.0
2,298,770	+		Echvi_1957	0.37	+1.5
2,298,770	+		Echvi_1957	0.37	+1.0
2,298,770	+		Echvi_1957	0.37	-0.5
2,298,772	+		Echvi_1957	0.38	+0.5
2,298,786	+		Echvi_1957	0.41	+0.3
2,298,832	+		Echvi_1957	0.52	-2.1
2,298,837	+		Echvi_1957	0.53	+1.0
2,298,842	+		Echvi_1957	0.54	+0.4
2,298,842	+		Echvi_1957	0.54	+0.7
2,298,842	+		Echvi_1957	0.54	+0.2
2,298,842	+		Echvi_1957	0.54	+0.5
2,298,842	+		Echvi_1957	0.54	+1.0
2,298,903	-		Echvi_1957	0.68	+0.3
2,298,909	-		Echvi_1957	0.70	+1.0
2,298,917	+		Echvi_1957	0.72	-1.0
2,298,920	+		Echvi_1957	0.72	+0.4
2,298,942	+		Echvi_1957	0.77	+0.2
2,298,942	+		Echvi_1957	0.77	+0.1
2,298,942	+		Echvi_1957	0.77	-0.1
2,299,008	+				-0.5
2,299,008	+				-0.0
2,299,008	+				-0.4
2,299,008	+				+0.6
2,299,008	+				-0.0
2,299,009	-				+0.1
2,299,010	+				-1.5
2,299,011	-				+0.8
2,299,012	+				-0.0
2,299,019	+				+0.4
2,299,019	+				-0.8
2,299,063	-				-0.3
2,299,063	-				-0.5
2,299,074	+				+0.4
2,299,075	-				+0.9
2,299,075	-				+1.5
2,299,075	-				+0.5
2,299,103	+		Echvi_1958	0.10	-0.0
2,299,116	-		Echvi_1958	0.12	+0.4
2,299,131	+		Echvi_1958	0.14	+0.6
2,299,131	+		Echvi_1958	0.14	+0.4
2,299,131	+		Echvi_1958	0.14	+0.6
2,299,132	-		Echvi_1958	0.14	-1.4
2,299,132	-		Echvi_1958	0.14	+0.2
2,299,132	-		Echvi_1958	0.14	+1.6
2,299,164	+		Echvi_1958	0.18	-0.2
2,299,178	-		Echvi_1958	0.20	+0.5
2,299,178	-		Echvi_1958	0.20	-1.4
2,299,178	-		Echvi_1958	0.20	-2.5
2,299,187	+		Echvi_1958	0.21	+0.2
2,299,187	+		Echvi_1958	0.21	+0.4
2,299,187	+		Echvi_1958	0.21	-0.1
2,299,187	+		Echvi_1958	0.21	-0.5
2,299,188	-		Echvi_1958	0.21	+0.1
2,299,188	-		Echvi_1958	0.21	+0.4
2,299,216	-		Echvi_1958	0.24	-0.0
2,299,221	+		Echvi_1958	0.25	+0.0
2,299,221	+		Echvi_1958	0.25	-1.5
2,299,224	-		Echvi_1958	0.25	-0.1
2,299,224	-		Echvi_1958	0.25	+0.3
2,299,224	-		Echvi_1958	0.25	-0.4
2,299,234	+		Echvi_1958	0.27	-1.2
2,299,235	-		Echvi_1958	0.27	+0.2
2,299,249	+		Echvi_1958	0.29	-0.5
2,299,250	-		Echvi_1958	0.29	+1.3
2,299,250	-		Echvi_1958	0.29	-0.3
2,299,250	-		Echvi_1958	0.29	+0.2
2,299,251	+		Echvi_1958	0.29	-0.1
2,299,251	+		Echvi_1958	0.29	-0.4
2,299,251	+		Echvi_1958	0.29	-0.4
2,299,252	-		Echvi_1958	0.29	-0.7
2,299,252	-		Echvi_1958	0.29	+0.4
2,299,253	+		Echvi_1958	0.29	-1.0
2,299,253	+		Echvi_1958	0.29	+0.2
2,299,253	+		Echvi_1958	0.29	-1.0
2,299,253	+		Echvi_1958	0.29	+0.4
2,299,254	-		Echvi_1958	0.29	+1.1
2,299,254	-		Echvi_1958	0.29	+0.3
2,299,254	-		Echvi_1958	0.29	+0.1
2,299,254	-		Echvi_1958	0.29	-0.8
2,299,254	-		Echvi_1958	0.29	-1.1
2,299,288	-		Echvi_1958	0.34	-0.8
2,299,299	+		Echvi_1958	0.35	+0.2
2,299,303	-		Echvi_1958	0.35	+0.1
2,299,303	-		Echvi_1958	0.35	-0.0
2,299,324	+		Echvi_1958	0.38	-0.0
2,299,325	-		Echvi_1958	0.38	-0.4
2,299,325	-		Echvi_1958	0.38	+0.3
2,299,329	-		Echvi_1958	0.39	+0.1
2,299,333	-		Echvi_1958	0.39	+0.1
2,299,333	-		Echvi_1958	0.39	+0.1
2,299,333	-		Echvi_1958	0.39	+0.5
2,299,350	-		Echvi_1958	0.41	-0.5
2,299,374	-		Echvi_1958	0.45	-1.5
2,299,374	-		Echvi_1958	0.45	+0.6
2,299,410	+		Echvi_1958	0.49	+0.5
2,299,410	+		Echvi_1958	0.49	+0.5
2,299,410	+		Echvi_1958	0.49	+0.7
2,299,410	+		Echvi_1958	0.49	+0.2
2,299,411	-		Echvi_1958	0.49	-0.9
2,299,411	-		Echvi_1958	0.49	+0.3
2,299,413	+		Echvi_1958	0.49	-1.4
2,299,413	+		Echvi_1958	0.49	+1.6
2,299,413	+		Echvi_1958	0.49	-0.4
2,299,413	+		Echvi_1958	0.49	+1.0
2,299,413	+		Echvi_1958	0.49	-0.0
2,299,413	+		Echvi_1958	0.49	+0.8
2,299,414	-		Echvi_1958	0.50	-0.2
2,299,414	-		Echvi_1958	0.50	+0.3
2,299,414	-		Echvi_1958	0.50	-0.7
2,299,414	-		Echvi_1958	0.50	-0.8
2,299,414	-		Echvi_1958	0.50	+2.4
2,299,421	-		Echvi_1958	0.51	-0.4
2,299,447	+		Echvi_1958	0.54	+1.4
2,299,448	-		Echvi_1958	0.54	+0.4
2,299,487	+		Echvi_1958	0.59	+0.5
2,299,493	-		Echvi_1958	0.60	+0.4
2,299,503	+		Echvi_1958	0.61	-1.4
2,299,504	-		Echvi_1958	0.61	-2.1
2,299,504	-		Echvi_1958	0.61	-0.3
2,299,530	+		Echvi_1958	0.64	+1.0
2,299,531	-		Echvi_1958	0.65	+2.0
2,299,545	+		Echvi_1958	0.66	+1.8
2,299,546	-		Echvi_1958	0.66	+3.1
2,299,546	-		Echvi_1958	0.66	+0.4
2,299,546	-		Echvi_1958	0.66	-0.1
2,299,548	+		Echvi_1958	0.67	-1.1
2,299,548	+		Echvi_1958	0.67	+0.5
2,299,549	-		Echvi_1958	0.67	-0.7
2,299,549	-		Echvi_1958	0.67	-1.3
2,299,549	-		Echvi_1958	0.67	+0.9
2,299,563	+		Echvi_1958	0.69	-0.0
2,299,571	+		Echvi_1958	0.70	-0.2
2,299,571	+		Echvi_1958	0.70	+1.3
2,299,572	-		Echvi_1958	0.70	-0.4
2,299,583	+		Echvi_1958	0.71	+0.0
2,299,641	+		Echvi_1958	0.78	-1.0
2,299,643	+		Echvi_1958	0.79	+0.2
2,299,696	-		Echvi_1958	0.85	+0.4
2,299,696	-		Echvi_1958	0.85	-0.8
2,299,699	+		Echvi_1958	0.86	+0.7
2,299,699	+		Echvi_1958	0.86	+0.5
2,299,700	-		Echvi_1958	0.86	-0.4
2,299,700	-		Echvi_1958	0.86	-0.0
2,299,734	-				+0.3
2,299,762	-				-2.1
2,299,768	-				-1.2
2,299,774	-				-0.7
2,299,774	-				-0.5
2,299,774	-				-0.3
2,299,793	-				-0.8
2,299,805	-				-0.5
2,299,844	+				-0.4
2,299,844	+				-1.1
2,299,864	+				+1.6
2,299,864	+				-0.0
2,299,864	+				+0.6
2,299,864	+				+0.3
2,299,885	+				+0.2
2,299,909	-				-0.3
2,299,909	-				+0.4
2,299,964	-		Echvi_1959	0.12	-0.2
2,299,964	-		Echvi_1959	0.12	-0.2
2,299,982	+		Echvi_1959	0.16	-0.0
2,300,003	+		Echvi_1959	0.20	+0.2