Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1932

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
2,274,097	+		Echvi_1931	0.61	-0.2
2,274,138	+		Echvi_1931	0.65	+0.3
2,274,201	-		Echvi_1931	0.71	-1.5
2,274,210	+				+3.0
2,274,366	+		Echvi_1931	0.87	+1.0
2,274,692	+				+0.5
2,274,807	+				+0.6
2,274,969	+				+0.2
2,275,212	+		Echvi_1932	0.16	-0.6
2,275,293	+		Echvi_1932	0.21	+0.5
2,275,293	+		Echvi_1932	0.21	-0.6
2,275,351	-		Echvi_1932	0.24	-0.1
2,275,357	+		Echvi_1932	0.24	+0.3
2,275,384	-		Echvi_1932	0.26	+0.7
2,275,420	-		Echvi_1932	0.28	-1.0
2,275,420	-		Echvi_1932	0.28	-0.5
2,275,549	+		Echvi_1932	0.35	+1.7
2,275,550	-		Echvi_1932	0.35	+1.0
2,275,622	-		Echvi_1932	0.39	-0.8
2,275,660	-		Echvi_1932	0.41	+0.3
2,275,669	+		Echvi_1932	0.42	-1.6
2,275,671	+		Echvi_1932	0.42	+0.7
2,275,671	+		Echvi_1932	0.42	+1.5
2,275,672	-		Echvi_1932	0.42	-1.1
2,275,711	-		Echvi_1932	0.44	+0.5
2,275,725	-		Echvi_1932	0.45	-0.6
2,275,733	+		Echvi_1932	0.45	+4.3
2,275,758	-		Echvi_1932	0.46	-0.4
2,275,780	-		Echvi_1932	0.48	-0.1
2,275,781	+		Echvi_1932	0.48	+2.8
2,275,809	+		Echvi_1932	0.49	+1.7
2,275,809	+		Echvi_1932	0.49	-0.3
2,275,809	+		Echvi_1932	0.49	-0.1
2,275,810	-		Echvi_1932	0.49	-1.0
2,275,812	+		Echvi_1932	0.49	+0.6
2,275,813	-		Echvi_1932	0.50	+0.5
2,275,821	-		Echvi_1932	0.50	-2.4
2,275,821	-		Echvi_1932	0.50	+1.2
2,275,841	+		Echvi_1932	0.51	-1.7
2,275,853	-		Echvi_1932	0.52	+1.2
2,275,972	+		Echvi_1932	0.58	+0.7
2,276,040	-		Echvi_1932	0.62	+2.0
2,276,071	-		Echvi_1932	0.64	+0.4
2,276,079	+		Echvi_1932	0.64	+1.3
2,276,135	-		Echvi_1932	0.67	-0.0
2,276,144	-		Echvi_1932	0.68	+3.0
2,276,144	-		Echvi_1932	0.68	+0.6
2,276,144	-		Echvi_1932	0.68	-0.2
2,276,146	-		Echvi_1932	0.68	+1.2
2,276,198	+		Echvi_1932	0.71	+0.6
2,276,198	+		Echvi_1932	0.71	-0.1
2,276,198	+		Echvi_1932	0.71	-0.4
2,276,199	-		Echvi_1932	0.71	+1.4
2,276,242	+		Echvi_1932	0.73	-1.0
2,276,242	+		Echvi_1932	0.73	-1.7
2,276,242	+		Echvi_1932	0.73	+0.6
2,276,244	+		Echvi_1932	0.73	-2.2
2,276,244	+		Echvi_1932	0.73	+0.6
2,276,245	-		Echvi_1932	0.73	-0.3
2,276,280	+		Echvi_1932	0.75	-1.2
2,276,284	-		Echvi_1932	0.75	+2.0
2,276,313	+		Echvi_1932	0.77	+1.5
2,276,313	+		Echvi_1932	0.77	+0.0
2,276,313	+		Echvi_1932	0.77	-0.5
2,276,313	+		Echvi_1932	0.77	+1.2
2,276,313	+		Echvi_1932	0.77	-1.4
2,276,314	-		Echvi_1932	0.77	+0.7
2,276,368	+		Echvi_1932	0.80	-0.6
2,276,368	+		Echvi_1932	0.80	-1.0
2,276,386	-		Echvi_1932	0.81	-0.4
2,276,386	-		Echvi_1932	0.81	+0.7
2,276,388	+		Echvi_1932	0.81	+0.7
2,276,427	+		Echvi_1932	0.83	-0.8
2,276,428	-		Echvi_1932	0.83	+0.1
2,276,431	+		Echvi_1932	0.83	-0.3
2,276,460	+		Echvi_1932	0.85	+1.2
2,276,461	-		Echvi_1932	0.85	+0.9
2,276,461	-		Echvi_1932	0.85	-0.8
2,276,527	-		Echvi_1932	0.89	+1.6
2,276,527	-		Echvi_1932	0.89	-3.1
2,276,532	+		Echvi_1932	0.89	+0.9
2,276,536	-		Echvi_1932	0.89	-0.3
2,276,536	-		Echvi_1932	0.89	+0.2
2,276,561	+				-0.7
2,276,561	+				-0.9
2,276,562	-				-0.7
2,276,562	-				+1.7
2,276,562	-				-0.9
2,276,563	+				-0.5
2,276,564	-				+1.5
2,276,564	-				-1.0
2,276,564	-				+0.4
2,276,564	-				+0.0
2,276,677	+				-0.2
2,276,697	+				+1.4
2,276,698	-				-0.5
2,276,698	-				-0.1
2,276,698	-				+0.7
2,276,731	-				+0.5
2,276,735	+				+0.5
2,276,736	-				+1.1
2,276,736	-				-0.1
2,276,736	-				-0.6
2,276,778	+				-0.5
2,276,784	+				-0.1
2,276,872	+		Echvi_1933	0.13	-1.4
2,276,918	-		Echvi_1933	0.18	+0.6
2,276,932	-		Echvi_1933	0.20	+0.2
2,276,949	-		Echvi_1933	0.21	-0.8
2,276,949	-		Echvi_1933	0.21	+0.8
2,276,951	-		Echvi_1933	0.22	-2.4
2,276,971	+		Echvi_1933	0.24	+0.7
2,276,971	+		Echvi_1933	0.24	-0.8
2,277,065	-		Echvi_1933	0.34	+2.0
2,277,178	+		Echvi_1933	0.47	-0.8
2,277,179	-		Echvi_1933	0.47	-1.3
2,277,185	+		Echvi_1933	0.48	+1.2
2,277,185	+		Echvi_1933	0.48	+0.5
2,277,188	+		Echvi_1933	0.48	-0.4
2,277,218	-		Echvi_1933	0.52	+0.7
2,277,277	+		Echvi_1933	0.58	-0.2
2,277,350	+		Echvi_1933	0.66	-0.4
2,277,378	+		Echvi_1933	0.69	+2.2
2,277,379	-		Echvi_1933	0.70	+1.3
2,277,390	-		Echvi_1933	0.71	-0.0
2,277,434	+		Echvi_1933	0.76	-0.0
2,277,444	-		Echvi_1933	0.77	-0.2
2,277,447	+		Echvi_1933	0.77	-0.6
2,277,448	-		Echvi_1933	0.77	-1.1
2,277,453	+		Echvi_1933	0.78	-0.0
2,277,539	+		Echvi_1933	0.87	+0.2
2,277,551	+		Echvi_1933	0.89	-0.5
2,277,555	-		Echvi_1933	0.89	+0.7
2,277,555	-		Echvi_1933	0.89	-1.7
2,277,575	+				-1.4
2,277,637	+				+1.3
2,277,637	+				+0.6
2,277,721	+		Echvi_1934	0.26	+0.1
2,277,721	+		Echvi_1934	0.26	+0.4
2,277,724	+		Echvi_1934	0.28	-0.8
2,277,725	-		Echvi_1934	0.28	-1.4