Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1919

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
2,252,894	+		Echvi_1918	0.13	+1.0
2,252,894	+		Echvi_1918	0.13	+0.8
2,252,900	+		Echvi_1918	0.14	+0.7
2,252,900	+		Echvi_1918	0.14	+1.4
2,252,901	-		Echvi_1918	0.14	+1.0
2,252,901	-		Echvi_1918	0.14	-0.7
2,252,901	-		Echvi_1918	0.14	+1.0
2,252,901	-		Echvi_1918	0.14	+0.3
2,252,901	-		Echvi_1918	0.14	+0.1
2,252,901	-		Echvi_1918	0.14	+0.9
2,252,906	+		Echvi_1918	0.14	+0.8
2,252,945	-		Echvi_1918	0.18	+0.2
2,252,950	+		Echvi_1918	0.18	-0.4
2,252,950	+		Echvi_1918	0.18	-1.3
2,252,999	+		Echvi_1918	0.23	-2.2
2,253,057	+		Echvi_1918	0.29	-0.4
2,253,057	+		Echvi_1918	0.29	-1.2
2,253,058	-		Echvi_1918	0.29	+0.4
2,253,058	-		Echvi_1918	0.29	-0.6
2,253,058	-		Echvi_1918	0.29	+0.7
2,253,075	+		Echvi_1918	0.31	-0.1
2,253,076	-		Echvi_1918	0.31	+0.3
2,253,160	+		Echvi_1918	0.39	-0.3
2,253,161	-		Echvi_1918	0.39	+2.5
2,253,161	-		Echvi_1918	0.39	-0.3
2,253,172	+		Echvi_1918	0.40	-1.2
2,253,179	-		Echvi_1918	0.41	+0.8
2,253,179	-		Echvi_1918	0.41	+0.7
2,253,364	+		Echvi_1918	0.59	+0.2
2,253,365	-		Echvi_1918	0.59	-0.1
2,253,365	-		Echvi_1918	0.59	-0.2
2,253,365	-		Echvi_1918	0.59	+0.8
2,253,409	+		Echvi_1918	0.63	+0.8
2,253,410	-		Echvi_1918	0.63	+1.1
2,253,437	-		Echvi_1918	0.66	+1.3
2,253,437	-		Echvi_1918	0.66	-1.0
2,253,460	+		Echvi_1918	0.68	-1.2
2,253,460	+				-0.4
2,253,461	-		Echvi_1918	0.68	-0.2
2,253,467	+		Echvi_1918	0.69	-0.0
2,253,474	-		Echvi_1918	0.69	+1.5
2,253,499	+		Echvi_1918	0.72	+0.0
2,253,500	-		Echvi_1918	0.72	-0.8
2,253,500	-		Echvi_1918	0.72	+0.6
2,253,561	-		Echvi_1918	0.78	+0.1
2,253,576	+		Echvi_1918	0.79	+0.3
2,253,576	+		Echvi_1918	0.79	-2.0
2,253,578	+		Echvi_1918	0.80	-0.2
2,253,579	-		Echvi_1918	0.80	+0.4
2,253,579	-		Echvi_1918	0.80	+1.0
2,253,587	+		Echvi_1918	0.81	+0.0
2,253,670	-		Echvi_1918	0.89	-1.2
2,253,683	+		Echvi_1918	0.90	+1.5
2,253,683	+		Echvi_1918	0.90	+1.4
2,253,683	+		Echvi_1918	0.90	-0.7
2,253,698	+				+1.7
2,253,699	-				+0.3
2,253,699	-				+0.4
2,253,766	+				+0.7
2,253,767	-				+0.1
2,253,797	+				-0.1
2,253,797	+				-0.3
2,253,797	+				+0.0
2,253,798	-				-0.3
2,253,798	-				-0.3
2,253,801	+				+0.5
2,253,802	-				+1.2
2,253,802	-				+0.2
2,253,833	+				+0.4
2,253,860	-				+0.4
2,253,860	-				+1.7
2,253,931	+				+1.7
2,253,931	+				-1.2
2,253,932	-				-2.0
2,253,954	-				-0.7
2,254,080	+				-1.4
2,254,080	+				+1.0
2,254,133	-				+1.1
2,254,148	+				+0.5
2,254,148	+				+2.5
2,254,148	+				-0.1
2,254,149	-				-0.7
2,254,150	+				-0.2
2,254,151	-				+1.5
2,254,207	+				-0.5
2,254,208	-				+0.1
2,254,208	-				+1.7
2,254,214	+				+0.9
2,254,214	+				+1.0
2,254,217	+				+0.5
2,254,217	+				+0.7
2,254,218	-				-0.5
2,254,218	-				+0.0
2,254,218	-				+0.2
2,254,271	+				+0.9
2,254,272	-				+0.6
2,254,272	-				+1.5
2,254,272	-				+1.2
2,254,272	-				+1.0
2,254,316	+		Echvi_1919	0.11	-1.1
2,254,317	-		Echvi_1919	0.11	-0.1
2,254,317	-		Echvi_1919	0.11	-0.7
2,254,400	+		Echvi_1919	0.12	-2.5
2,254,413	+		Echvi_1919	0.13	-1.0
2,254,428	-		Echvi_1919	0.13	-1.0
2,254,448	+		Echvi_1919	0.13	-2.0
2,254,449	-		Echvi_1919	0.13	+0.0
2,254,449	-		Echvi_1919	0.13	-0.5
2,254,457	-		Echvi_1919	0.14	+0.9
2,254,542	+		Echvi_1919	0.15	+0.5
2,254,543	-		Echvi_1919	0.15	+0.2
2,254,592	+		Echvi_1919	0.16	-0.5
2,254,687	+		Echvi_1919	0.18	-1.9
2,254,761	+		Echvi_1919	0.20	-0.6
2,254,761	+		Echvi_1919	0.20	-0.1
2,254,941	+		Echvi_1919	0.23	+2.5
2,254,976	+		Echvi_1919	0.24	+0.4
2,254,987	-		Echvi_1919	0.24	-1.5
2,255,022	+		Echvi_1919	0.25	-0.4
2,255,022	+		Echvi_1919	0.25	+0.5
2,255,022	+		Echvi_1919	0.25	-0.0
2,255,022	+		Echvi_1919	0.25	-0.0
2,255,022	+		Echvi_1919	0.25	-0.0
2,255,077	+		Echvi_1919	0.26	+1.2
2,255,077	+		Echvi_1919	0.26	-0.7
2,255,202	+		Echvi_1919	0.29	+1.0
2,255,203	-		Echvi_1919	0.29	-0.2
2,255,203	-		Echvi_1919	0.29	-0.3
2,255,203	-		Echvi_1919	0.29	+1.3
2,255,203	-				+1.0
2,255,203	-		Echvi_1919	0.29	-1.4
2,255,204	+		Echvi_1919	0.29	+0.3
2,255,205	-		Echvi_1919	0.29	+0.1
2,255,205	-		Echvi_1919	0.29	-0.5
2,255,256	-		Echvi_1919	0.30	-0.1
2,255,307	-		Echvi_1919	0.31	-1.9
2,255,309	-		Echvi_1919	0.31	-0.5
2,255,380	+		Echvi_1919	0.32	+0.2
2,255,381	-		Echvi_1919	0.32	+1.0
2,255,381	-		Echvi_1919	0.32	-1.7
2,255,384	+		Echvi_1919	0.32	+0.6
2,255,385	-		Echvi_1919	0.32	+2.2
2,255,452	+		Echvi_1919	0.34	-1.6
2,255,452	+		Echvi_1919	0.34	+0.4
2,255,509	+		Echvi_1919	0.35	+0.0
2,255,594	+		Echvi_1919	0.37	-1.8
2,255,594	+		Echvi_1919	0.37	+0.5
2,255,595	-		Echvi_1919	0.37	-0.4
2,255,595	-		Echvi_1919	0.37	+1.4
2,255,595	-		Echvi_1919	0.37	-0.9
2,255,595	-		Echvi_1919	0.37	+4.0
2,255,600	+		Echvi_1919	0.37	-1.2
2,255,735	+		Echvi_1919	0.40	+0.7
2,255,879	+		Echvi_1919	0.42	-0.2
2,255,949	-		Echvi_1919	0.44	+0.2
2,255,964	+		Echvi_1919	0.44	-1.1
2,255,964	+		Echvi_1919	0.44	-0.1
2,256,012	+		Echvi_1919	0.45	-1.0
2,256,013	-		Echvi_1919	0.45	+0.1
2,256,018	+		Echvi_1919	0.45	-1.6
2,256,018	+		Echvi_1919	0.45	-1.6
2,256,078	+		Echvi_1919	0.46	-1.0
2,256,097	+		Echvi_1919	0.47	+0.9
2,256,098	-		Echvi_1919	0.47	+0.6
2,256,130	-		Echvi_1919	0.48	-1.5
2,256,130	-		Echvi_1919	0.48	-1.3
2,256,160	+		Echvi_1919	0.48	-1.3
2,256,184	-		Echvi_1919	0.49	-1.2
2,256,184	-		Echvi_1919	0.49	+0.1
2,256,293	-		Echvi_1919	0.51	-1.2
2,256,320	+		Echvi_1919	0.51	-0.2
2,256,320	+		Echvi_1919	0.51	+1.8
2,256,321	-		Echvi_1919	0.51	-0.6
2,256,322	+		Echvi_1919	0.51	+3.0
2,256,322	+		Echvi_1919	0.51	+0.5
2,256,322	+		Echvi_1919	0.51	-0.1
2,256,322	+		Echvi_1919	0.51	+0.8
2,256,322	+		Echvi_1919	0.51	+0.0
2,256,323	-		Echvi_1919	0.51	-0.2
2,256,323	-		Echvi_1919	0.51	-0.9
2,256,385	-		Echvi_1919	0.53	+0.0
2,256,806	+		Echvi_1919	0.61	-0.5
2,256,841	+		Echvi_1919	0.62	-1.0
2,256,842	-		Echvi_1919	0.62	+0.1
2,256,896	+		Echvi_1919	0.63	+0.4
2,256,988	+		Echvi_1919	0.65	+0.6
2,256,989	-		Echvi_1919	0.65	+0.5
2,256,989	-		Echvi_1919	0.65	+0.6
2,257,012	-		Echvi_1919	0.65	+0.1
2,257,012	-		Echvi_1919	0.65	+1.8
2,257,018	-		Echvi_1919	0.66	-1.4
2,257,053	+		Echvi_1919	0.66	-2.0
2,257,054	-		Echvi_1919	0.66	+0.7
2,257,065	-		Echvi_1919	0.66	-1.0
2,257,065	-		Echvi_1919	0.66	-0.9
2,257,093	+		Echvi_1919	0.67	+0.4
2,257,093	+		Echvi_1919	0.67	-0.0
2,257,093	+		Echvi_1919	0.67	-0.4
2,257,093	+		Echvi_1919	0.67	-0.4
2,257,094	-		Echvi_1919	0.67	-0.2
2,257,094	-		Echvi_1919	0.67	+0.0
2,257,094	-		Echvi_1919	0.67	-2.3
2,257,101	+		Echvi_1919	0.67	-3.3
2,257,101	+		Echvi_1919	0.67	+0.2
2,257,133	+		Echvi_1919	0.68	-1.7
2,257,159	+		Echvi_1919	0.68	-0.9
2,257,159	+		Echvi_1919	0.68	+2.0
2,257,160	-		Echvi_1919	0.68	-0.4
2,257,181	+		Echvi_1919	0.69	+0.4
2,257,182	-		Echvi_1919	0.69	+0.3
2,257,279	+		Echvi_1919	0.71	-1.0
2,257,280	-		Echvi_1919	0.71	-0.2
2,257,459	+		Echvi_1919	0.74	-0.4
2,257,459	+		Echvi_1919	0.74	-0.2
2,257,460	-		Echvi_1919	0.74	-2.4
2,257,460	-		Echvi_1919	0.74	-0.0
2,257,735	+		Echvi_1919	0.80	+0.5
2,257,735	+		Echvi_1919	0.80	-0.7
2,257,736	-		Echvi_1919	0.80	+0.1
2,257,798	+		Echvi_1919	0.81	-0.3
2,257,850	+		Echvi_1919	0.82	+0.3
2,257,850	+		Echvi_1919	0.82	+0.2
2,257,883	-		Echvi_1919	0.83	-1.5
2,257,883	-		Echvi_1919	0.83	-0.3
2,257,909	+		Echvi_1919	0.84	-1.0
2,257,922	-		Echvi_1919	0.84	-0.0
2,257,922	-		Echvi_1919	0.84	+0.2
2,257,986	+		Echvi_1919	0.85	-0.6
2,257,987	-		Echvi_1919	0.85	+0.4
2,258,040	+		Echvi_1919	0.86	-2.3
2,258,063	+		Echvi_1919	0.87	-0.0
2,258,063	+		Echvi_1919	0.87	+0.0
2,258,064	-		Echvi_1919	0.87	+0.1
2,258,089	+		Echvi_1919	0.87	-1.3
2,258,183	+		Echvi_1919	0.89	-0.6
2,258,184	-		Echvi_1919	0.89	+0.1
2,258,184	-		Echvi_1919	0.89	+0.2
2,258,184	-		Echvi_1919	0.89	+0.0
2,258,184	-		Echvi_1919	0.89	+0.8
2,258,184	-		Echvi_1919	0.89	-1.8
2,258,184	-		Echvi_1919	0.89	-1.6
2,258,185	+		Echvi_1919	0.89	-1.1
2,258,222	-		Echvi_1919	0.90	+0.7
2,258,263	+				+0.6
2,258,352	-				+0.7
2,258,437	-				-1.9
2,258,500	+				-0.2
2,258,500	+				+1.0
2,258,500	+				-0.7
2,258,501	-				+0.9
2,258,504	+				-1.3
2,258,505	-				-0.1
2,258,531	+				+1.0
2,258,552	+				-0.1
2,258,634	+				-0.5
2,258,757	-				+1.2
2,258,833	+				+1.0
2,258,969	+				-1.0
2,258,969	+				-0.6
2,258,969	+				-0.6
2,258,970	-				+2.0
2,258,970	-				-0.4
2,258,992	+				-2.6
2,258,997	+				+0.1
2,259,029	+				-0.1
2,259,109	+				-0.7
2,259,113	-				-1.8
2,259,135	-				+1.0
2,259,188	+				-1.2
2,259,209	+				-0.3
2,259,210	-				+2.3
2,259,248	-		Echvi_1920	0.11	+0.5
2,259,435	+		Echvi_1920	0.20	-0.9
2,259,436	-		Echvi_1920	0.20	+1.5
2,259,436	-		Echvi_1920	0.20	-2.2
2,259,678	+		Echvi_1920	0.31	-0.0
2,259,679	-		Echvi_1920	0.31	-0.6
2,259,710	+		Echvi_1920	0.33	+1.3