Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1860

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
2,177,662	+				+1.1
2,177,673	+				+0.5
2,177,691	+				-1.4
2,177,831	+				+0.7
2,177,831	+				-1.2
2,177,831	+				+0.4
2,177,832	-				+0.8
2,177,841	-				-0.3
2,177,841	-				+0.0
2,177,970	-				+1.0
2,177,992	+		Echvi_1860	0.10	+0.1
2,178,022	+		Echvi_1860	0.11	-0.0
2,178,023	-		Echvi_1860	0.11	+0.1
2,178,062	-		Echvi_1860	0.13	+1.2
2,178,077	+		Echvi_1860	0.13	-0.4
2,178,248	+		Echvi_1860	0.19	-0.5
2,178,301	-		Echvi_1860	0.21	+1.4
2,178,327	+		Echvi_1860	0.22	+0.7
2,178,327	+		Echvi_1860	0.22	+0.0
2,178,328	-		Echvi_1860	0.22	-1.5
2,178,332	+		Echvi_1860	0.22	-1.0
2,178,332	+		Echvi_1860	0.22	+0.5
2,178,332	+		Echvi_1860	0.22	-1.5
2,178,332	+		Echvi_1860	0.22	-0.5
2,178,332	+		Echvi_1860	0.22	-0.1
2,178,332	+		Echvi_1860	0.22	+1.2
2,178,333	-		Echvi_1860	0.22	-1.6
2,178,333	-		Echvi_1860	0.22	+0.4
2,178,333	-		Echvi_1860	0.22	-0.9
2,178,333	-		Echvi_1860	0.22	-1.5
2,178,333	-		Echvi_1860	0.22	-1.6
2,178,333	-		Echvi_1860	0.22	+0.8
2,178,333	-		Echvi_1860	0.22	+0.2
2,178,333	-		Echvi_1860	0.22	-0.7
2,178,333	-		Echvi_1860	0.22	-1.5
2,178,333	-		Echvi_1860	0.22	+0.3
2,178,334	+		Echvi_1860	0.22	+1.1
2,178,334	+		Echvi_1860	0.22	-0.7
2,178,334	+		Echvi_1860	0.22	-0.6
2,178,335	-		Echvi_1860	0.22	+0.4
2,178,335	-		Echvi_1860	0.22	-3.3
2,178,337	-		Echvi_1860	0.22	-1.4
2,178,353	-		Echvi_1860	0.23	-0.7
2,178,353	-		Echvi_1860	0.23	-3.1
2,178,353	-		Echvi_1860	0.23	+0.0
2,178,354	+		Echvi_1860	0.23	-0.6
2,178,355	-		Echvi_1860	0.23	+1.5
2,178,382	-		Echvi_1860	0.24	+0.8
2,178,388	+		Echvi_1860	0.24	-0.0
2,178,426	-		Echvi_1860	0.25	-0.6
2,178,515	+		Echvi_1860	0.28	+1.1
2,178,515	+		Echvi_1860	0.28	+0.3
2,178,515	+		Echvi_1860	0.28	+0.4
2,178,515	+		Echvi_1860	0.28	+1.0
2,178,516	-		Echvi_1860	0.28	+0.2
2,178,520	+		Echvi_1860	0.28	+0.7
2,178,520	+		Echvi_1860	0.28	+1.1
2,178,521	-		Echvi_1860	0.28	-0.5
2,178,522	+		Echvi_1860	0.28	-0.8
2,178,522	+		Echvi_1860	0.28	-0.5
2,178,523	-		Echvi_1860	0.28	+0.1
2,178,523	-		Echvi_1860	0.28	+0.2
2,178,523	-		Echvi_1860	0.28	-2.3
2,178,534	-		Echvi_1860	0.29	-2.4
2,178,534	-		Echvi_1860	0.29	+0.4
2,178,534	-		Echvi_1860	0.29	+1.0
2,178,657	-		Echvi_1860	0.33	-0.9
2,178,771	-		Echvi_1860	0.37	+0.1
2,178,788	+		Echvi_1860	0.37	+1.0
2,178,887	+		Echvi_1860	0.41	-0.2
2,178,888	-		Echvi_1860	0.41	+2.6
2,178,896	+		Echvi_1860	0.41	-0.3
2,178,897	-		Echvi_1860	0.41	-0.1
2,178,897	-		Echvi_1860	0.41	-0.1
2,178,904	+		Echvi_1860	0.41	+0.9
2,178,945	-		Echvi_1860	0.43	-1.2
2,178,953	+		Echvi_1860	0.43	+0.4
2,178,953	+		Echvi_1860	0.43	+0.2
2,178,953	+		Echvi_1860	0.43	-1.7
2,178,954	-		Echvi_1860	0.43	-1.7
2,178,954	-		Echvi_1860	0.43	-0.4
2,178,954	-		Echvi_1860	0.43	+1.0
2,178,976	+		Echvi_1860	0.44	-1.4
2,178,977	-		Echvi_1860	0.44	+0.6
2,179,020	+		Echvi_1860	0.45	+0.7
2,179,027	-		Echvi_1860	0.46	+3.0
2,179,071	+		Echvi_1860	0.47	-1.1
2,179,072	-		Echvi_1860	0.47	+1.0
2,179,075	+		Echvi_1860	0.47	+1.1
2,179,076	-		Echvi_1860	0.47	+1.5
2,179,076	-		Echvi_1860	0.47	+0.1
2,179,076	-		Echvi_1860	0.47	-0.8
2,179,076	-		Echvi_1860	0.47	+0.7
2,179,077	+		Echvi_1860	0.47	+0.3
2,179,077	+		Echvi_1860	0.47	-0.2
2,179,078	-		Echvi_1860	0.47	+0.1
2,179,078	-		Echvi_1860	0.47	-0.8
2,179,078	-		Echvi_1860	0.47	+0.4
2,179,078	-		Echvi_1860	0.47	+1.6
2,179,081	+		Echvi_1860	0.47	+0.4
2,179,081	+		Echvi_1860	0.47	-0.6
2,179,081	+		Echvi_1860	0.47	-0.8
2,179,081	+		Echvi_1860	0.47	-0.2
2,179,081	+		Echvi_1860	0.47	+0.3
2,179,082	-		Echvi_1860	0.47	-0.6
2,179,082	-		Echvi_1860	0.47	-0.3
2,179,082	-		Echvi_1860	0.47	-1.2
2,179,083	+		Echvi_1860	0.48	+0.9
2,179,083	+		Echvi_1860	0.48	+0.4
2,179,084	-		Echvi_1860	0.48	+0.3
2,179,097	+		Echvi_1860	0.48	+0.8
2,179,116	+		Echvi_1860	0.49	+2.0
2,179,116	+		Echvi_1860	0.49	-0.4
2,179,116	+		Echvi_1860	0.49	+0.7
2,179,165	+		Echvi_1860	0.50	-0.3
2,179,288	-		Echvi_1860	0.55	-0.9
2,179,292	+		Echvi_1860	0.55	-0.3
2,179,292	+		Echvi_1860	0.55	+0.0
2,179,292	+		Echvi_1860	0.55	+0.7
2,179,293	-		Echvi_1860	0.55	-0.4
2,179,293	-		Echvi_1860	0.55	+0.2
2,179,311	+		Echvi_1860	0.55	+1.2
2,179,311	+		Echvi_1860	0.55	-0.3
2,179,312	-		Echvi_1860	0.55	+1.3
2,179,312	-		Echvi_1860	0.55	+1.4
2,179,320	-		Echvi_1860	0.56	+0.6
2,179,320	-		Echvi_1860	0.56	-0.1
2,179,322	-		Echvi_1860	0.56	+0.1
2,179,365	-		Echvi_1860	0.57	-1.2
2,179,492	-		Echvi_1860	0.61	+0.4
2,179,516	+		Echvi_1860	0.62	-0.3
2,179,516	+		Echvi_1860	0.62	+0.3
2,179,516	+		Echvi_1860	0.62	+0.5
2,179,517	-		Echvi_1860	0.62	-1.3
2,179,520	-		Echvi_1860	0.62	-0.6
2,179,561	-		Echvi_1860	0.64	-0.6
2,179,676	-		Echvi_1860	0.68	+2.1
2,179,677	+		Echvi_1860	0.68	+0.8
2,179,714	+		Echvi_1860	0.69	-0.2
2,179,745	-		Echvi_1860	0.70	+2.0
2,179,773	+		Echvi_1860	0.71	-0.7
2,179,774	-		Echvi_1860	0.71	-1.0
2,179,774	-		Echvi_1860	0.71	+0.3
2,179,782	-		Echvi_1860	0.71	-0.4
2,179,782	-		Echvi_1860	0.71	+1.0
2,179,919	+		Echvi_1860	0.76	-1.6
2,179,919	+		Echvi_1860	0.76	+2.7
2,179,919	+		Echvi_1860	0.76	-0.4
2,179,920	-		Echvi_1860	0.76	+0.4
2,179,920	-		Echvi_1860	0.76	-0.9
2,179,920	-		Echvi_1860	0.76	-1.5
2,179,927	+		Echvi_1860	0.76	-1.2
2,179,927	+		Echvi_1860	0.76	+0.0
2,179,928	-		Echvi_1860	0.76	+0.9
2,179,928	-		Echvi_1860	0.76	-2.4
2,180,060	-		Echvi_1860	0.81	+1.2
2,180,066	+		Echvi_1860	0.81	-0.9
2,180,066	+		Echvi_1860	0.81	+0.7
2,180,067	-		Echvi_1860	0.81	-0.3
2,180,069	+		Echvi_1860	0.81	+1.3
2,180,070	-		Echvi_1860	0.81	-0.1
2,180,094	+		Echvi_1860	0.82	+1.0
2,180,094	+		Echvi_1860	0.82	-0.4
2,180,094	+		Echvi_1860	0.82	+1.1
2,180,094	+		Echvi_1860	0.82	+0.8
2,180,096	+		Echvi_1860	0.82	+0.2
2,180,096	+		Echvi_1860	0.82	-0.1
2,180,096	+		Echvi_1860	0.82	+1.7
2,180,096	+		Echvi_1860	0.82	-0.1
2,180,096	+		Echvi_1860	0.82	+0.8
2,180,096	+		Echvi_1860	0.82	+0.2
2,180,096	+		Echvi_1860	0.82	+1.2
2,180,096	+		Echvi_1860	0.82	+0.6
2,180,097	-		Echvi_1860	0.82	+0.2
2,180,097	-		Echvi_1860	0.82	-1.0
2,180,097	-		Echvi_1860	0.82	+1.3
2,180,097	-		Echvi_1860	0.82	-1.6
2,180,097	-		Echvi_1860	0.82	+1.2
2,180,108	+		Echvi_1860	0.82	+1.5
2,180,108	+		Echvi_1860	0.82	-0.9
2,180,117	+		Echvi_1860	0.83	+0.6
2,180,118	-				-0.0
2,180,118	-		Echvi_1860	0.83	+1.0
2,180,146	-		Echvi_1860	0.84	+0.7
2,180,158	+		Echvi_1860	0.84	+1.2
2,180,159	-		Echvi_1860	0.84	+1.0
2,180,177	+		Echvi_1860	0.85	-2.6
2,180,178	-		Echvi_1860	0.85	-0.7
2,180,178	-		Echvi_1860	0.85	+0.5
2,180,273	+		Echvi_1860	0.88	+0.4
2,180,274	-		Echvi_1860	0.88	+1.4
2,180,370	-				-0.2
2,180,382	-				+0.2
2,180,426	-				-0.5
2,180,435	+				-0.6
2,180,435	+				+0.8
2,180,450	-				+0.2
2,180,457	+				+0.2
2,180,457	+				+0.9
2,180,509	+				-0.5
2,180,509	+				-0.1
2,180,510	-				+1.1
2,180,530	+				-0.1
2,180,530	+				-0.2
2,180,530	+				+0.3
2,180,533	+				+0.0
2,180,534	-				-0.5
2,180,593	+				+0.4
2,180,593	+				+0.3
2,180,594	-				-0.3
2,180,594	-				-1.2
2,180,597	+				-0.9
2,180,649	-				+3.2
2,180,660	+				-0.3
2,180,664	-				+1.1
2,180,744	-				+0.5
2,180,761	+				+0.1
2,180,771	-				+0.9
2,180,771	-				+1.3
2,180,794	+				-0.0
2,180,795	-				+2.3
2,180,806	-				+1.0
2,180,820	-				+0.6
2,180,841	-				-0.1
2,180,864	-				+0.1
2,180,868	-				-0.6
2,180,868	-				-0.0
2,180,871	-				+1.2
2,181,117	+				-0.4
2,181,117	+				-0.8
2,181,118	-				+0.2
2,181,118	-				+1.0
2,181,121	-				+0.9
2,181,128	+				-2.4
2,181,128	+				+0.4
2,181,129	-				+0.9
2,181,130	+				-0.1
2,181,131	-				-0.1
2,181,131	-				+0.9
2,181,158	+				-1.4
2,181,166	+				-2.9
2,181,166	+				-1.8
2,181,167	-				+1.9
2,181,170	-				+1.4
2,181,195	-				+0.2
2,181,285	+				+0.3
2,181,285	+				+0.7
2,181,285	+				-0.7
2,181,285	+				-0.5
2,181,289	+				-0.7
2,181,289	+				+0.4
2,181,289	+				-0.5
2,181,290	-				+0.5
2,181,292	+				-0.3
2,181,293	-				+1.3
2,181,293	-				+1.1
2,181,293	-				+1.7
2,181,293	-				+1.2
2,181,295	+				+0.5
2,181,296	-				+1.4
2,181,303	+				-1.1
2,181,303	+				+1.4
2,181,304	-				+3.0
2,181,304	-				+1.4
2,181,304	-				-0.2
2,181,304	-				+1.4
2,181,358	+				-0.8
2,181,359	-				+0.1
2,181,412	+		Echvi_1861	0.14	+0.2
2,181,412	+		Echvi_1861	0.14	-0.6
2,181,412	+		Echvi_1861	0.14	-1.0
2,181,464	+		Echvi_1861	0.19	-0.8
2,181,465	-		Echvi_1861	0.19	-0.8
2,181,465	-		Echvi_1861	0.19	+0.2
2,181,467	-		Echvi_1861	0.20	-0.0
2,181,497	-		Echvi_1861	0.23	-0.8
2,181,541	-		Echvi_1861	0.27	-0.6
2,181,541	-		Echvi_1861	0.27	+1.2
2,181,601	+		Echvi_1861	0.33	+0.2
2,181,602	-		Echvi_1861	0.33	+0.3