Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1818

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
2,134,959	-		Echvi_1816	0.45	-1.9
2,135,107	+		Echvi_1816	0.75	-0.0
2,135,116	-		Echvi_1816	0.77	-0.8
2,135,142	-		Echvi_1816	0.82	-0.1
2,135,195	+				-1.4
2,135,202	+				-1.6
2,135,216	+				+1.0
2,135,216	+				-0.8
2,135,217	-				+0.0
2,135,217	-				-0.4
2,135,217	-				-0.4
2,135,224	+				-1.0
2,135,225	-				+1.5
2,135,236	+				-1.3
2,135,236	+				+1.0
2,135,236	+				+0.8
2,135,237	-				-1.0
2,135,251	+				-0.4
2,135,251	+				-0.2
2,135,251	+				+1.0
2,135,259	+				-0.7
2,135,269	+				+1.0
2,135,269	+				-0.0
2,135,292	-				-0.4
2,135,315	+		Echvi_1817	0.13	-0.6
2,135,316	-		Echvi_1817	0.13	-1.6
2,135,339	+		Echvi_1817	0.16	-0.8
2,135,339	+		Echvi_1817	0.16	+0.6
2,135,340	-		Echvi_1817	0.16	-0.5
2,135,340	-		Echvi_1817	0.16	-1.4
2,135,348	-		Echvi_1817	0.18	+0.2
2,135,428	-		Echvi_1817	0.30	-0.0
2,135,494	-		Echvi_1817	0.40	+0.4
2,135,565	+		Echvi_1817	0.51	-0.8
2,135,747	+		Echvi_1817	0.79	-0.1
2,135,835	+				-2.1
2,135,836	-				-1.0
2,135,836	-				+0.1
2,135,836	-				-0.8
2,135,839	+				-0.7
2,135,882	-				+1.4
2,135,931	+				-0.9
2,135,961	+				-0.3
2,135,972	+		Echvi_1818	0.11	+0.1
2,135,972	+		Echvi_1818	0.11	+0.3
2,135,973	-		Echvi_1818	0.11	+0.4
2,135,973	-		Echvi_1818	0.11	+1.3
2,135,973	-		Echvi_1818	0.11	-0.8
2,136,012	+		Echvi_1818	0.16	+0.3
2,136,085	-		Echvi_1818	0.25	-0.3
2,136,085	-		Echvi_1818	0.25	+0.4
2,136,144	+		Echvi_1818	0.33	+0.6
2,136,183	+		Echvi_1818	0.38	-0.9
2,136,184	-		Echvi_1818	0.38	+0.4
2,136,271	+		Echvi_1818	0.49	-0.3
2,136,271	+		Echvi_1818	0.49	-1.2
2,136,272	-		Echvi_1818	0.49	-0.5
2,136,273	+		Echvi_1818	0.50	-0.7
2,136,317	+		Echvi_1818	0.55	-2.4
2,136,414	+		Echvi_1818	0.68	+1.0
2,136,430	+		Echvi_1818	0.70	-0.4
2,136,430	+		Echvi_1818	0.70	-0.5
2,136,430	+		Echvi_1818	0.70	-1.0
2,136,431	-		Echvi_1818	0.70	+0.3
2,136,473	+		Echvi_1818	0.75	+0.2
2,136,550	+		Echvi_1818	0.85	+0.4
2,136,616	+				-1.6
2,136,684	-				-0.8
2,136,688	+				-1.4
2,136,689	-				+1.0
2,136,689	-				+0.2
2,136,713	-				-1.5
2,136,797	-		Echvi_1819	0.13	-0.4
2,136,797	-		Echvi_1819	0.13	+0.4
2,136,973	-		Echvi_1819	0.35	+0.5
2,136,973	-		Echvi_1819	0.35	-1.0
2,136,976	+		Echvi_1819	0.36	-0.2
2,136,977	-		Echvi_1819	0.36	+0.0
2,137,008	+		Echvi_1819	0.40	-1.4
2,137,008	+		Echvi_1819	0.40	-0.2
2,137,008	+		Echvi_1819	0.40	-2.0
2,137,008	+		Echvi_1819	0.40	+0.3
2,137,008	+		Echvi_1819	0.40	+2.0
2,137,009	-		Echvi_1819	0.40	-1.9
2,137,009	-		Echvi_1819	0.40	-1.0
2,137,019	-		Echvi_1819	0.41	-0.4
2,137,087	-		Echvi_1819	0.50	+2.0
2,137,121	+		Echvi_1819	0.54	-0.0
2,137,122	-		Echvi_1819	0.54	-1.4
2,137,166	+		Echvi_1819	0.60	-0.0
2,137,167	-		Echvi_1819	0.60	-0.7
2,137,171	-		Echvi_1819	0.61	-3.6
2,137,171	-		Echvi_1819	0.61	-0.9
2,137,171	-		Echvi_1819	0.61	-2.2
2,137,178	+		Echvi_1819	0.62	-2.3
2,137,179	-		Echvi_1819	0.62	-0.7
2,137,265	+		Echvi_1819	0.73	-0.0
2,137,266	-		Echvi_1819	0.73	-1.5
2,137,444	+				+1.1
2,137,445	-				-1.0
2,137,445	-				+1.0
2,137,463	+				+0.6
2,137,493	+				-1.0
2,137,493	+				+1.1
2,137,493	+				+1.7
2,137,503	+				+0.6
2,137,594	-		Echvi_1820	0.15	+0.4
2,137,594	-		Echvi_1820	0.15	+0.8