Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1695

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
1,985,438	+				-0.2
1,985,536	+				-1.9
1,985,537	-				+0.2
1,985,598	+				-0.5
1,985,601	+				-1.0
1,985,602	-				+0.6
1,985,602	-				-0.0
1,985,694	+				+1.0
1,985,766	+		Echvi_1694	0.12	-1.2
1,985,766	+		Echvi_1694	0.12	+0.2
1,985,767	-		Echvi_1694	0.13	+0.8
1,985,767	-		Echvi_1694	0.13	-0.0
1,985,767	-		Echvi_1694	0.13	-1.5
1,985,767	-		Echvi_1694	0.13	+0.5
1,985,767	-		Echvi_1694	0.13	-0.1
1,985,772	+		Echvi_1694	0.13	+0.8
1,985,776	+		Echvi_1694	0.14	-1.9
1,985,776	+		Echvi_1694	0.14	-0.4
1,985,777	-		Echvi_1694	0.14	-0.3
1,985,779	+		Echvi_1694	0.14	+0.8
1,985,779	+		Echvi_1694	0.14	+0.7
1,985,858	+		Echvi_1694	0.26	-0.1
1,986,024	+		Echvi_1694	0.52	+0.9
1,986,100	+		Echvi_1694	0.63	-0.2
1,986,211	-		Echvi_1694	0.80	+1.1
1,986,211	-		Echvi_1694	0.80	-0.3
1,986,211	-		Echvi_1694	0.80	+1.4
1,986,238	+		Echvi_1694	0.84	+1.7
1,986,317	+				+1.2
1,986,317	+				-0.2
1,986,338	+				-0.7
1,986,339	-				+0.4
1,986,339	-				+0.3
1,986,397	+				-0.4
1,986,397	+				+0.5
1,986,397	+				-1.0
1,986,398	-				-1.3
1,986,399	+				-0.0
1,986,413	+				-0.7
1,986,479	-				+1.0
1,986,499	+				+0.2
1,986,500	-				+2.6
1,986,587	+		Echvi_1695	0.13	+0.3
1,986,587	+		Echvi_1695	0.13	+0.3
1,986,588	-		Echvi_1695	0.13	+1.4
1,986,589	+		Echvi_1695	0.13	+0.9
1,986,590	-		Echvi_1695	0.13	+0.4
1,986,684	+		Echvi_1695	0.21	-0.8
1,986,687	+		Echvi_1695	0.21	+0.8
1,986,687	+		Echvi_1695	0.21	-0.3
1,986,688	-		Echvi_1695	0.21	+2.0
1,986,688	-		Echvi_1695	0.21	-0.1
1,986,688	-		Echvi_1695	0.21	-1.9
1,986,735	+		Echvi_1695	0.25	-1.3
1,986,780	+		Echvi_1695	0.28	+0.2
1,986,816	+		Echvi_1695	0.31	+0.4
1,986,823	+		Echvi_1695	0.32	-0.8
1,986,824	-		Echvi_1695	0.32	+0.7
1,986,824	-		Echvi_1695	0.32	-0.1
1,986,824	-		Echvi_1695	0.32	+0.7
1,986,859	-				-0.0
1,986,859	-		Echvi_1695	0.34	+0.8
1,986,921	-		Echvi_1695	0.39	+1.2
1,986,921	-		Echvi_1695	0.39	+2.4
1,987,060	+		Echvi_1695	0.50	-0.0
1,987,060	+		Echvi_1695	0.50	-0.2
1,987,064	-		Echvi_1695	0.50	-1.0
1,987,075	-		Echvi_1695	0.51	+0.6
1,987,211	+		Echvi_1695	0.62	+1.2
1,987,212	-		Echvi_1695	0.62	-1.7
1,987,212	-		Echvi_1695	0.62	+1.0
1,987,336	-		Echvi_1695	0.72	+0.9
1,987,346	-		Echvi_1695	0.72	-0.0
1,987,375	+		Echvi_1695	0.75	-2.0
1,987,375	+		Echvi_1695	0.75	+1.7
1,987,417	-		Echvi_1695	0.78	-0.1
1,987,637	-				+0.7
1,987,650	+				-0.0
1,987,661	+				-2.1
1,987,662	-				+0.1
1,987,803	+				+0.7
1,987,803	+				+1.3
1,987,855	-				+3.0
1,987,867	+				-1.5
1,987,868	-				-0.1
1,987,868	-				+2.8
1,987,877	-				+1.4
1,987,918	+				+0.3
1,987,918	+				-0.1
1,987,918	+				-1.9
1,988,313	-		Echvi_1696	0.35	+0.3
1,988,329	+		Echvi_1696	0.37	-0.2
1,988,330	-		Echvi_1696	0.37	-0.3
1,988,330	-		Echvi_1696	0.37	-0.5
1,988,330	-		Echvi_1696	0.37	+1.5
1,988,410	+		Echvi_1696	0.44	+0.4
1,988,410	+		Echvi_1696	0.44	-0.2
1,988,464	+		Echvi_1696	0.49	+0.5
1,988,465	-		Echvi_1696	0.49	+2.0
1,988,642	-		Echvi_1696	0.66	-1.0
1,988,642	-		Echvi_1696	0.66	-0.0
1,988,673	+		Echvi_1696	0.69	-0.8
1,988,673	+		Echvi_1696	0.69	-1.7
1,988,674	-		Echvi_1696	0.69	+0.2