Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1686

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
1,976,120	+		Echvi_1685	0.17	+0.1
1,976,121	-		Echvi_1685	0.17	+1.1
1,976,121	-		Echvi_1685	0.17	+0.4
1,976,207	+		Echvi_1685	0.25	+1.0
1,976,233	+		Echvi_1685	0.27	+1.3
1,976,233	+		Echvi_1685	0.27	-1.0
1,976,233	+		Echvi_1685	0.27	-0.2
1,976,472	+		Echvi_1685	0.48	-3.1
1,976,487	-		Echvi_1685	0.49	-0.6
1,976,523	-		Echvi_1685	0.52	+0.1
1,976,569	+		Echvi_1685	0.56	+0.1
1,976,569	+		Echvi_1685	0.56	-1.3
1,976,569	+		Echvi_1685	0.56	+1.8
1,976,569	+		Echvi_1685	0.56	+1.0
1,976,569	+		Echvi_1685	0.56	-0.1
1,976,570	-		Echvi_1685	0.56	-0.5
1,976,570	-		Echvi_1685	0.56	+0.3
1,976,590	+		Echvi_1685	0.58	-3.0
1,976,591	-		Echvi_1685	0.58	-0.1
1,976,627	-		Echvi_1685	0.61	+1.2
1,976,706	+		Echvi_1685	0.68	+0.1
1,976,752	-		Echvi_1685	0.72	+1.3
1,976,752	-		Echvi_1685	0.72	+0.5
1,976,752	-		Echvi_1685	0.72	+1.1
1,976,766	-		Echvi_1685	0.73	+1.1
1,976,812	+		Echvi_1685	0.77	-1.3
1,976,812	+		Echvi_1685	0.77	+0.6
1,976,812	+		Echvi_1685	0.77	-0.0
1,976,813	-		Echvi_1685	0.77	-1.3
1,976,813	-		Echvi_1685	0.77	-0.2
1,976,845	-		Echvi_1685	0.80	-0.6
1,976,913	-		Echvi_1685	0.85	+1.7
1,976,923	+		Echvi_1685	0.86	+1.7
1,976,924	-		Echvi_1685	0.86	-0.7
1,976,948	-		Echvi_1685	0.88	+0.0
1,976,948	-		Echvi_1685	0.88	+2.0
1,976,948	-		Echvi_1685	0.88	+2.6
1,976,990	-				+2.0
1,977,144	-				+2.1
1,977,144	-				+0.9
1,977,168	+				-1.6
1,977,169	-				+0.4
1,977,169	-				-0.0
1,977,311	+		Echvi_1686	0.21	+1.1
1,977,311	+		Echvi_1686	0.21	+2.0
1,977,312	-		Echvi_1686	0.21	-2.3
1,977,312	-		Echvi_1686	0.21	-0.5
1,977,438	+		Echvi_1686	0.32	-0.3
1,977,438	+		Echvi_1686	0.32	-0.5
1,977,464	+		Echvi_1686	0.34	-0.1
1,977,482	+		Echvi_1686	0.35	-0.9
1,977,508	+		Echvi_1686	0.38	-1.5
1,977,824	+		Echvi_1686	0.65	+0.3
1,977,865	+		Echvi_1686	0.68	+2.0
1,977,865	+		Echvi_1686	0.68	+1.1
1,977,865	+		Echvi_1686	0.68	+2.2
1,977,866	-		Echvi_1686	0.68	+1.2
1,977,867	+		Echvi_1686	0.68	-0.6
1,977,868	-		Echvi_1686	0.68	+0.5
1,977,868	-		Echvi_1686	0.68	+3.6
1,977,868	-		Echvi_1686	0.68	+0.5
1,977,868	-		Echvi_1686	0.68	-0.7
1,978,024	-		Echvi_1686	0.82	+0.4
1,978,024	-		Echvi_1686	0.82	+0.0
1,978,177	+				+0.4
1,978,217	-				+0.2
1,978,247	-				-0.3
1,978,251	+				-0.1
1,978,251	+				-0.3
1,978,252	-				-1.7
1,978,252	-				-1.6
1,978,252	-				-0.4
1,978,270	-				-1.0
1,978,284	+				-0.7
1,978,284	+				-1.8
1,978,294	-				+1.0
1,978,377	+				+0.4
1,978,399	+		Echvi_1687	0.11	+0.4
1,978,416	-		Echvi_1687	0.12	+1.0
1,978,464	+		Echvi_1687	0.17	-0.1
1,978,601	+		Echvi_1687	0.29	+0.8
1,978,602	-		Echvi_1687	0.29	+2.4
1,978,638	-		Echvi_1687	0.32	-0.3
1,978,698	+		Echvi_1687	0.37	+0.2
1,978,745	+		Echvi_1687	0.41	-0.4
1,978,863	+		Echvi_1687	0.52	-0.9
1,978,954	+		Echvi_1687	0.59	-0.2
1,978,955	-		Echvi_1687	0.60	+0.5
1,978,979	-		Echvi_1687	0.62	+0.6
1,979,000	+		Echvi_1687	0.64	-0.2
1,979,042	-				+2.0
1,979,162	-		Echvi_1687	0.78	+0.4
1,979,162	-		Echvi_1687	0.78	+0.7
1,979,162	-		Echvi_1687	0.78	-0.1
1,979,182	+		Echvi_1687	0.79	+0.8
1,979,182	+		Echvi_1687	0.79	+0.6
1,979,183	-		Echvi_1687	0.80	+0.1
1,979,185	-		Echvi_1687	0.80	+0.9
1,979,185	-		Echvi_1687	0.80	-0.1
1,979,185	-		Echvi_1687	0.80	-0.3
1,979,188	-		Echvi_1687	0.80	-0.0
1,979,188	-		Echvi_1687	0.80	+0.1