Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1596

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
1,835,578	-		Echvi_1595	0.19	-0.2
1,835,616	+		Echvi_1595	0.25	+1.0
1,835,616	+		Echvi_1595	0.25	+0.2
1,835,617	-		Echvi_1595	0.25	-2.0
1,835,624	-		Echvi_1595	0.26	+0.0
1,835,624	-		Echvi_1595	0.26	-2.3
1,835,844	+		Echvi_1595	0.60	+1.0
1,835,845	-		Echvi_1595	0.60	+0.8
1,835,845	-		Echvi_1595	0.60	+0.4
1,835,881	-		Echvi_1595	0.66	-1.2
1,835,910	+		Echvi_1595	0.71	-1.7
1,835,958	-		Echvi_1595	0.78	+0.1
1,835,964	+		Echvi_1595	0.79	-0.4
1,835,965	-		Echvi_1595	0.79	+0.0
1,835,965	-		Echvi_1595	0.79	+0.6
1,835,965	-		Echvi_1595	0.79	+0.8
1,835,965	-		Echvi_1595	0.79	-0.3
1,835,965	-		Echvi_1595	0.79	+0.7
1,835,965	-		Echvi_1595	0.79	-0.8
1,835,965	-		Echvi_1595	0.79	-2.4
1,836,012	-		Echvi_1595	0.86	-0.9
1,836,062	+				-0.4
1,836,093	+				-1.9
1,836,094	-				-0.2
1,836,094	-				+0.0
1,836,094	-				+0.1
1,836,094	-				-0.3
1,836,126	-				+0.4
1,836,126	-				-0.0
1,836,126	-				-0.3
1,836,142	+				-0.4
1,836,142	+				-1.8
1,836,148	-				-0.0
1,836,152	-				+0.6
1,836,154	-				-1.3
1,836,177	-				+0.7
1,836,280	+				+0.8
1,836,280	+				-0.5
1,836,280	+				+0.5
1,836,284	+				+0.7
1,836,284	+				+1.1
1,836,327	-				-0.1
1,836,373	+				-0.5
1,836,419	+				+0.0
1,836,419	+				+0.7
1,836,428	+				-1.0
1,836,456	+				+0.6
1,836,476	+				+1.1
1,836,516	+				-0.8
1,836,523	+				-0.8
1,836,523	+				-0.1
1,836,524	-				-0.3
1,836,531	+				-0.1
1,836,533	+				+0.2
1,836,533	+				+0.1
1,836,533	+				+1.0
1,836,533	+				+0.4
1,836,656	+		Echvi_1596	0.30	+0.0
1,836,656	+		Echvi_1596	0.30	-0.5
1,836,656	+		Echvi_1596	0.30	-0.0
1,836,657	-		Echvi_1596	0.30	+2.2
1,836,709	-		Echvi_1596	0.41	+0.5
1,836,709	-		Echvi_1596	0.41	+1.0
1,836,709	-		Echvi_1596	0.41	+0.6
1,836,725	+		Echvi_1596	0.45	+0.6
1,836,783	+		Echvi_1596	0.57	+1.0
1,836,841	+		Echvi_1596	0.69	+0.3
1,836,880	+		Echvi_1596	0.78	+1.0
1,836,923	+		Echvi_1596	0.87	+2.3
1,836,923	+		Echvi_1596	0.87	+0.6
1,836,924	-		Echvi_1596	0.87	+2.0
1,836,987	+				+2.0
1,836,988	-				-0.3
1,837,013	-				-0.8
1,837,013	-				+0.0
1,837,015	-				+0.3
1,837,026	+				+1.7
1,837,029	-				+1.3
1,837,130	+				-0.3
1,837,131	-				+0.2
1,837,131	-				+0.7
1,837,181	+				-2.5
1,837,184	+				+0.6
1,837,184	+				+0.1
1,837,184	+				-0.1
1,837,184	+				+0.3
1,837,185	-				-0.8
1,837,185	-				-0.8
1,837,185	-				+0.2
1,837,185	-				-1.4
1,837,185	-				-0.1
1,837,185	-				+0.3
1,837,191	+				+0.4
1,837,191	+				+1.0
1,837,192	-				-0.5
1,837,203	-				-0.3
1,837,203	-				-0.5
1,837,231	+				+1.0
1,837,272	-				-0.6
1,837,313	+				+3.3
1,837,408	+				+0.9
1,837,408	+				-1.0
1,837,465	-				+0.1
1,837,499	+				-0.8
1,837,533	-		Echvi_1597	0.12	-1.2
1,837,545	+		Echvi_1597	0.12	+0.3
1,837,627	+		Echvi_1597	0.17	-0.0
1,837,627	+		Echvi_1597	0.17	-2.2
1,837,638	-		Echvi_1597	0.17	-1.1
1,837,687	+		Echvi_1597	0.20	+0.9
1,837,693	-		Echvi_1597	0.20	-0.2
1,837,696	-		Echvi_1597	0.21	+0.4
1,837,735	-		Echvi_1597	0.23	+0.2
1,837,740	+		Echvi_1597	0.23	+0.9
1,837,740	+		Echvi_1597	0.23	-0.8
1,837,767	+		Echvi_1597	0.24	+0.7
1,837,767	+		Echvi_1597	0.24	-0.1
1,837,767	+		Echvi_1597	0.24	-0.2
1,837,855	+		Echvi_1597	0.29	-0.6
1,837,860	+		Echvi_1597	0.29	-0.1
1,837,863	-		Echvi_1597	0.30	+0.6
1,837,863	-		Echvi_1597	0.30	+1.0
1,837,863	-		Echvi_1597	0.30	-1.2
1,837,874	+		Echvi_1597	0.30	-0.0
1,837,874	+		Echvi_1597	0.30	-0.9
1,837,875	-		Echvi_1597	0.30	+0.7
1,837,876	+		Echvi_1597	0.30	+0.3
1,837,877	-		Echvi_1597	0.30	-2.0
1,837,877	-		Echvi_1597	0.30	-0.7
1,837,877	-		Echvi_1597	0.30	-0.7
1,837,877	-		Echvi_1597	0.30	-0.3
1,837,877	-		Echvi_1597	0.30	+0.9
1,837,970	+		Echvi_1597	0.35	-0.3
1,837,971	-		Echvi_1597	0.35	-0.7